Clone SD18573 Report

Search the DGRC for SD18573

Clone and Library Details

Library:SD
Tissue Source:Drosophila melanogaster Schneider L2 cell culture
Created by:Ling Hong
Date Registered:1999-02-25
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:185
Well:73
Vector:pOT2
Associated Gene/TranscriptCG7029-RB
Protein status:SD18573.pep: wuzgold
Sequenced Size:7203

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7029 2008-04-29 Release 5.5 accounting
CG7029 2008-08-15 Release 5.9 accounting
CG7023 2008-08-15 Release 5.9 accounting
CG7029 2008-12-18 5.12 accounting
CG7023 2008-12-18 5.12 accounting

Clone Sequence Records

SD18573.complete Sequence

7203 bp (7203 high quality bases) assembled on 2005-08-09

GenBank Submission: BT023818

> SD18573.complete
CTGGCCGATCCAACCATTATAAGAAAACCAACAAGAAACGTCGAAAGTTT
TCTCCGTGTTAAAGCCAGCCAATAGCCAAATTACAAACGAAAACGACGAT
TTGCAATTTGCAAATTATGCGTGCGGCACCTAGTGCAATCGAAACCACGT
AAACCCAACGAACGCGAGTGTTTTAGACCACCTGCAACCTGAAACAACCA
CCATTGTACATAATTTACACGAACAATTTTGCAACGACAACAACAAAGGA
CGCCGCGCTGAAAGAGAGAAGTTGACATAACTGCAAAAAGTAAATTGTAT
TTAACAGTGGTGGGCAACTAAATAAAGCCCGGATTGTAATATTGGCAACG
AAAAATCGTAGTGGGAGTGGCCCAATTGCGAAAACGATGTTGTTTTGTTG
AGACAATTGCCAAAAAGCCACCAAAAGTTCAACTAAAAAAGATTGAAATT
TTCCTCAAGCTAGATTTCTAAATACATTTTAACCACGGAAAATTGACTAG
AAATTGCCAGCTAGCAATCATCACCAGACAACGGCCATCAAGGAAACTTC
ACACACGGCACCAAAATTCGACGTGGCATGACAGAATTCTCAACAAACAA
CGATCACAGCAAACCGCATTTCACCGCATCTCAGCAGAAGCCGCATCAGA
ACTCACCCATCCATCAGCAAGCATTCACTCCATCCAATCCCAACACTCAC
CCACATCTGCTTCAACGCTTGGCCCAACAGCAACAGCAGCAGCAGCAACA
GCAGCATCAGCGTCCCCATAAGTTTCAGCAGAGTTTGCCATTTAGCCAGC
TAAACAACGGCAACAACACGGCTGCCCACATTCTGCCCGGATCATCGCCA
CATTCCCCGCTCAGCTACCGCAATCCGCTGAACAGTCCCAGCAATTCGCC
ATTTAGCAATACGGCACAGACGACGATTGGGAAGCGGTACCAGCAGCAGC
AACTGACCGATCGCCTGTTGCAGCAGCAACATCTGCAGCAGTGCCAGCAA
CAGCAACTGCAATCGCTGGGCAGCAGCGATGTGGAGGAGGATCTGGCTGC
GGAGGAACTGAGCGAGGAGAGTCTCAAGCAGAATGTGGCCATTGTGCTGA
GCAATTTGGATCGGTATAACAACGCGTTGCGCAGCATTATCCTGAATGAG
CAGGTGAGCAGCAGCATCATCACGCCCAGCGACAGCCTCCTGTTTGGCGA
GGACTCGAGCGGTTTGCTCTACTGCGACAACGACAACTCAAGGAAGCATA
