BDGP Sequence Production Resources |
Search the DGRC for SD16942
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 169 |
Well: | 42 |
Vector: | pOT2 |
Associated Gene/Transcript | BEAF-32-RA |
Protein status: | SD16942.pep: gold |
Sequenced Size: | 1166 |
Gene | Date | Evidence |
---|---|---|
BEAF-32-RA | 2009-06-15 | Manual selection by Joe Carlson |
1166 bp assembled on 2009-10-19
GenBank Submission: BT100127.1
> SD16942.complete TGTAATTTGGGTTTGTTTTCTTCTTGGCAAACCGAATTACCACCGCAAAT CGAACAACCGATACACCACGATGCATGTTGAAAAGAAATCAGAGCTTCGT AGCCTACTAAAATCCGGGGACAAGCGTTGCAAACTCGTTGAGCCCAGGAA CACCAAAAGCTGCGTCTGGAGGTTTTTCAATCTCGTCCAGTGCGACGACC ACATAGAGCCGTACGCCTGCTGCAAAACCTGTGGCGATCTGTTATCCTAC AGCGGCAAAACTGGAACCGGATCCCTGCTACGGCACCGATGTCTCCACTC CAGCAGCAGTAACGACAAAACCGTGCGGATTACCAAGGCCAAGACGCTGA GGGAGCCGCTGCGTGTGGCCAAGCCGAAGATCGAGTCGAACGTCGCCAAT TATCTGGGCGAGGCGGGCGCCCTGCCGCAAAAGTGGGAGGAGTACGAGCA GAACGATGAGATTAGCGAGGACATTAAGGACATCATATACAGCGAGGATC CACTGTGCTATAGTCCTATACACGTGATGGATGATGAGGGCCTGGATCAG CCTGAGAAGCAAGTGACCGTGCTAACCCATTCGACTTCACCAGCCGGTGG AAGTAGCAGGCCCATCGGTGTTGGTTCGGGCGTACAGGCTACTGTGGTGG CCTCCACGTCCTCCAGCAGCAGCTCGGCCAAGCAGCTGAAGAACAACCTG GAGACGTCCATCGAACGGCTGACCGCTGTCAGCGAACAGCTCAGCTACAT CATACAACAGAATCACGAGGAGCTCACCAAGGACGACGACTACTATTTTG CACTTAGCTTGGTGCCCGCAATGCGCCACCTTTCGCTCAGTCGGAAGATG TACGTGCGGTCCAAGATCCAGGATATACTGTTCAAGGAAAGTGAGGACTC AACGCTTGCCAAGGATGAGTAGGCGGTCCATTATATACATTTACCCAGAG GAATAATAAAACGAGGAACGAAGGAAACCATATGGTAAATGGGCAAATCA GCGTGTCGTAATCTAGGTTAATAATTATACATATGTTATGTATTCATTTA AATTATGCTCTTTTATCGATTGAAAATACTTACTTTGATTGTATATTTCC CAATTATATTTTACTTAAAACTCAAATAAAGCACTACAATAAATTAAAAA AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
BEAF-32-RA | 1241 | BEAF-32-RA | 83..1229 | 1..1147 | 5735 | 100 | Plus |
BEAF-32.a | 1561 | BEAF-32.a | 717..1550 | 314..1147 | 4170 | 100 | Plus |
BEAF-32.b | 1331 | BEAF-32.b | 487..1320 | 314..1147 | 4170 | 100 | Plus |
BEAF-32.a | 1561 | BEAF-32.a | 83..396 | 1..314 | 1570 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
blood | 7410 | blood BLOOD 7410bp | 6853..6960 | 1020..1131 | 117 | 61.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 10657814..10658127 | 1..314 | 98 | -> | Plus |
chr2R | 10659094..10659924 | 315..1145 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
BEAF-32-RA | 1..852 | 71..922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
BEAF-32-RA | 1..852 | 71..922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
BEAF-32-RA | 1..852 | 71..922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
BEAF-32-RA | 1..852 | 71..922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
BEAF-32-RA | 47..1191 | 1..1145 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
BEAF-32-RA | 47..1191 | 1..1145 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
BEAF-32-RA | 48..1192 | 1..1145 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
BEAF-32-RA | 48..1192 | 1..1145 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14770516..14770829 | 1..314 | 100 | -> | Plus |
2R | 14771800..14772630 | 315..1145 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14770516..14770829 | 1..314 | 100 | -> | Plus |
2R | 14771800..14772630 | 315..1145 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14770516..14770829 | 1..314 | 100 | -> | Plus |
