BDGP Sequence Production Resources |
Search the DGRC for SD15945
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 159 |
Well: | 45 |
Vector: | pOT2 |
Associated Gene/Transcript | Rpp20-RA |
Protein status: | SD15945.pep: gold |
Sequenced Size: | 1261 |
Gene | Date | Evidence |
---|---|---|
Rpp20-RA | 2009-01-27 | EST screening |
1261 bp assembled on 2009-03-13
GenBank Submission: BT072833.1
> SD15945.complete CGATTCGGAATGGAGTCGCGAGTCCGAAACTGCGACACGCGCAGGTAAAT GGAAAACACAAGTCGCCTCCTCCGCCGCTGATGATGGGAAGCAATTATCC CGAGCACGGGACCAAGCCGAGATCCGCCAAATACCACAAACAACAGAACC ACCGAGTGGTGCGCAAGCAGCCGCCGCGTCCCGCTGTTAGCGACCGCCAC AACATCTACATCACCAGCAAGACAGACTTTAAGGCCCAGCAGCGCCGCTG CGAGGAGCTGATTAACTCCGGCGCCCACGAGATCTTTCTGCATTGCATGG GCTTCTCCGTAACCCGCGGCCTCAATATCGCCCTACGCCTCGTCCAGAAT TCTGACGGCGCCCTTAGCTACGCCATCAACACCTCCACCGTTCAGCTGGT GGACGAACTGCACCCGCTGTGCGATGCCGAGGACATAACCTTCCGCCAGC GCAACAACTCGGCCCTGCACATCAAGATCCTCAATAACAGTCTCTTCGAC ATCGCCGTGCCGCAACCGTCGCAGTCCCAGACGCAAGCCCAGTCCCTGGG CCAGTTCCGAGGCAAGGCGAAGGCCAGGCAGTAGCATGTTCAAACTCTCG GAGCTGGTGCGCTGGCTGGGGCTCACCGAGTTCGAGATTCTGGTCAATCT GTGCGGCCTGCTGGTGTTCACCATCACGCTGACCGTCAAGCTCCATCTGC AGGCCAGGGCCGGACCCGGTGGCATACTCCCGGAGCCCATGGGCGACTGG TTCACCGTCTTCAGCCCCCTGTTCTTCATCGACATCTGCAACGCGTACTT TTGCGTCATTGTGGGCATCCGCATGTACCTGGACTCTAACAACAAGCGCA AAGCCCTGCATCGCTTCATGTGGAGCACGTATTTCCTGGTGCTCATCGCC ATCTTCAAGTACCTGCTCTGCCTGAAGCTATCCAGCAAGACGGGCCTCGA GTATTCGGAGGTCTTCTCGCCGATCTTCGTTCTGTTGCAGCTCGTGGCTG TGCGCGCCTGCCAGTTGCCCAACTCCATCTAAACCATAGACGTAGTATAG CCCTAGTTCCGTATTATACATATATGTAACTATTCTGAAAGCCTTTAAAT CATTGGATTGGTAGTTATCTGTATACGCAATGTGGTACAATAATTTTTAA GCGGTACGAAATTTATCTTTCTGGATATAGCATATCTAATATATACGAAT TATATCTGATCTGATTCGGTATGAAGGACATACATACATAAAAAAAAAAA AAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 19633160..19633396 | 1..239 | 98 | -> | Plus |
chrX | 19633472..19634471 | 240..1239 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpp20-RA | 1..504 | 81..584 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpp20-RA | 1..504 | 81..584 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpp20-RA | 1..504 | 81..584 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpp20-RA | 1..504 | 81..584 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpp20-RA | 17..1242 | 1..1226 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33932-RA | 17..1242 | 1..1226 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpp20-RA | 19..1244 | 1..1226 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33932-RB | 19..1257 | 1..1239 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19744449..19744685 | 1..239 | 98 | -> | Plus |
X | 19744761..19745760 | 240..1239 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19744449..19744685 | 1..239 | 98 | -> | Plus |
X | 19744761..19745760 | 240..1239 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19744449..19744685 | 1..239 | 98 | -> | Plus |
X | 19744761..19745760 | 240..1239 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 19638482..19638718 | 1..239 | 98 | -> | Plus |
arm_X | 19638794..19639793 | 240..1239 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19752547..19752783 | 1..239 | 98 | -> | Plus |
X | 19752859..19753858 | 240..1239 | 100 | Plus |
Translation from 2 to 583
> SD15945.pep IRNGVASPKLRHAQVNGKHKSPPPPLMMGSNYPEHGTKPRSAKYHKQQNH RVVRKQPPRPAVSDRHNIYITSKTDFKAQQRRCEELINSGAHEIFLHCMG FSVTRGLNIALRLVQNSDGALSYAINTSTVQLVDELHPLCDAEDITFRQR NNSALHIKILNNSLFDIAVPQPSQSQTQAQSLGQFRGKAKARQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20215-PA | 168 | GF20215-PA | 1..168 | 28..193 | 545 | 68 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19253-PA | 167 | GG19253-PA | 1..167 | 27..193 | 742 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17693-PA | 193 | GH17693-PA | 1..152 | 28..174 | 580 | 71.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rpp20-PB | 167 | CG33931-PB | 1..167 | 27..193 | 869 | 100 | Plus |
Rpp20-PA | 167 | CG33931-PA | 1..167 | 27..193 | 869 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16100-PA | 163 | GI16100-PA | 1..163 | 28..190 | 563 | 64 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15016-PA | 192 | GL15016-PA | 1..155 | 28..174 | 552 | 69.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22553-PA | 192 | GA22553-PA | 1..155 | 28..174 | 561 | 69.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22990-PA | 166 | GM22990-PA | 1..166 | 28..193 | 848 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17463-PA | 166 | GD17463-PA | 1..166 | 28..193 | 845 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15750-PA | 189 | GJ15750-PA | 1..151 | 28..174 | 558 | 71.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16388-PA | 195 | GK16388-PA | 24..153 | 48..174 | 491 | 70 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15872-PA | 166 | GE15872-PA | 1..166 | 28..193 | 825 | 91.6 | Plus |
Translation from 585 to 1031
> SD15945.hyp MFKLSELVRWLGLTEFEILVNLCGLLVFTITLTVKLHLQARAGPGGILPE PMGDWFTVFSPLFFIDICNAYFCVIVGIRMYLDSNNKRKALHRFMWSTYF LVLIAIFKYLLCLKLSSKTGLEYSEVFSPIFVLLQLVAVRACQLPNSI*