AGGGCAACAATAACTTTGTTCTGGGCAAGATGGCAGCCACGCCCGAGTCG
GACTACAATAGCAATGCAACCACGCCGGGAGGTCGCAGCAGCGAACAGCA
GTTGCAGCAGCAGCAGCAACAGCAGCAACTTGGGGTAGGTGGGATGCTTT
GTGGTGGTGGTGGCGGTGGCGGTGTTGGGATGCGGGAAACTACTAATGGC
GGTGGCAACAATCTCAACTGCTCGTTGGCCTCGTCGCACGACTTTACTCA
CGACAATTCCGATTACCAGTGGTTCCTGGACTACGGCTATCGAGATGGCT
GCGGCGGAATGCAGCGCAGCGTTTTGAGTTCCCTCTCTGCATCGTACAAT
GCGATGGGGGATCTGATCTACTATGAGGATCTGGCCAAGAATCTGGACGC
CAATCTGGCCGAGGTGGACATGGAGAGCTTTCGGGCGGAGGACATACATT
CCCTGCTCTCGCATCTGCCTGCCTATTGCAAGAGCTTGGGCGGTACAAAC
AGTCGCCTTCAGCAATCTTTGCTGCTTCAGCAGCAGCAACAACAACAGCA
GCAGCTACAACAGCAACAGGTGCTGCAGCACAACAGTATGTTGCAGCACA
ACATGTCCCAGACGTCGACTACCTCCACAAACGAACTGATCGATAACTCC
TTCTGCAAGTCGGAGTTGCTCTTTTCGCCGGTGAGGGAGTCGCACATCTC
GGTGGATTCACTGGATATGGACGCCTATCCGGATGACGGCGAGATTATAC
TCACCTGCAACAAGGACAACTACACGATCGCCTTTGAGGGCAGTGTTCTC
TACTCGGATGATAGTTTCTATGCGGATCCCAGTGACATTGCCGCCAGGAA
CAAACAGAACTGCATCAACTTGCACAGCAATCTGGAGGACATAGTGAAAC
GCAATAAAGCCCTGGAGGTGTCCATGTCGCGTTCGGCGCAGGCTTTCCAG
CCCCTCTGTCCCATGTCGCCCAAGGGACAGGCAGCCACAACATCGGCGGC
CAAGTTACAGCGGTAGGTTCCAAAGGATAAACACATGATTCCATGCACCA
GATATCCTGAGGATTGGTTGTTGCCCGGGTACTTTGCTAGACTTAAAGTC
ACTAAGTAAACATTACGCCATATGTTCTCAGAGACAGCGTTATATTGATC
AAGATAAACAAATATGAACTAAATATGAGATAACTAGTTGTCCAGCTTCT
GAATGCCAACCGCCATCATCAAGACCGGCGGATGTTATACATTTTCCCCT
TCCTTGCAGGCTGCTCTCATTGCAATCGTCTGGGGTCATTTCAATTGAAT
TCAATTTAGTTCCATTTGCCTGCCGGCTGGAATATTAACGTATGGAACGA
ACGCTTCGTTCGGGGGGTAATTTCATATGCGTACTGGGTCTTTTTGGCGT
ATATTCCGCGCCGGCATATGCTAACCTTCAAGGGTTTTTGGTTTTGGGTC
GCGAAACGTGATCAGGCAAGTTAATCCCTGAAGATGGGCAATTACGGGCT
TAGCCCGCATAACTCATTCACAAAACGATTAGCCAGGATAACAGAAAACC
AGAAAATATTATGCAAATAAACCTAAAATAGACGCCAGCAGGTAAAGAAG
TCATAAACCGTGGCAGCAACCAATCCGAAAACCTCACACCGCTTCCTACC
TAAAAACCCAGAAAAAAGAAAACCTTCCGCCAACAAAATTGTAATCCCAA
ACCCTCGACGTGTCTGTTGTGGTAAAGACGCTCGTTATTCCTTGTTTCGC
CCGCTCGCAGGTATCCCTCGGGGAATAATAACACGGAGACCATCACCATA
ACCAGACACCTACCACAGTGCACCGTGCGGAAGAGCAGCAGTCTGCCCAA
TCTGCAGAACGAGGAAGCCATGGCGGGTAGTTGCCACAAAGAGCAGGGAC
CGGAGGAGAGTGGGCCACAGGCGGTTCCACTGAATGTCTCCCAGGCGATC