2R | 14771800..14772630 | 315..1145 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 10658021..10658334 | 1..314 | 100 | -> | Plus |
arm_2R | 10659305..10660135 | 315..1145 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14771715..14772028 | 1..314 | 100 | -> | Plus |
2R | 14772999..14773829 | 315..1145 | 100 | Plus |
Translation from 0 to 921
> SD16942.hyp VIWVCFLLGKPNYHRKSNNRYTTMHVEKKSELRSLLKSGDKRCKLVEPRN TKSCVWRFFNLVQCDDHIEPYACCKTCGDLLSYSGKTGTGSLLRHRCLHS SSSNDKTVRITKAKTLREPLRVAKPKIESNVANYLGEAGALPQKWEEYEQ NDEISEDIKDIIYSEDPLCYSPIHVMDDEGLDQPEKQVTVLTHSTSPAGG SSRPIGVGSGVQATVVASTSSSSSSAKQLKNNLETSIERLTAVSEQLSYI IQQNHEELTKDDDYYFALSLVPAMRHLSLSRKMYVRSKIQDILFKESEDS TLAKDE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
BEAF-32-PA | 283 | CG10159-PA | 1..283 | 24..306 | 1460 | 100 | Plus |
BEAF-32-PC | 282 | CG10159-PC | 2..282 | 48..306 | 1034 | 76.2 | Plus |
BEAF-32-PB | 282 | CG10159-PB | 2..282 | 48..306 | 1034 | 76.2 | Plus |
Translation from 1 to 921
> SD16942.pep VIWVCFLLGKPNYHRKSNNRYTTMHVEKKSELRSLLKSGDKRCKLVEPRN TKSCVWRFFNLVQCDDHIEPYACCKTCGDLLSYSGKTGTGSLLRHRCLHS SSSNDKTVRITKAKTLREPLRVAKPKIESNVANYLGEAGALPQKWEEYEQ NDEISEDIKDIIYSEDPLCYSPIHVMDDEGLDQPEKQVTVLTHSTSPAGG SSRPIGVGSGVQATVVASTSSSSSSAKQLKNNLETSIERLTAVSEQLSYI IQQNHEELTKDDDYYFALSLVPAMRHLSLSRKMYVRSKIQDILFKESEDS TLAKDE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13135-PA | 355 | GF13135-PA | 1..355 | 24..306 | 888 | 54.8 | Plus |
Dana\GF20137-PA | 632 | GF20137-PA | 3..71 | 29..97 | 171 | 44.3 | Plus |
Dana\GF19648-PA | 147 | GF19648-PA | 3..71 | 29..97 | 162 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20480-PA | 283 | GG20480-PA | 1..283 | 24..306 | 1387 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21415-PA | 266 | GH21415-PA | 2..262 | 48..301 | 594 | 49.6 | Plus |
Dgri\GH21414-PA | 81 | GH21414-PA | 1..79 | 24..102 | 404 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
BEAF-32-PA | 283 | CG10159-PA | 1..283 | 24..306 | 1460 | 100 | Plus |
BEAF-32-PC | 282 | CG10159-PC | 2..282 | 48..306 | 1034 | 76.2 | Plus |
BEAF-32-PB | 282 | CG10159-PB | 2..282 | 48..306 | 1034 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18590-PA | 265 | GI18590-PA | 2..260 | 48..300 | 579 | 49.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11437-PA | 278 | GL11437-PA | 1..278 | 24..306 | 1133 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10120-PA | 278 | GA10120-PA | 1..278 | 24..306 | 1127 | 75.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21570-PA | 283 | GM21570-PA | 1..283 | 24..306 | 1475 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11076-PA | 283 | GD11076-PA | 1..283 | 24..306 | 1477 | 98.2 | Plus |
Dsim\GD15413-PA | 246 | GD15413-PA | 45..246 | 105..306 | 1037 | 98 | Plus |
Dsim\GD22318-PA | 219 | GD22318-PA | 1..129 | 24..154 | 463 | 69.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20389-PA | 341 | GJ20389-PA | 1..336 | 24..300 | 772 | 52 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22912-PA | 278 | GK22912-PA | 2..278 | 48..306 | 554 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13610-PA | 284 | GE13610-PA | 1..284 | 24..306 | 1368 | 94.4 | Plus |