BDGP Sequence Production Resources |
Search the DGRC for SD16010
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 160 |
Well: | 10 |
Vector: | pOT2 |
Associated Gene/Transcript | pirk-RA |
Protein status: | SD16010.pep: gold |
Preliminary Size: | 594 |
Sequenced Size: | 1321 |
Gene | Date | Evidence |
---|---|---|
CG15678 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15678 | 2002-05-18 | Blastp of sequenced clone |
CG15678 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15678 | 2008-04-29 | Release 5.5 accounting |
CG15678 | 2008-08-15 | Release 5.9 accounting |
CG15678 | 2008-12-18 | 5.12 accounting |
1321 bp (1321 high quality bases) assembled on 2002-05-18
GenBank Submission: AY119217
> SD16010.complete AGCGAGCGAGCAGTAAGCACGGCGAAAGCGATACCAGAGATCGCCAAACT CAACGCACAATAAAAGTTCAGAAAACAGAGGGAGTTCCCCTGGCGGAAGC AGACGATCCCCCAGCGCTGAATTGAATACAAAATCAACACACACAATTGG ATATCTTTGACCTTAGCCATCCGGATTGCTCATCATTCGGAGTCTTCCCC CAGCGACAGAGACGGAAATAGAGATAGGAAAAAGAGTTGGAGAATGAGCT AACCGACAGACTGGACGGTGATTTTTACGAGTGATTAGCAGCGGAAAGAA ACGATACCGGCGGTAATTCACACCAAAATGGGCGTTCGTGTGATAGAAAC CGATTCGGCGAGCGATTCGTATGACGATGACGAGTGCTCCACTTGCCAGA AAGAGCACGAGCAGGGTAAATCCCCCAATAAGAGCAAGAAAAGTTCCACG CCGCCGGAGACAACCATCTACGCCAGCAAGGATCTGGTGGGCAACTGCAA GGAGTACCGCATTGAGAACAACACGCGCGATCTCAGGATCATCGGCAATG GCAACCGCATACGTATTGTGAACAACTCCGGGCAACTGCAAGTAATCGGC AATAGCACCCGACTCAAGATTCAGAACAATAGCGGAGCCCTCAAGTACAC GGGTAACGACGGTAGGATCTACCTGGGCAGCAGCTCCACGCAGCAGGTGG TCGACTACACGGGCTGCAATGGACTGCTCAAGGTGGTCAAGTCCCTGGAT CTTAGCGGCGATGCCAAGAAAAGGCCCAGCTCTCGATCGAAAAACGCCAA GCCAACGCCAACGGATGCTGGCCAAGGCAAGTCCGGCGGCATTGAGATCG ACAGCAATCTAACGATACGGCACGGAGCCGGGAACATTGTGATCAAGAAT GCCATCAACGTGAGCATCTGAGAATCTTGAGCTCTCTAAGTCATCTTTGG CCAAAGATTAAGGATTAATGTAACGAAACTCTTGCCACCGAACGCAAAGG TTCCTATTGACTGCAAAATAGTCACTTAGTCTTAATGTGTCTTTCGACTG CTACCAATATTAACATCACCCTGCACATTCAGCAATGTCAAGTATTAAAC GCCACGTCGCTAGTCTAAAAATCCATTACTATTCACAAAACACACCCACT GATTAGGGAAATATATGTATTGTATGTATATGTTTAGTCGTAACGCAGTA GCACAGTGTGAACAAAGCCTAAACTTCATTCCGAGAATGAATAATCTGAT TAAAAAATACAACTATATGTCTAAATATAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pirk-RA | 1278 | pirk-RA | 1..1278 | 1..1278 | 6270 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 17547414..17548687 | 1278..5 | 6130 | 98.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 21660966..21662244 | 1279..1 | 6275 | 99.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 21662165..21663443 | 1279..1 | 6275 | 99.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17547414..17548690 | 1..1278 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15678-RA | 1..594 | 328..921 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pirk-RA | 1..594 | 328..921 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pirk-RA | 1..594 | 328..921 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15678-RA | 1..594 | 328..921 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pirk-RA | 1..594 | 328..921 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15678-RA | 1..1278 | 1..1278 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pirk-RA | 1..1278 | 1..1278 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pirk-RA | 24..1301 | 1..1278 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15678-RA | 1..1278 | 1..1278 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pirk-RA | 24..1301 | 1..1278 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21660967..21662244 | 1..1278 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21660967..21662244 | 1..1278 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21660967..21662244 | 1..1278 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17548472..17549749 | 1..1278 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21662166..21663443 | 1..1278 | 99 | Minus |
Translation from 327 to 920
> SD16010.pep MGVRVIETDSASDSYDDDECSTCQKEHEQGKSPNKSKKSSTPPETTIYAS KDLVGNCKEYRIENNTRDLRIIGNGNRIRIVNNSGQLQVIGNSTRLKIQN NSGALKYTGNDGRIYLGSSSTQQVVDYTGCNGLLKVVKSLDLSGDAKKRP SSRSKNAKPTPTDAGQGKSGGIEIDSNLTIRHGAGNIVIKNAINVSI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11631-PA | 201 | GF11631-PA | 1..201 | 1..197 | 634 | 75.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20757-PA | 195 | GG20757-PA | 1..195 | 1..197 | 799 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23040-PA | 196 | GH23040-PA | 1..196 | 1..197 | 558 | 62.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pirk-PB | 197 | CG15678-PB | 1..197 | 1..197 | 1012 | 100 | Plus |
pirk-PA | 197 | CG15678-PA | 1..197 | 1..197 | 1012 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21109-PA | 196 | GI21109-PA | 1..196 | 1..197 | 505 | 58.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11274-PA | 199 | GL11274-PA | 1..199 | 1..197 | 598 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13889-PA | 199 | GA13889-PA | 1..199 | 1..197 | 598 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15701-PA | 197 | GM15701-PA | 1..197 | 1..197 | 912 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25179-PA | 199 | GD25179-PA | 1..199 | 1..197 | 839 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20957-PA | 193 | GJ20957-PA | 1..193 | 1..197 | 584 | 68.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19575-PA | 200 | GK19575-PA | 1..200 | 1..197 | 541 | 58.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13689-PA | 197 | GE13689-PA | 1..197 | 1..197 | 838 | 87.8 | Plus |
Translation from 327 to 920
> SD16010.hyp MGVRVIETDSASDSYDDDECSTCQKEHEQGKSPNKSKKSSTPPETTIYAS KDLVGNCKEYRIENNTRDLRIIGNGNRIRIVNNSGQLQVIGNSTRLKIQN NSGALKYTGNDGRIYLGSSSTQQVVDYTGCNGLLKVVKSLDLSGDAKKRP SSRSKNAKPTPTDAGQGKSGGIEIDSNLTIRHGAGNIVIKNAINVSI*