AGCACCTCCACCATGGAGGCAGGCAAGTCGAGGTCCAGGAATCTGCTGCC
CATGTGCCAGATGCCTATATCCATTAGTGTGTCGATTTCGGAGCGACTGC
AGCAACAGGCGGATCAGCAGCTGCCCAGCGAACAGATCACACCCACATCA
CAGCAACCGCAACAGCAGCATCACCACTCGCATCACCATCGCCACAAGCA
TCGCTGCAGTTGCTCGCAGGAGAGCCACATTTCCGGCTCGGCCTCCTCGG
GCAACTCCTCCAATCCGCCAGCCTTCAATCTAGTCAAGCTGTTCATTAAG
CAGAAGAGCAGCAACAGCAGTGGCGGCCAGGAGGATTTGGGAGCCCAGGC
AAGTGCGCACACCTGTATGGATGTCTCTTCCGGCTGCTGGCCGTCCAGCG
ATGCGGCCAGCTCCAGTAGTGGCTCCTTGGAGCAGCGACTTCGCAAGAAG
AGTATGAACGACTCGGGCAAGGGATCGGCAGTTAGTCGGCATGACGAGGA
GGAGCACTACCCAGATACGGAGACACCCAGACGTCAGCTGAGGGCCCGAT
CGGAGGCAGTGTTCTACGATGATGTCGCCAGCTCCAGTTCCACGGGATCG
TTGACTGCGACCAATTCACCAGCACATCGTCGTCGCAGTATGCCACTAAG
GAATCCACAACTGTACCAACTGGCTGCTCAGGTATCCACTGGCAGTCAAA
TGTCCTCGGAGGCCAGCTCGGAACAGCTAACCCAGGTGCCCCGGCGGGCA
GAAGCTGGTTGCGGAACCAGTACGCGTCCGTTGTCGTGTGCCTCCAGCTC
CGAAATGATCACGCGCTCCATGCAGACCTCCTGCGGATCACTGAGCACCA
CCAGGAGCAGTCTGAGCGATCGCTATCGCTGTGTGCCGCCATCGTTCCTC
GAGAAACTCAATAACTTGGGTGAGGAGCGACAGGCGCCCATTTACGTAAT
CTATCCAAACTATGCCCTGCCCGATTTGGGATTCGTTAAGACTAATGCCA
GCACAGACGTGATCTTCTCACCCTTCAACTACAAGATGACAATGGATGGA
GCGACTGGTAGTACCAGCAGCTCGGGATCTCTAAGGAAGCAGCGCAACAG
CAGCCAGAGCGTGAGCGAAGATGAAATCCTCAAGACGCTGGACTACAAGC
ACGTTGCCGACTGGCAGTCGCTGGCCACCTTGCTGCCGTCGGAATACCGA
AGGCGGCTGCAGCACATTCCGGAGGTGAAGCACCTGGTGCGGCAACTGGA
TGCGGAGCTATCACAACGTCCCCTTTTCTGTATGTCGCCGCCGCTCCGGC
GAAATCGCACGCACATCTGCGACTGTGCCAAGTACTTCCAGGGCCAGCAG
ACCCAAACGGACGAGGCATCCAGCTCGGGATCCAGTCAACAGCCCAGCTC
CGGTTATCGTGGCTCATCAACGCTGCTCACCGACTCCGAGCTGGACGTGG
ATCCGCTGAAGCAGATGTATGTGTACCAGTACGATCAGCAGCGCATGGAC
TCGGGCGTGGAAACCAGTCCCGGTAGTCAGTTAACTCAAACCCCGCCGCA
ACCCATGCCCCGAAGCATTCTGCGCAAGGCACACTCCGCACAGTCGCGCT
CCAAGCGCAATTCCATGATCGAGGCACAGCAGACGCAGAAGCTAACCAAG
CTGGAGAAGCGGCGCAGTTTGCAGGAACCACCGAACAACTACGGTTTGGG
CTCCACCGACGAACTTGCCGATGTCTTCGAGGAGGAGGAGCACAGTCAGC
CGGCGCCGCCGGTGAAACAGAGGCTTTCCCGCAAGGATCTGGATGCCAGG
GCACGGGCTGAAAGCTTCCTGGCCTCCTTGCCGCGTTCTGAGCTCAAGTA
TTACGCCGAGATCGCGTCGATTCTAGAGTCTTCCGGCGAGCATGTGACTT
ACGATGCTGCTGCCCTGAAAAAGGAGGTGAGCCGAGTGCTTAGCCAGCAG
AAGAAAGTGTCATTCAATGATGAGGGTGTGGCTGCCGGATTGCAGCAACA
