BDGP Sequence Production Resources |
Search the DGRC for SD18370
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 183 |
Well: | 70 |
Vector: | pOT2 |
Associated Gene/Transcript | PHGPx-RC |
Protein status: | SD18370.pep: gold |
Preliminary Size: | 2269 |
Sequenced Size: | 906 |
Gene | Date | Evidence |
---|---|---|
CG12013 | 2004-01-13 | Blastp of sequenced clone |
PHGPx | 2008-04-29 | Release 5.5 accounting |
PHGPx | 2008-08-15 | Release 5.9 accounting |
PHGPx | 2008-12-18 | 5.12 accounting |
906 bp (906 high quality bases) assembled on 2004-01-13
GenBank Submission: BT011331
> SD18370.complete CAGAATCTCGGCATTCGCATTCTATATTTGTATCCCTGCATCCGAAACTC GCAGCAGATCGTTGTGAAATCGTACACATAGTCGATATATAGCGCAGTAA TGGCTGGCCGCTCCATCGTCCACTTTTTTCTGGGGTCCGTGGCAATCGCC CTGGGATCGTACATCTACTTCACCATGCAAATCGACATGTCTGCTAACGG AGATTACAAGAACGCCGCCTCGATCTACGAGTTCACCGTGAAGGATACCC ATGGCAACGATGTTTCCCTGGAAAAGTACAAGGGCAAGGTGGTCCTGGTG GTGAACATCGCCTCCAAGTGCGGCCTGACCAAGAACAACTACGAGAAGCT GACGGATCTAAAGGAGAAGTACGGCGAGCGCGGCCTGGTGATCCTCAACT TCCCGTGCAATCAGTTTGGGTCCCAGATGCCGGAGGCCGATGGAGAGGCC ATGGTGTGCCACCTGCGCGACTCCAAGGCTGACATCGGCGAGGTGTTCGC CAAGGTCGATGTGAATGGAGACAATGCGGCGCCGCTGTACAAATACCTAA AGGCCAAGCAGACCGGCACCCTGGGCAGCGGAATCAAGTGGAACTTCACC AAGTTTCTGGTGAACAAGGAGGGCGTGCCCATCAACCGATATGCCCCGAC CACCGATCCCATGGACATCGCCAAGGACATTGAAAAGCTGCTGTAGATGT GCCCTAGACGTTAGCTGCTCTTTTGGACTGTGTTTTCGCGTAGCTTTAGC TTGTAACCGTCTGGCCACAGATAGTCTTGTGGCCGGCCACATGCACCGCA TGGTATATATATTGTCTACTCCTTACTGGTTTTGATTCCCACCCGCAAAC ATAATAAACGCCATTCGTGGTTACCACACTAAAAAAAAAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 3327656..3328033 | 503..880 | 1875 | 99.7 | Plus |
chr3L | 24539361 | chr3L | 3327267..3327592 | 181..506 | 1585 | 99.1 | Plus |
chr3L | 24539361 | chr3L | 3325943..3326122 | 1..180 | 900 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 3325943..3326122 | 1..180 | 100 | -> | Plus |
chr3L | 3327267..3327590 | 181..504 | 99 | -> | Plus |
chr3L | 3327658..3328033 | 505..880 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PHGPx-RC | 1..597 | 100..696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PHGPx-RC | 1..597 | 100..696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PHGPx-RC | 1..597 | 100..696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PHGPx-RC | 1..597 | 100..696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PHGPx-RC | 1..597 | 100..696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PHGPx-RC | 243..1122 | 1..880 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PHGPx-RC | 243..1122 | 1..880 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PHGPx-RC | 269..1148 | 1..880 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PHGPx-RC | 243..1122 | 1..880 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PHGPx-RC | 269..1148 | 1..880 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3326533..3326712 | 1..180 | 99 | -> | Plus |
3L | 3327860..3328183 | 181..504 | 100 | -> | Plus |
3L | 3328251..3328626 | 505..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3326533..3326712 | 1..180 | 99 | -> | Plus |
3L | 3327860..3328183 | 181..504 | 100 | -> | Plus |
3L | 3328251..3328626 | 505..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3326533..3326712 | 1..180 | 99 | -> | Plus |
