BDGP Sequence Production Resources |
Search the DGRC for SD16985
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 169 |
Well: | 85 |
Vector: | pOT2 |
Associated Gene/Transcript | EndoGI-RA |
Protein status: | SD16985.pep: gold |
Preliminary Size: | 1154 |
Sequenced Size: | 1390 |
Gene | Date | Evidence |
---|---|---|
CG4930 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4930 | 2002-05-18 | Blastp of sequenced clone |
CG4930 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4930 | 2008-04-29 | Release 5.5 accounting |
CG4930 | 2008-08-15 | Release 5.9 accounting |
CG4930 | 2008-12-18 | 5.12 accounting |
1390 bp (1390 high quality bases) assembled on 2002-05-18
GenBank Submission: AY119226
> SD16985.complete AGCAAGCGGCGATCTGAATTAGTCATCTTATCTCTTTCCGACAGAAGTGA CGATCAATAGCCCAACGATTTTAAACGCTTTACTTCGAAGAACCTTAAAT CGCCAATTTATCCAGAGGGGCATGTCCAAGCGCAAGGCCGAGGACACACA ATCCGACAAAATGGCAACGGCCGAGAAAGTAGCACAGAACGATTACACCA TTGGCCTGGTGGATCCCGTTAAGGATTACCAAAAGCTTATCGAAACACGC GTGCAGGTAGACGAAATCGTGGATGATGATGTCACCAAGGAGAATTTCGA TCGAACGGCTGCAGCGGCGCGTGACGTCATCTGGCGGCTGTTATTCGACG AGGCCGGTACCTCGCAATCGAACACAGAGAAGGCCAGCCAATTGCTGGAG GAATACCGTGGTGACGCCTGCTTCTACGACCCGACGCCGTACAACGAATG GATTGTCAAGCTGAGGGATGAGGTTCTAAAGAAGGAACTCCTCGACTTTT GGCGCGATGTGCTGGTGAAGAAGCAACTCGGTCCCTGTTGGTCACGCGAC AGTGATCTCTTTGACAGCGACGACACCCCGCCATTGGAGTTCTATGCCCA TGCCGGTTGTACCGCTCCATTTGCAGCCAGCTTAAAGGTGCGCGCAGCAC TCGAGGAGCAGGCTTCGCTGGATCAGGATGGGCCAGCGACGCCTACAACT CCGGGTGAACTGAGTGCCGATGATGCCGCCGCTCTGTCTGGCGAATTTGA GGCCACCCTGACCAAGGAAAATCCGCTCGAGGAATACCGAACTCTAATGA AGCGCTTTGTTCTGACCAAAATCATCGTTCCGGACAGCGTTCACCAGGCC AGCGTGAAGAAGATAGCGGCAGCCGCCAGGGAGATAATCTGGAAGCTGCT CTTCGATGGCACACCCTCAGCGGAGGATCAAAACAAGGCCGCCGAGCTGC TGCAGGAGTACAAGGGTGATGCTGGTTTCTATGGGCCCGACGACTACAAC AGTTGGATTTTCAATCTGAGGGATGAGGTTCTCACCAAAGAGCTTCTCGA CTTTTGGCGCGACAAGATGGTGAAAATGGAACTTGGTCCCAGTTGCGCCC GCGATTCCGACTATTACGACAACGAGGATCCGCTGCCATTCGAGTTTTAC GAAAAGGCTGGTTGCAAGGCTCCCTTTGAAGGACCTGTAAATGATGATTA GTAGTGCATCTTTCATGACTGAAGGATTGTTTCCTTATGTACTAAAACAC CTATTCTGGTCGTAATCTCTGAAGGCACACACAGTAAAGCATTTCAATAT CTGAATTATGTTTCGAAATGTTAGAAATTGTTTAAAAATGAATAAAATGA TAAGTATTTTATAACTGTTCTCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 16257101..16258289 | 184..1372 | 5945 | 100 | Plus |
chr2L | 23010047 | chr2L | 16256849..16257035 | 1..187 | 920 | 99.5 | Plus |
chr2L | 23010047 | chr2L | 16257366..16257457 | 1004..1095 | 205 | 81.5 | Plus |
chr2L | 23010047 | chr2L | 16257921..16258012 | 449..540 | 205 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 16258245..16259438 | 184..1377 | 5970 | 100 | Plus |
2L | 23513712 | 2L | 16257993..16258179 | 1..187 | 920 | 99.5 | Plus |
2L | 23513712 | 2L | 16258510..16258601 | 1004..1095 | 205 | 81.5 | Plus |
2L | 23513712 | 2L | 16259065..16259156 | 449..540 | 205 | 81.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 16256849..16257035 | 1..187 | 99 | -> | Plus |
chr2L | 16257105..16258289 | 188..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4930-RA | 1..1080 | 122..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
EndoGI-RA | 1..1080 | 122..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
EndoGI-RA | 1..1080 | 122..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4930-RA | 1..1080 | 122..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
EndoGI-RA | 1..1080 | 122..1201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4930-RA | 1..1372 | 1..1372 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
EndoGI-RA | 1..1372 | 1..1372 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