CGCCAAACGTTTCGCCACACCTCCCAACTCGCCCAACATCTCCATGGGAG
CACTGAAACGCGATACAGTGGATGTGCTGGAGCAGCGCAAGATCGAAAGC
AATCGCTTTAAGCGCCTGCAAATCCAGTGGGAGCTCATGAGCAAGGACTC
GAGTATGCTCAAGGAGCTGGCCAGCGAGGCGGCCACCAAGAGCGGCGGCT
CCACGCCCACCTCGGGCAATTCGACTGGCTCCAACTCAGCGCCAAGGTCT
AGGATTCCTAGGCCTGTTAGCTACCCAGCGGGCAGAAGTTCCACGCCCAC
TTCGTCACGTACTGCCCCCGTTTTGGCCACGCCCTCACCGGCTAGGCCGG
CCACTCCCAAGACTGTCACTAAAAGCCACAACAAACCCGGTCTCTTTACC
TCCCCCCGCCCTAGCAGACTGACCAGCGCCCAGGAAGCAGCCGGCGGTAA
CAAGGTCAGCACTCGATCGCCCAGCAGGATTGTGCAGCCAAAGCGTTATA
GTCTTGCCGGTGCGACCACGCCCACATCCACAACACCCACATCGGCCAGG
GCACGCACGCCCACAAATCGAGTGGCGGTTACGGCGCCAAACACGCCCAA
ACGACAGGCGGTTGCCCAGTCGCCCCGACCCACCTCGCGAGTGCGTTGAG
CGTCCACACGAGTCCAAGCGTCCAAGTCATCCCAATTAGTCAACGGCAGA
CAACAGACACCACACCCAAAACAAAACAAAAAATCCATTAAGGAAAACAC
AGCAGAAAGCAAACAAAACATATTCAACAACAAGAAACAATGCAACATTG
TAAAATTCTAGACTAAGGCTTTGTGTGCGGCTCGATTGCTTAGTTACTAT
TGGCCCGGAAAGTGATATTTAGATGGGAGATGATTCGATCAGGGATCACG
GAGCGAGAACTGATAGCGAGATGTGCTGGTATCTTTGATTGATTTAGTTG
TCCTTATTTGCGGCAGAGCAGCGACCGACTGCGAGAGGAAGTAGCTAAAT
TTTCTTTTTTTACAAAGTATACATAATGAAATCTATACATATGCCAAGTA
CGCGTAAATTAAACAAATATTTTGATGTATATACACACACAAACGATATA
TATATATATAGATATAGATATATATGCGCGTAGACTCGCTTTTCCACTAC
CTATTCGAAATGAAATGACAAAGATGACTTTGCTACCCACTGGAAACATG
ATAAAGTGTATAAAATATTTTCTATACCCAATGCAAAATGGCATATATAC
TGTCAATACTCGAGCAGCAAACAATGCAAAAGTTACCAAGCTGGGCAGGA
AAACGAGATGAATTTGGATACCCATAAACAATAATTGAAAAGCTCAAGAG
CGGATCCAATCGATATTACGCCCCGGGTGCTTTAGAATAAATCCTTTTTT
GTTGCTTTTTTCATGCTCACGCTGATCCTCTTCCCGAATGGAAAACAAGT
GGAGAAAATCAAGGAAAGAAATTTGTAAATTTCCAAATGGCCTTTAAATT
CATTACTGAATGCTTTGCAGTTTTTAATTTGGTTTTTTTAATCGCAAGAT
CTGGGTTTGTTTGCATTTTATGCGGCAACTTTCATTTCGTTTGTAACGAG
CTTATGCTGTTGAGCGCAGGCTCAAAAAGTGATTTCAATTGTACGATATA
TGTTTCCAGCTATACCTACTATATTAATCTTACTATTTTATTTCTATCTA
TTTAATAATATCCATCTGTCAATGACATAACGTTAATTGGTTATTTAACT
GCTGGAAGACATCATTTAGTTTGTACGCCTTAAGTCAAACACTTTTCTAT
CTTAAATTGTATAGCTACTCTTATTGTATTATGTACAAGCGGACGAAACA
CATATTATAGATTTGCGGGAGAATTTATCACCAAATGGATATGCGGGAGT
ATATTATGTATTAAAACGAAAGTGAAAAATAAAAATACAAAATCAATAAA
AATATTAATAAACAAGCAAAAAGTATTATGAAAATAAAAAAAAAAAAAAA
AAA

