SD17750.complete Sequence
566 bp (566 high quality bases) assembled on 2002-05-18
GenBank Submission: AY119231
> SD17750.complete
AAAAGCGGATGCTTGATGTGCATTAAGCCCGCTAATTACAAGTGGACGTA
ATGTGTGCATTTGCAACGCATTTGCTGAAGTGCGGGCGCCACGGTTTTCA
AGTGGTTAATCCACCACGCGCTTCCGCTCTTCACTTAATACGCGCTCTTC
CGGCTCTCTTAAAAGGACCAAGGCGAAGAGAATTGGGGCGATGGTTTCTG
CGCCGACAGCCTGCGCCTGAGTCCTTGGCCGCGGCGGCAGAAGACCAAAG
CAGCACAACCAGCAGCATCCGAGTGCGAAGCAACCAGCATCCAAAACCGA
ATCCAAAACTCCGGCTCAGTGTGAATTTGCGACTCGAGAGCGACGGCGGC
TCAAAGGAAACTTGGCTCGGAAAGTGTCTCGAGTGAGTGAAATGCCAAGC
TGAGAAGTGGAGAAACCAAGTGCTAAAGCAAAAGTTTACAACCAAATAAT
AATACCAATGTAATACAAAGCAAACGAAAGTGTTCAGCAACAAACATTCC
TCGCCCCGGTCACTGGATCAGGATATATATATATACACATACATATAGCA
AAAAAAAAAAAAAAAA
SD17750.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:54:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MB6.chr3R.pasa.10627.a | 549 | MB6.chr3R.pasa.10627.a | 1..549 | 1..549 | 2730 | 99.8 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:12:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chr3R | 27901430 | chr3R | 14753190..14753559 | 1..370 | 1835 | 99.7 | Plus |
| chr3R | 27901430 | chr3R | 14755138..14755318 | 369..549 | 890 | 99.4 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:56:36 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:12:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18929196..18929565 | 1..370 | 1850 | 100 | Plus |
| 3R | 32079331 | 3R | 18931143..18931335 | 369..561 | 950 | 99.5 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:14:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 31820162 | 3R | 18670027..18670396 | 1..370 | 1850 | 100 | Plus |
| 3R | 31820162 | 3R | 18671974..18672166 | 369..561 | 950 | 99.4 | Plus |
Blast to na_te.dros performed on 2019-03-16 13:12:03 has no hits.
SD17750.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:13:05 Download gff for
SD17750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chr3R | 14753190..14753558 | 1..369 | 99 | -> | Plus |
| chr3R | 14755139..14755318 | 370..549 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 21:34:28 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:25:44 Download gff for
SD17750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42613-RH | 1..549 | 1..549 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 21:34:28 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:15:16 Download gff for
SD17750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42613-RH | 1..549 | 1..549 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:13:05 Download gff for
SD17750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18929196..18929564 | 1..369 | 100 | -> | Plus |
| 3R | 18931144..18931323 | 370..549 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:13:05 Download gff for
SD17750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18929196..18929564 | 1..369 | 100 | -> | Plus |
| 3R | 18931144..18931323 | 370..549 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:13:05 Download gff for
SD17750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18929196..18929564 | 1..369 | 100 | -> | Plus |
| 3R | 18931144..18931323 | 370..549 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:25:44 Download gff for
SD17750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14754918..14755286 | 1..369 | 100 | -> | Plus |
| arm_3R | 14756866..14757045 | 370..549 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:25:44 Download gff for
SD17750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14754918..14755286 | 1..369 | 100 | -> | Plus |
| arm_3R | 14756866..14757045 | 370..549 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:16:06 Download gff for
SD17750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18670027..18670395 | 1..369 | 100 | -> | Plus |
| 3R | 18671975..18672154 | 370..549 | 99 | | Plus |
SD17750.pep Sequence
Translation from 50 to 385
> SD17750.pep
MCAFATHLLKCGRHGFQVVNPPRASALHLIRALPALLKGPRRRELGRWFL
RRQPAPESLAAAAEDQSSTTSSIRVRSNQHPKPNPKLRLSVNLRLESDGG
SKETWLGKCLE*
Sequence SD17750.pep has no blast hits.
SD17750.hyp Sequence
Translation from 50 to 385
> SD17750.hyp
MCAFATHLLKCGRHGFQVVNPPRASALHLIRALPALLKGPRRRELGRWFL
RRQPAPESLAAAAEDQSSTTSSIRVRSNQHPKPNPKLRLSVNLRLESDGG
SKETWLGKCLE*
Sequence SD17750.hyp has no blast hits.
