BDGP Sequence Production Resources |
Search the DGRC for SD14047
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 140 |
Well: | 47 |
Vector: | pOT2 |
Associated Gene/Transcript | RFeSP-RB |
Protein status: | SD14047.pep: gold |
Sequenced Size: | 848 |
Gene | Date | Evidence |
---|---|---|
RFeSP-RB | 2010-02-16 | Manual selection by Sue Celniker |
848 bp assembled on 2010-03-02
GenBank Submission: BT122041.1
> SD14047.complete CAGACGAAAACGACAAACGTCGAAATTTTCGTGATCATTTAATTTGATAG GAAAACATACAAAATGATGAACGCCGTGTCGCGTGCTTACGTCAGAGGCG GAGCCCAGGTCCTCTCCACGGGATTGAAGGCGAGCGGCGTGGCCGTCAAC TCGATGGCCAATCGCCAGGCACACACCGACCTGCAGGTGCCAGACTTCTC GGCATACCGCCGGGAGTCCGTGAAGGACAGTCGTCGTCGCAACGACACCG CCGAGGAGCGCAAGGCCTTCTCCTACTTGATGGTCGGCGCCGGAGCCGTG GGCGGTGCCTATGCGGCCAAGGGCCTGGTTAACACCTTCATCGGATCGAT GAGCGCCTCCGCCGAAGTGCTGGCCATGGCCAAGATCGAGATCAAGCTGT CCGACATCCCGGAGGGCAAGTCGGTTACTTTCAAGTGGCGCGGAAAGCCC CTGTTCATCCGCCACCGCACGGCCGCGGAAATCGAGACCGAGCGAAATGT GCCCACATCCACGCTGCGCGATCCGGAGGCTGATGATCAACGTGTGATCA AGCCCGAGTGGCTGGTGGTCATCGGAGTGTGCACGCATCTGGGCTGTGTG CCCATCGCGAACGCCGGCGACTGGGGTGGCTACTACTGCCCCTGCCACGG CTCCCACTACGACGCCTCCGGAAGGATCCGCAAGGGACCCGCGCCCCTCA ACTTGGAGGTGCCCACCCACGAGTTCCCCAACGAGGGTCTTCTCGTGGTC GGCTAGAGGAGCTGTTATCGTTTAAGCCCCCAACTGCATAGTGAATGGAT CGATGTAAATTAATAAATACAACCAAACAGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RFeSP-RB | 1088 | RFeSP-RB | 58..889 | 1..832 | 4145 | 99.8 | Plus |
RFeSP.a | 1092 | RFeSP.a | 58..893 | 1..832 | 4080 | 99.4 | Plus |
RFeSP-RA | 1143 | RFeSP-RA | 58..594 | 1..537 | 2670 | 99.8 | Plus |
RFeSP-RA | 1143 | RFeSP-RA | 650..944 | 538..832 | 1475 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 1612924..1613304 | 537..157 | 1845 | 99 | Minus |
chr2L | 23010047 | chr2L | 1612576..1612868 | 830..538 | 1435 | 99.3 | Minus |
chr2L | 23010047 | chr2L | 1613863..1614019 | 157..1 | 770 | 99.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 1613044..1613424 | 537..157 | 1905 | 100 | Minus |
2L | 23513712 | 2L | 1612694..1612988 | 832..538 | 1475 | 100 | Minus |
2L | 23513712 | 2L | 1613983..1614139 | 157..1 | 770 | 99.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 1612576..1612868 | 538..830 | 99 | <- | Minus |
chr2L | 1612924..1613303 | 158..537 | 98 | <- | Minus |
chr2L | 1613863..1614019 | 1..157 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RFeSP-RB | 1..693 | 64..756 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RFeSP-RB | 1..693 | 64..756 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RFeSP-RB | 1..693 | 64..756 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RFeSP-RB | 1..693 | 64..756 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RFeSP-RB | 44..873 | 1..830 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RFeSP-RB | 44..873 | 1..830 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RFeSP-RB | 22..851 | 1..830 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RFeSP-RB | 22..851 | 1..830 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1613983..1614139 | 1..157 | 99 | Minus | |
2L | 1612696..1612988 | 538..830 | 100 | <- | Minus |
2L | 1613044..1613423 | 158..537 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1613983..1614139 | 1..157 | 99 | Minus | |
2L | 1612696..1612988 | 538..830 | 100 | <- | Minus |
2L | 1613044..1613423 | 158..537 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1613983..1614139 | 1..157 | 99 | Minus | |
2L | 1612696..1612988 | 538..830 | 100 | <- | Minus |
2L | 1613044..1613423 | 158..537 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 1613983..1614139 | 1..157 | 99 | Minus | |
arm_2L | 1612696..1612988 | 538..830 | 100 | <- | Minus |
arm_2L | 1613044..1613423 | 158..537 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1612696..1612988 | 538..830 | 100 | <- | Minus |
2L | 1613044..1613423 | 158..537 | 100 | <- | Minus |
2L | 1613983..1614139 | 1..157 | 99 | Minus |
Translation from 63 to 755
> SD14047.pep MMNAVSRAYVRGGAQVLSTGLKASGVAVNSMANRQAHTDLQVPDFSAYRR ESVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGSMSASA EVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRTAAEIETERNVPTST LRDPEADDQRVIKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYD ASGRIRKGPAPLNLEVPTHEFPNEGLLVVG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14036-PA | 230 | GF14036-PA | 1..230 | 1..230 | 1126 | 89.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24583-PA | 230 | GG24583-PA | 1..230 | 1..230 | 1209 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10320-PA | 230 | GH10320-PA | 1..230 | 1..230 | 1081 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RFeSP-PE | 230 | CG7361-PE | 1..230 | 1..230 | 1199 | 100 | Plus |
RFeSP-PD | 230 | CG7361-PD | 1..230 | 1..230 | 1199 | 100 | Plus |
RFeSP-PB | 230 | CG7361-PB | 1..230 | 1..230 | 1199 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17080-PA | 227 | GI17080-PA | 1..227 | 1..230 | 1052 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14741-PA | 230 | GL14741-PA | 1..230 | 1..230 | 1034 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25273-PA | 230 | GA25273-PA | 1..230 | 1..230 | 1037 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16602-PA | 230 | GM16602-PA | 1..230 | 1..230 | 1225 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22901-PA | 249 | GD22901-PA | 1..218 | 1..218 | 1163 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10683-PA | 227 | GJ10683-PA | 1..227 | 1..230 | 1042 | 83.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14939-PA | 221 | GK14939-PA | 1..221 | 1..230 | 1039 | 83.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\RFeSP-PA | 230 | GE15522-PA | 1..230 | 1..230 | 1215 | 98.7 | Plus |
Translation from 63 to 755
> SD14047.hyp MMNAVSRAYVRGGAQVLSTGLKASGVAVNSMANRQAHTDLQVPDFSAYRR ESVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGSMSASA EVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRTAAEIETERNVPTST LRDPEADDQRVIKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYD ASGRIRKGPAPLNLEVPTHEFPNEGLLVVG*