SD18573.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:01:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG7029-RB 7240 CG7029-RB 2342..6362 2302..6322 19700 99.3 Plus
CG7029-RC 6516 CG7029-RC 2293..5638 2977..6322 16550 99.6 Plus
CG7029-RD 6249 CG7029-RD 2026..5371 2977..6322 16550 99.6 Plus
CG7029-RB 7240 CG7029-RB 35..2334 1..2303 11415 99.7 Plus
CG7029-RC 6516 CG7029-RC 35..2293 1..2262 11210 99.7 Plus
CG7029-RD 6249 CG7029-RD 206..2026 439..2262 9020 99.7 Plus
CG7029-RB 7240 CG7029-RB 6346..7240 6296..7185 4245 98.6 Plus
CG7029-RC 6516 CG7029-RC 5622..6516 6296..7185 4245 98.6 Plus
CG7029-RD 6249 CG7029-RD 5355..6249 6296..7185 4245 98.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:19:06
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 18612085..18615498 2072..5485 16995 99.9 Plus
chr3R 27901430 chr3R 18610509..18612024 557..2072 7580 100 Plus
chr3R 27901430 chr3R 18616155..18617517 5827..7185 6690 99.6 Plus
chr3R 27901430 chr3R 18574403..18574843 1..441 2205 100 Plus
chr3R 27901430 chr3R 18615753..18616097 5483..5827 1725 100 Plus
chr3R 27901430 chr3R 18590101..18590219 440..558 595 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:56:49 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:19:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22788578..22792000 2072..5485 16585 99 Plus
3R 32079331 3R 22787005..22788517 557..2072 7485 99.7 Plus
3R 32079331 3R 22792657..22794034 5827..7189 6455 98.4 Plus
3R 32079331 3R 22750926..22751366 1..441 2205 100 Plus
3R 32079331 3R 22792255..22792599 5483..5827 1725 100 Plus
3R 32079331 3R 22766609..22766727 440..558 580 99.2 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:57:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 22529648..22532831 2302..5485 15560 99.2 Plus
3R 31820162 3R 22527836..22529348 557..2072 7495 99.7 Plus
3R 31820162 3R 22533967..22534865 6296..7189 4265 98.6 Plus
3R 31820162 3R 22533488..22533983 5827..6322 2435 99.3 Plus
3R 31820162 3R 22491757..22492197 1..441 2205 100 Plus
3R 31820162 3R 22533086..22533430 5483..5827 1725 100 Plus
3R 31820162 3R 22529409..22529640 2072..2303 1160 100 Plus
3R 31820162 3R 22507440..22507558 440..558 580 99.1 Plus
Blast to na_te.dros performed 2019-03-16 20:19:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6747..6841 933..1029 201 69.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2351..2466 3290..3402 193 66.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6820 931..1029 184 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2596..2959 699..1031 181 57.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6779..7018 3297..3529 180 59 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2347..2426 933..1012 175 68.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2418 3302..3413 174 67.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6739..6856 3290..3409 170 65.6 Plus
roo 9092 roo DM_ROO 9092bp 1050..1147 930..1029 162 64 Plus
roo 9092 roo DM_ROO 9092bp 1072..1153 931..1012 158 65.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2455..2525 939..1012 156 70.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6768..6859 933..1029 150 65.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6802..6931 3290..3421 150 61.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6799..6876 931..1011 146 68.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6789..6892 933..1029 134 63.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2334..2475 862..1007 133 59.2 Plus
Porto1 4682 Porto1 DOC5 4682bp 3135..3231 6790..6694 133 62.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6846..6938 939..1027 131 63.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6831..6916 942..1029 129 62.5 Plus
roo 9092 roo DM_ROO 9092bp 1072..1149 3299..3376 128 69.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6823 3304..3409 127 63.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2321..2385 3339..3402 124 67.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2771..2883 3339..3455 124 61 Plus