3L | 3327860..3328183 | 181..504 | 100 | -> | Plus |
3L | 3328251..3328626 | 505..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 3326533..3326712 | 1..180 | 99 | -> | Plus |
arm_3L | 3327860..3328183 | 181..504 | 100 | -> | Plus |
arm_3L | 3328251..3328626 | 505..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3327860..3328183 | 181..504 | 100 | -> | Plus |
3L | 3328251..3328626 | 505..880 | 100 | Plus | |
3L | 3326533..3326712 | 1..180 | 99 | -> | Plus |
Translation from 99 to 695
> SD18370.pep MAGRSIVHFFLGSVAIALGSYIYFTMQIDMSANGDYKNAASIYEFTVKDT HGNDVSLEKYKGKVVLVVNIASKCGLTKNNYEKLTDLKEKYGERGLVILN FPCNQFGSQMPEADGEAMVCHLRDSKADIGEVFAKVDVNGDNAAPLYKYL KAKQTGTLGSGIKWNFTKFLVNKEGVPINRYAPTTDPMDIAKDIEKLL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10532-PA | 240 | GF10532-PA | 71..240 | 28..198 | 883 | 95.3 | Plus |
Dana\GF13732-PA | 195 | GF13732-PA | 40..191 | 42..198 | 452 | 53.5 | Plus |
Dana\GF20161-PA | 187 | GF20161-PA | 5..103 | 61..198 | 367 | 58 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15132-PA | 265 | GG15132-PA | 95..265 | 28..198 | 915 | 98.2 | Plus |
Dere\GG20925-PA | 193 | GG20925-PA | 6..191 | 5..198 | 434 | 46.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15953-PA | 245 | GH15953-PA | 76..245 | 28..198 | 881 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PHGPx-PC | 198 | CG12013-PC | 1..198 | 1..198 | 1032 | 100 | Plus |
PHGPx-PD | 238 | CG12013-PD | 68..238 | 28..198 | 897 | 100 | Plus |
PHGPx-PA | 169 | CG12013-PA | 1..169 | 30..198 | 887 | 100 | Plus |
CG15116-PA | 193 | CG15116-PA | 33..191 | 35..198 | 403 | 50.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16605-PA | 213 | GI16605-PA | 1..213 | 1..198 | 928 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16141-PA | 238 | GL16141-PA | 52..238 | 13..198 | 870 | 85 | Plus |
Dper\GL10571-PA | 201 | GL10571-PA | 37..196 | 39..198 | 460 | 53.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11336-PA | 238 | GA11336-PA | 52..238 | 13..198 | 870 | 85 | Plus |
Dpse\GA13504-PA | 201 | GA13504-PA | 37..196 | 39..198 | 462 | 53.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14565-PA | 253 | GM14565-PA | 1..253 | 1..198 | 925 | 73.1 | Plus |
Dsec\GM19853-PA | 193 | GM19853-PA | 33..191 | 35..198 | 422 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13757-PA | 196 | GD13757-PA | 1..190 | 1..135 | 588 | 64.2 | Plus |
Dsim\GD25340-PA | 193 | GD25340-PA | 33..191 | 35..198 | 424 | 50.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12858-PA | 244 | GJ12858-PA | 60..244 | 13..198 | 872 | 88.2 | Plus |
Translation from 99 to 695
> SD18370.hyp MAGRSIVHFFLGSVAIALGSYIYFTMQIDMSANGDYKNAASIYEFTVKDT HGNDVSLEKYKGKVVLVVNIASKCGLTKNNYEKLTDLKEKYGERGLVILN FPCNQFGSQMPEADGEAMVCHLRDSKADIGEVFAKVDVNGDNAAPLYKYL KAKQTGTLGSGIKWNFTKFLVNKEGVPINRYAPTTDPMDIAKDIEKLL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PHGPx-PC | 198 | CG12013-PC | 1..198 | 1..198 | 1032 | 100 | Plus |
PHGPx-PD | 238 | CG12013-PD | 68..238 | 28..198 | 897 | 100 | Plus |
PHGPx-PA | 169 | CG12013-PA | 1..169 | 30..198 | 887 | 100 | Plus |
CG15116-PA | 193 | CG15116-PA | 33..191 | 35..198 | 403 | 50.6 | Plus |