EndoGI-RA | 1..1360 | 13..1372 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4930-RA | 1..1372 | 1..1372 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
EndoGI-RA | 1..1360 | 13..1372 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16257993..16258179 | 1..187 | 99 | -> | Plus |
2L | 16258249..16259433 | 188..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16257993..16258179 | 1..187 | 99 | -> | Plus |
2L | 16258249..16259433 | 188..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16257993..16258179 | 1..187 | 99 | -> | Plus |
2L | 16258249..16259433 | 188..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 16257993..16258179 | 1..187 | 99 | -> | Plus |
arm_2L | 16258249..16259433 | 188..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16258249..16259433 | 188..1372 | 100 | Plus | |
2L | 16257993..16258179 | 1..187 | 99 | -> | Plus |
Translation from 121 to 1200
> SD16985.pep MSKRKAEDTQSDKMATAEKVAQNDYTIGLVDPVKDYQKLIETRVQVDEIV DDDVTKENFDRTAAAARDVIWRLLFDEAGTSQSNTEKASQLLEEYRGDAC FYDPTPYNEWIVKLRDEVLKKELLDFWRDVLVKKQLGPCWSRDSDLFDSD DTPPLEFYAHAGCTAPFAASLKVRAALEEQASLDQDGPATPTTPGELSAD DAAALSGEFEATLTKENPLEEYRTLMKRFVLTKIIVPDSVHQASVKKIAA AAREIIWKLLFDGTPSAEDQNKAAELLQEYKGDAGFYGPDDYNSWIFNLR DEVLTKELLDFWRDKMVKMELGPSCARDSDYYDNEDPLPFEFYEKAGCKA PFEGPVNDD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14961-PA | 358 | GF14961-PA | 1..358 | 1..358 | 1361 | 73.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25195-PA | 360 | GG25195-PA | 1..359 | 1..359 | 1779 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13511-PA | 362 | GH13511-PA | 1..361 | 1..358 | 1112 | 58.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
EndoGI-PC | 359 | CG4930-PC | 1..359 | 1..359 | 1890 | 100 | Plus |
EndoGI-PB | 359 | CG4930-PB | 1..359 | 1..359 | 1890 | 100 | Plus |
EndoGI-PA | 359 | CG4930-PA | 1..359 | 1..359 | 1890 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10268-PA | 343 | GI10268-PA | 14..343 | 22..355 | 1082 | 64.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25983-PA | 370 | GL25983-PA | 1..369 | 1..357 | 1245 | 64.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18533-PA | 370 | GA18533-PA | 1..369 | 1..357 | 1245 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18658-PA | 336 | GM18658-PA | 1..336 | 1..359 | 1692 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24044-PA | 359 | GD24044-PA | 1..359 | 1..359 | 1846 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18019-PA | 346 | GJ18019-PA | 14..344 | 21..355 | 1055 | 60 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18285-PA | 518 | GK18285-PA | 173..516 | 13..359 | 1066 | 59.2 | Plus |
Dwil\GK18285-PA | 518 | GK18285-PA | 1..327 | 1..352 | 897 | 51.3 | Plus |
Dwil\GK18285-PA | 518 | GK18285-PA | 344..512 | 7..170 | 332 | 44.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21376-PA | 358 | GE21376-PA | 1..358 | 1..359 | 1717 | 91.1 | Plus |
Translation from 121 to 1200
> SD16985.hyp MSKRKAEDTQSDKMATAEKVAQNDYTIGLVDPVKDYQKLIETRVQVDEIV DDDVTKENFDRTAAAARDVIWRLLFDEAGTSQSNTEKASQLLEEYRGDAC FYDPTPYNEWIVKLRDEVLKKELLDFWRDVLVKKQLGPCWSRDSDLFDSD DTPPLEFYAHAGCTAPFAASLKVRAALEEQASLDQDGPATPTTPGELSAD DAAALSGEFEATLTKENPLEEYRTLMKRFVLTKIIVPDSVHQASVKKIAA AAREIIWKLLFDGTPSAEDQNKAAELLQEYKGDAGFYGPDDYNSWIFNLR DEVLTKELLDFWRDKMVKMELGPSCARDSDYYDNEDPLPFEFYEKAGCKA PFEGPVNDD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
EndoGI-PC | 359 | CG4930-PC | 1..359 | 1..359 | 1890 | 100 | Plus |
EndoGI-PB | 359 | CG4930-PB | 1..359 | 1..359 | 1890 | 100 | Plus |
EndoGI-PA | 359 | CG4930-PA | 1..359 | 1..359 | 1890 | 100 | Plus |