BDGP Sequence Production Resources |
Search the DGRC for SD16302
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 163 |
Well: | 2 |
Vector: | pOT2 |
Associated Gene/Transcript | Csat-RA |
Protein status: | SD16302.pep: gold |
Preliminary Size: | 1282 |
Sequenced Size: | 2061 |
Gene | Date | Evidence |
---|---|---|
CG2675 | 2002-01-01 | Sim4 clustering to Release 2 |
CG2675 | 2002-12-11 | Blastp of sequenced clone |
CG2675 | 2003-01-01 | Sim4 clustering to Release 3 |
Csat | 2008-04-29 | Release 5.5 accounting |
Csat | 2008-08-15 | Release 5.9 accounting |
Csat | 2008-12-18 | 5.12 accounting |
2061 bp (2061 high quality bases) assembled on 2002-12-11
GenBank Submission: BT003169
> SD16302.complete AAAAGCCGCCGCTGGCAGAAGCTTCTGGCTCTGATTGTTGTTTACGTGTC GCCCGGTCCGGTGGAGTCGTCTTCATTTGCGCTCTTCTGCTTTTCTGGCC AACTTGAAGGGAACGAACTGTGGAACGGAACGGCCCGCCGACAACTGATC TTGGCCAGGAACGGAGTCTTTGTGTACCCCCAACTACGGCGTTTTGTTTG CCTTCGGTTTCTATTTGGTTTTGGAGTTGAGACAATAGAGCTAGAAGCGT AGCACCATGAATAGCATACACATGAACGCCAATACGCTGAAGTACATCAG CCTGCTGACGCTGACCCTGCAGAATGCCATCCTGGGCCTCAGCATGCGCT ACGCCCGCACCCGGCCAGGCGACATCTTCCTCAGCTCCACGGCCGTACTC ATGGCAGAGTTCGCCAAACTGATCACGTGCCTGTTCCTGGTCTTCAACGA GGAGGGCAAGGATGCCCAGAAGTTTGTACGCTCGCTGCACAAGACCATCA TTGCGAATCCCATGGACACGCTGAAGGTGTGTGTCCCCTCGCTGGTCTAT ATCGTTCAGAACAATCTGCTGTACGTCTCTGCGTCCCATTTGGATGCGGC CACCTACCAGGTGACGTACCAGCTGAAGATTCTCACCACGGCCATGTTCG CGGTTGTCATTCTGCGCCGCAAGCTGCTGAACACGCAGTGGGGTGCGCTG CTGCTCCTGGTGATGGGCATCGTCCTGGTGCAGTTGGCCCAAACGGAGGG TCCGACGAGTGGCTCAGCCGGTGGTGCCGCAGCTGCAGCCACGGCCGCCT CCTCTGGCGGTGCTCCCGAGCAGAACAGGATGCTCGGACTGTGGGCCGCA CTGGGCGCCTGCTTCCTCTCCGGATTCGCGGGCATCTACTTTGAGAAGAT CCTCAAGGGTGCCGAGATCTCCGTGTGGATGAGGAATGTGCAGTTGAGTC TGCTCAGCATTCCCTTCGGCCTGCTCACCTGTTTCGTTAACGACGGCAGT AGGATCTTCGACCAGGGATTCTTCAAGGGCTACGATCTGTTTGTCTGGTA CCTGGTCCTGCTGCAGGCCGGCGGTGGATTGATCGTTGCCGTGGTGGTCA AGTACGCGGATAACATTCTCAAGGGCTTCGCCACCTCGCTGGCCATCATC ATCTCGTGCGTGGCCTCCATATACATCTTCGACTTCAATCTCACGCTGCA GTTCAGCTTCGGAGCTGGCCTGGTCATCGCCTCCATCTTTCTCTACGGCT ACGATCCGGCCAGGTCGGCGCCGAAGCCAACTATGCACGGTCCTGGCGGC GATGAGGAGAAGCTACTGCCGCGCGTCTAGCTCTGGAGGAATCCGGATCT GCCAACAGTATTTGTCCGTAACCCGGAGGCCGCCGTTCGGTAATTGCTCT GGTGTATCCGGTGCATCCGGTGTCCTTGATATTCCCCACGTTTTGTGTGT ATATATATTAGGGTGGATATTAACGTCTGGACAATTCGTAGCACTTTCTG TTGAGACGATAATTGTAATGTAAAGCAGCGATAAGAATACTTAATGATTT ATGTAATTTAAATGTATTTAGGGTATTCACTAGCGAAACTAAAATGTAGT TAATGAAATGATGCAGCTTGAATGCACGTTTTATTGATCATTTTAATTGT TACTTTGCGAATGCTGAGGAATGCCAGCAGTATTTACTGGACAACACCAC ACATACCGTGCCTATCCTTTTGTAAATATCCACTTGCACTCAAGTTTAGA CTAAGATTTGTAACGATTTATAGTTTTCAAGTTACACTTGATGTTCGGCC AATTCACAGCCACAACTACTTTTGTTCGAATTTTTTTTTTAGATCATATA TATGTATATATATTTACTTGAATGTGCATTATTTATTCATCGCCAATTAC TTTATTTTTGAGAAATCCTAGGTTGAGCCAGCCCACACTTATATATTTGT ATTTGAACTAAAGTCGCATTACTCGCACAGTGTTTTAAGAGTGATTCCAT ATCGATATGTTTCATTTCCTTTGAATAAATATTAGACGAATAAAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 2594940..2596592 | 2041..392 | 8020 | 99.2 | Minus |