SD18573.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:20:11 Download gff for SD18573.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 18574403..18574843 1..441 100 -> Plus
chr3R 18590103..18590218 442..557 100 -> Plus
chr3R 18610510..18610884 558..932 90 == Plus
chr3R 18610980..18612024 1028..2072 91 -> Plus
chr3R 18612086..18615498 2073..5485 99 -> Plus
chr3R 18615756..18616097 5486..5827 100 -> Plus
chr3R 18616156..18617441 5828..7109 97 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:46:37 Download gff for SD18573.complete
Subject Subject Range Query Range Percent Splice Strand
CG7029-RD 1..1681 578..2261 99 == Plus
CG7029-RD 1682..4554 2977..5849 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:58:24 Download gff for SD18573.complete
Subject Subject Range Query Range Percent Splice Strand
CG7029-RD 1..1681 578..2261 99 == Plus
CG7029-RD 1682..4554 2977..5849 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:00:21 Download gff for SD18573.complete
Subject Subject Range Query Range Percent Splice Strand
CG7029-RA 1477..2362 1372..2261 99 == Plus
CG7029-RA 2363..5235 2977..5849 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:57:39 Download gff for SD18573.complete
Subject Subject Range Query Range Percent Splice Strand
CG7029-RD 1..1681 578..2261 99 == Plus
CG7029-RD 1682..4554 2977..5849 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:58:13 Download gff for SD18573.complete
Subject Subject Range Query Range Percent Splice Strand
CG7029-RA 1477..2362 1372..2261 99 == Plus
CG7029-RA 2363..5235 2977..5849 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:46:36 Download gff for SD18573.complete
Subject Subject Range Query Range Percent Splice Strand
CG7029-RB 35..7240 1..7185 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:58:23 Download gff for SD18573.complete
Subject Subject Range Query Range Percent Splice Strand
CG7029-RB 35..7240 1..7185 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:00:21 Download gff for SD18573.complete
Subject Subject Range Query Range Percent Splice Strand
CG7029-RB 35..7240 1..7185 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:57:40 Download gff for SD18573.complete
Subject Subject Range Query Range Percent Splice Strand
CG7029-RB 35..7240 1..7185 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:58:13 Download gff for SD18573.complete
Subject Subject Range Query Range Percent Splice Strand
CG7029-RA 2204..3089 1372..2261 99 == Plus
CG7029-RA 3090..7313 2977..7185 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:20:11 Download gff for SD18573.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22750926..22751366 1..441 100 -> Plus
3R 22766611..22766726 442..557 99 -> Plus
3R 22787006..22788517 558..2072 99 -> Plus
3R 22788579..22792000 2073..5485 99 -> Plus
3R 22792258..22792599 5486..5827 100 -> Plus
3R 22792658..22794030 5828..7185 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:20:11 Download gff for SD18573.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22750926..22751366 1..441 100 -> Plus
3R 22766611..22766726 442..557 99 -> Plus
3R 22787006..22788517 558..2072 99 -> Plus
3R 22788579..22792000 2073..5485 99 -> Plus
3R 22792258..22792599 5486..5827 100 -> Plus
3R 22792658..22794030 5828..7185 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:20:11 Download gff for SD18573.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22750926..22751366 1..441 100 -> Plus
3R 22766611..22766726 442..557 99 -> Plus
3R 22787006..22788517 558..2072 99 -> Plus
3R 22788579..22792000 2073..5485 99 -> Plus
3R 22792258..22792599 5486..5827 100 -> Plus
3R 22792658..22794030 5828..7185 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:00:21 Download gff for SD18573.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18576648..18577088 1..441 100 -> Plus
arm_3R 18592333..18592448 442..557 99 -> Plus
arm_3R 18612728..18614239 558..2072 99 -> Plus
arm_3R 18614301..18617722 2073..5485 99 -> Plus
arm_3R 18617980..18618321 5486..5827 100 -> Plus
arm_3R 18618380..18619752 5828..7185 98   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:34:28 Download gff for SD18573.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22491757..22492197 1..441 100 -> Plus
3R 22507442..22507557 442..557 99 -> Plus
3R 22527837..22529348 558..2072 99 -> Plus
3R 22529410..22532831 2073..5485 99 -> Plus
3R 22533089..22533430 5486..5827 100 -> Plus
3R 22533489..22534861 5828..7185 98   Plus

