BDGP Sequence Production Resources |
Search the DGRC for SD17981
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 179 |
Well: | 81 |
Vector: | pOT2 |
Associated Gene/Transcript | CG42512-RA |
Protein status: | SD17981.pep: gold |
Sequenced Size: | 1801 |
Gene | Date | Evidence |
---|---|---|
CG42512 | 2011-02-22 | Manual selection by Sue Celniker |
1801 bp assembled on 2011-03-18
GenBank Submission: BT126151.1
> SD17981.complete CTCGTGTTATCGAAAGTTGTGTTGAAATTTCAGAAGTCATATTAAATTTG TTTAAATACGCCGATGGGGACCGTTTTATTATGGAGAACAAAAATGATAT AAAAGAAATGGACCTGGGCCTATCTCGAGCAGATATGTTGGAACAGCTCG AAAAAAGGCGAATATTTCTGGGCGATGGCAAGGATATGCCGCTGGATCGT CTGGAGGATATCTACCGCAATTACATAGTTCCCAAGCCAAAAAGAGAGCG CAAGCCGCGCAATCCAAGTCCCGATCCCAATTTCAATCCCATTGAAATAG AGCAGCTAGCGGAGCGCATCAAGTCGGTTGTCATAGTGGGACAGAAACGA GCGCATGCAGAGAATAAGAGCGACGACCAGGCCAAGCAAATCAAGATGGA CCTGGACTGACCTCATGCCGTTTGGCGATAGCCAATAATGGCTTTCCAAT CACACTCTCAGCTTGACCAGTTAGCAAACAAAAGCGGCCAGCAAGATGAT CCAGCTGCTCCAGTTGCTTCTATGTACTATTCCACTCGTTGTGGGCGAGG TTCTGCCCCTGCAACTCGATTTGGACAACAGTCAAATTACCATACGGCGA AGTGCCAGTCGCGATGACAAATTGCAGGTATTCCACAGCATCTGGGGCGC CATTCGCTCCGACTTCGCCACCGATACGGACAAGGTGAAGGGCCTGTACA GTCAGCTGGGCGGATTTATTCGCGACGATGTGCAGTGCAGCAGCGGCTCC ACGGGTCGATCTGCCTGCGAGCTGCAGCAGGAGGTGCGACGCCACCTGCG GACCCTCATGGCCCAGCGGCTGGCCAATCTGTTGAACGCCGAGGAGAGCA TTCAGACATACGGTATGTACATAGCGGCCAGTGTGGAGCCCGCCCTGGTC AGGGACATTCTGGTGCACGCCATCGAGGACGTGTACTTCCATCGACCGCT GGAGAAGCTGGTGCAGCAGCTGGAGCAACTGTACGCGGATCGCGACGAGG TCAACTTTCGCACGATGATCGAGGCGCAATTGGCGCTCTTCTGGCGCTAT CAGGCCATGCAGGACAGCAGCGAGGCGTACCTGTTCAACGTCGCGCACAT GGTCAGCAAGATCCGGAGCCATCACATGTACGCCAGCGTCGATGCGGATC TCCAGAAGCGAGTGGAGGCACTGAGCCAACGTCTGCCGCCCGTTCTAGAC TTGCTCTTCGATCCGCAGGGCTTCTGCCTGCTGAGTCGCTCCGATCGCGA GTACATCTACACGACCATAACGGACGAGTGGAACTACGGTCTGAATGGGC GGCAGATGTTCTCCTGGCGCGAGAAGAACTTCACCGATACCGCGGGCCTG ACACGCGCCTTCGTCCAGGAGCAGCACTCCACGCCGCTCTTCACGCTGCG TAGCGAGCTCTTCAAGTGGTACTACTTCGTCGATCCCAGCCAGGGCAATC GCTTGGCCGCCCTGCGCTCCGGCAGTCCCAGCTCCTCGACCAGCACCTGG ACCATCGCCTACGCGGGCGACGCACTCATCTTCCGGCAGCGCGAACTCAC GCTCTGTGCTGCCGAAAAGTTCGACGACGATCGTCGTCTGGTGAAGATGC TGCCCGGCCAGATGCACACGCCGCCATCGGAGGCTTGCCAGTGGCTACCG ATCGCCTGTGCTCCGCCAAAATGAGCGGGATGGCTGTACCCTGGAATGTT TGCAACAAATAAACTTATGCATTAGTGTATAAGTGTTTTTATTCCTAGCC AGTCATGAATAATTAAATATATAATTTGTATTAAAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 16541764..16542960 | 586..1782 | 5910 | 99.6 | Plus |
chrX | 22417052 | chrX | 16541272..16541701 | 156..585 | 2120 | 99.5 | Plus |
chrX | 22417052 | chrX | 16541061..16541215 | 1..155 | 775 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16541061..16541215 | 1..155 | 100 | -> | Plus |
chrX | 16541272..16541701 | 156..585 | 99 | -> | Plus |