chrX | 22417052 | chrX | 2597321..2597592 | 272..1 | 1285 | 98.2 | Minus |
chrX | 22417052 | chrX | 2597104..2597223 | 392..273 | 600 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy6 | 7826 | gypsy6 GYPSY6 7826bp | 923..1002 | 1862..1940 | 118 | 62.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 2594940..2596591 | 393..2041 | 99 | <- | Minus |
chrX | 2597104..2597223 | 273..392 | 100 | <- | Minus |
chrX | 2597321..2597592 | 1..272 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Csat-RA | 1..1074 | 257..1330 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Csat-RA | 1..1074 | 257..1330 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Csat-RA | 1..1074 | 257..1330 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Csat-RA | 1..1074 | 257..1330 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Csat-RA | 1..1074 | 257..1330 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Csat-RA | 1..2044 | 1..2041 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Csat-RA | 1..2044 | 1..2041 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Csat-RA | 1..2013 | 32..2041 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Csat-RA | 1..2044 | 1..2041 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Csat-RC | 77..2120 | 1..2041 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2701124..2702775 | 393..2041 | 99 | <- | Minus |
X | 2703288..2703407 | 273..392 | 100 | <- | Minus |
X | 2703505..2703776 | 1..272 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2701124..2702775 | 393..2041 | 99 | <- | Minus |
X | 2703288..2703407 | 273..392 | 100 | <- | Minus |
X | 2703505..2703776 | 1..272 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2701124..2702775 | 393..2041 | 99 | <- | Minus |
X | 2703288..2703407 | 273..392 | 100 | <- | Minus |
X | 2703505..2703776 | 1..272 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 2597321..2597440 | 273..392 | 100 | <- | Minus |
arm_X | 2597538..2597809 | 1..272 | 98 | Minus | |
arm_X | 2595157..2596808 | 393..2041 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2711386..2711505 | 273..392 | 100 | <- | Minus |
X | 2711603..2711874 | 1..272 | 98 | Minus | |
X | 2709222..2710873 | 393..2041 | 99 | <- | Minus |
Translation from 256 to 1329
> SD16302.pep MNSIHMNANTLKYISLLTLTLQNAILGLSMRYARTRPGDIFLSSTAVLMA EFAKLITCLFLVFNEEGKDAQKFVRSLHKTIIANPMDTLKVCVPSLVYIV QNNLLYVSASHLDAATYQVTYQLKILTTAMFAVVILRRKLLNTQWGALLL LVMGIVLVQLAQTEGPTSGSAGGAAAAATAASSGGAPEQNRMLGLWAALG ACFLSGFAGIYFEKILKGAEISVWMRNVQLSLLSIPFGLLTCFVNDGSRI FDQGFFKGYDLFVWYLVLLQAGGGLIVAVVVKYADNILKGFATSLAIIIS CVASIYIFDFNLTLQFSFGAGLVIASIFLYGYDPARSAPKPTMHGPGGDE EKLLPRV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22488-PA | 381 | GF22488-PA | 30..381 | 6..357 | 1570 | 88.7 | Plus |