SD18573.pep Sequence

Translation from 3119 to 5848

> SD18573.pep
MAGSCHKEQGPEESGPQAVPLNVSQAISTSTMEAGKSRSRNLLPMCQMPI
SISVSISERLQQQADQQLPSEQITPTSQQPQQQHHHSHHHRHKHRCSCSQ
ESHISGSASSGNSSNPPAFNLVKLFIKQKSSNSSGGQEDLGAQASAHTCM
DVSSGCWPSSDAASSSSGSLEQRLRKKSMNDSGKGSAVSRHDEEEHYPDT
ETPRRQLRARSEAVFYDDVASSSSTGSLTATNSPAHRRRSMPLRNPQLYQ
LAAQVSTGSQMSSEASSEQLTQVPRRAEAGCGTSTRPLSCASSSEMITRS
MQTSCGSLSTTRSSLSDRYRCVPPSFLEKLNNLGEERQAPIYVIYPNYAL
PDLGFVKTNASTDVIFSPFNYKMTMDGATGSTSSSGSLRKQRNSSQSVSE
DEILKTLDYKHVADWQSLATLLPSEYRRRLQHIPEVKHLVRQLDAELSQR
PLFCMSPPLRRNRTHICDCAKYFQGQQTQTDEASSSGSSQQPSSGYRGSS
TLLTDSELDVDPLKQMYVYQYDQQRMDSGVETSPGSQLTQTPPQPMPRSI
LRKAHSAQSRSKRNSMIEAQQTQKLTKLEKRRSLQEPPNNYGLGSTDELA
DVFEEEEHSQPAPPVKQRLSRKDLDARARAESFLASLPRSELKYYAEIAS
ILESSGEHVTYDAAALKKEVSRVLSQQKKVSFNDEGVAAGLQQHAKRFAT
PPNSPNISMGALKRDTVDVLEQRKIESNRFKRLQIQWELMSKDSSMLKEL
ASEAATKSGGSTPTSGNSTGSNSAPRSRIPRPVSYPAGRSSTPTSSRTAP
VLATPSPARPATPKTVTKSHNKPGLFTSPRPSRLTSAQEAAGGNKVSTRS
PSRIVQPKRYSLAGATTPTSTTPTSARARTPTNRVAVTAPNTPKRQAVAQ
SPRPTSRVR*