chrX | 16541764..16542929 | 586..1751 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32573-RC | 1..1179 | 496..1674 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32573-RA | 1..1179 | 496..1674 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32573-RA | 1..1179 | 496..1674 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32573-RA | 1..1782 | 1..1782 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32573-RA | 1..1782 | 1..1782 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32573-RA | 1..1782 | 1..1782 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16651376..16651530 | 1..155 | 100 | -> | Plus |
X | 16651587..16652016 | 156..585 | 99 | -> | Plus |
X | 16652079..16653275 | 586..1782 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16651376..16651530 | 1..155 | 100 | -> | Plus |
X | 16651587..16652016 | 156..585 | 99 | -> | Plus |
X | 16652079..16653275 | 586..1782 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16651376..16651530 | 1..155 | 100 | -> | Plus |
X | 16651587..16652016 | 156..585 | 99 | -> | Plus |
X | 16652079..16653275 | 586..1782 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16545409..16545563 | 1..155 | 100 | -> | Plus |
arm_X | 16545620..16546049 | 156..585 | 99 | -> | Plus |
arm_X | 16546112..16547308 | 586..1782 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16659685..16660114 | 156..585 | 99 | -> | Plus |
X | 16660177..16661373 | 586..1782 | 99 | Plus | |
X | 16659474..16659628 | 1..155 | 100 | -> | Plus |
Translation from 80 to 409
> SD17981.pep MENKNDIKEMDLGLSRADMLEQLEKRRIFLGDGKDMPLDRLEDIYRNYIV PKPKRERKPRNPSPDPNFNPIEIEQLAERIKSVVIVGQKRAHAENKSDDQ AKQIKMDLD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22297-PA | 117 | GF22297-PA | 1..109 | 10..108 | 165 | 38.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19063-PA | 105 | GG19063-PA | 1..104 | 10..108 | 299 | 61.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24458-PA | 125 | GH24458-PA | 21..98 | 13..90 | 140 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG42512-PB | 100 | CG42512-PB | 1..100 | 10..109 | 515 | 100 | Plus |
CG42512-PA | 100 | CG42512-PA | 1..100 | 10..109 | 515 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12884-PA | 102 | GL12884-PA | 7..101 | 14..108 | 167 | 49 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22619-PA | 102 | GA22619-PA | 7..101 | 14..108 | 170 | 49 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13453-PA | 113 | GM13453-PA | 1..113 | 1..109 | 416 | 75.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17292-PA | 113 | GD17292-PA | 1..113 | 1..109 | 425 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17284-PA | 109 | GE17284-PA | 1..108 | 10..108 | 228 | 59.3 | Plus |
Translation from 495 to 1673
> SD17981.hyp MIQLLQLLLCTIPLVVGEVLPLQLDLDNSQITIRRSASRDDKLQVFHSIW GAIRSDFATDTDKVKGLYSQLGGYIRDDVQCSSGSTGRSACELQQEVRRH LRTLMAQRLANLLNAEESIQTYGMYIAASVEPALVRDILVHAIEDVYFHR PLEKLVQQLEQLYADRDEVSFRTMIEAQLALFWRYQAMQDSSEAYLFNVA HMVSKIRSHHMYASVDADLQKRVEALSQRLPPVLDLLFDPQGFCLLSRSD REYIYTTITDEWNYGLNGRQMFSWREKNFTDTAGLTRAFVQEQHSTPLFT LRSELFKWYYFVDPSQGNRLAALRSGSPSSSTSTWTIAYAGDALIFRQRE LTLCAAEKFDDDRRLVKMLPGQMHTPPSEACQWLPIACAPPK*