Dana\GF15719-PA | 385 | GF15719-PA | 48..375 | 45..356 | 223 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18613-PA | 357 | GG18613-PA | 1..357 | 1..357 | 1823 | 97.5 | Plus |
Dere\GG25047-PA | 387 | GG25047-PA | 48..377 | 45..356 | 229 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11945-PA | 358 | GH11945-PA | 8..358 | 6..357 | 1506 | 86.8 | Plus |
Dgri\GH11488-PA | 395 | GH11488-PA | 47..349 | 45..334 | 222 | 24.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ugalt-PC | 357 | CG2675-PC | 1..357 | 1..357 | 1799 | 100 | Plus |
Ugalt-PA | 357 | CG2675-PA | 1..357 | 1..357 | 1799 | 100 | Plus |
Ugalt-PB | 368 | CG2675-PB | 17..368 | 6..357 | 1768 | 99.7 | Plus |
senju-PA | 388 | CG14040-PA | 48..349 | 45..334 | 229 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14732-PA | 362 | GI14732-PA | 2..362 | 3..357 | 1467 | 86.1 | Plus |
Dmoj\GI16983-PA | 392 | GI16983-PA | 48..347 | 45..334 | 209 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19812-PA | 360 | GL19812-PA | 2..360 | 3..357 | 1601 | 87.5 | Plus |
Dper\GL26549-PA | 388 | GL26549-PA | 48..346 | 45..334 | 210 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15422-PA | 367 | GA15422-PA | 12..367 | 6..357 | 1582 | 87.4 | Plus |
Dpse\GA12720-PA | 392 | GA12720-PA | 48..350 | 45..334 | 215 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18861-PA | 357 | GM18861-PA | 1..357 | 1..357 | 1844 | 98.9 | Plus |
Dsec\GM18522-PA | 388 | GM18522-PA | 48..378 | 45..356 | 219 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16360-PA | 357 | GD16360-PA | 1..357 | 1..357 | 1857 | 99.4 | Plus |
Dsim\GD23318-PA | 2092 | GD23318-PA | 1752..2053 | 45..334 | 232 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19143-PA | 358 | GJ19143-PA | 2..358 | 3..357 | 1477 | 88 | Plus |
Dvir\GJ17230-PA | 392 | GJ17230-PA | 48..381 | 45..356 | 242 | 26.5 | Plus |
Translation from 256 to 1329
> SD16302.hyp MNSIHMNANTLKYISLLTLTLQNAILGLSMRYARTRPGDIFLSSTAVLMA EFAKLITCLFLVFNEEGKDAQKFVRSLHKTIIANPMDTLKVCVPSLVYIV QNNLLYVSASHLDAATYQVTYQLKILTTAMFAVVILRRKLLNTQWGALLL LVMGIVLVQLAQTEGPTSGSAGGAAAAATAASSGGAPEQNRMLGLWAALG ACFLSGFAGIYFEKILKGAEISVWMRNVQLSLLSIPFGLLTCFVNDGSRI FDQGFFKGYDLFVWYLVLLQAGGGLIVAVVVKYADNILKGFATSLAIIIS CVASIYIFDFNLTLQFSFGAGLVIASIFLYGYDPARSAPKPTMHGPGGDE EKLLPRV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Csat-PC | 357 | CG2675-PC | 1..357 | 1..357 | 1799 | 100 | Plus |
Csat-PA | 357 | CG2675-PA | 1..357 | 1..357 | 1799 | 100 | Plus |
Csat-PB | 368 | CG2675-PB | 17..368 | 6..357 | 1768 | 99.7 | Plus |
CG14040-PA | 388 | CG14040-PA | 48..349 | 45..334 | 229 | 25.9 | Plus |