SD18573.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:29:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16712-PA 1709 GF16712-PA 799..1709 1..909 3704 86.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:29:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11167-PA 1733 GG11167-PA 822..1733 1..909 4687 97.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:29:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22316-PA 1646 GH22316-PA 849..1646 118..909 2341 65.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:53:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG7029-PI 1506 CG7029-PI 598..1506 1..909 4637 100 Plus
CG7029-PD 1517 CG7029-PD 609..1517 1..909 4637 100 Plus
CG7029-PC 1517 CG7029-PC 609..1517 1..909 4637 100 Plus
CG7029-PA 1744 CG7029-PA 836..1744 1..909 4637 100 Plus
CG7029-PG 1471 CG7029-PG 564..1471 1..909 4620 99.9 Plus
CG7029-PF 1694 CG7029-PF 830..1694 1..909 4354 95.2 Plus
Muc68D-PB 1514 CG6004-PB 296..1113 24..881 206 18.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:29:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21993-PA 1752 GI21993-PA 816..1752 20..909 2435 64.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:29:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23767-PA 1762 GL23767-PA 861..1762 17..909 3121 79.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:29:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26733-PA 1771 GA26733-PA 869..1771 17..909 3123 78 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:29:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26468-PA 1741 GM26468-PA 830..1741 1..909 4749 98.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:29:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20984-PA 1496 GD20984-PA 585..1496 1..909 4777 99.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:29:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14348-PA 1695 GJ14348-PA 807..1695 12..909 2774 68 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:29:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11475-PA 1769 GK11475-PA 840..1769 17..909 3166 76.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:29:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10333-PA 1740 GE10333-PA 828..1740 1..909 4639 96.5 Plus

SD18573.hyp Sequence

Translation from 3119 to 5848

> SD18573.hyp
MAGSCHKEQGPEESGPQAVPLNVSQAISTSTMEAGKSRSRNLLPMCQMPI
SISVSISERLQQQADQQLPSEQITPTSQQPQQQHHHSHHHRHKHRCSCSQ
ESHISGSASSGNSSNPPAFNLVKLFIKQKSSNSSGGQEDLGAQASAHTCM
DVSSGCWPSSDAASSSSGSLEQRLRKKSMNDSGKGSAVSRHDEEEHYPDT
ETPRRQLRARSEAVFYDDVASSSSTGSLTATNSPAHRRRSMPLRNPQLYQ
LAAQVSTGSQMSSEASSEQLTQVPRRAEAGCGTSTRPLSCASSSEMITRS
MQTSCGSLSTTRSSLSDRYRCVPPSFLEKLNNLGEERQAPIYVIYPNYAL
PDLGFVKTNASTDVIFSPFNYKMTMDGATGSTSSSGSLRKQRNSSQSVSE
DEILKTLDYKHVADWQSLATLLPSEYRRRLQHIPEVKHLVRQLDAELSQR
PLFCMSPPLRRNRTHICDCAKYFQGQQTQTDEASSSGSSQQPSSGYRGSS
TLLTDSELDVDPLKQMYVYQYDQQRMDSGVETSPGSQLTQTPPQPMPRSI
LRKAHSAQSRSKRNSMIEAQQTQKLTKLEKRRSLQEPPNNYGLGSTDELA
DVFEEEEHSQPAPPVKQRLSRKDLDARARAESFLASLPRSELKYYAEIAS
ILESSGEHVTYDAAALKKEVSRVLSQQKKVSFNDEGVAAGLQQHAKRFAT
PPNSPNISMGALKRDTVDVLEQRKIESNRFKRLQIQWELMSKDSSMLKEL
ASEAATKSGGSTPTSGNSTGSNSAPRSRIPRPVSYPAGRSSTPTSSRTAP
VLATPSPARPATPKTVTKSHNKPGLFTSPRPSRLTSAQEAAGGNKVSTRS
PSRIVQPKRYSLAGATTPTSTTPTSARARTPTNRVAVTAPNTPKRQAVAQ
SPRPTSRVR*

SD18573.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:09:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG7029-PI 1506 CG7029-PI 598..1506 1..909 4637 100 Plus
CG7029-PD 1517 CG7029-PD 609..1517 1..909 4637 100 Plus
CG7029-PC 1517 CG7029-PC 609..1517 1..909 4637 100 Plus
CG7029-PA 1744 CG7029-PA 836..1744 1..909 4637 100 Plus
CG7029-PG 1471 CG7029-PG 564..1471 1..909 4620 99.9 Plus