BDGP Sequence Production Resources |
Search the DGRC for SD19278
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 192 |
Well: | 78 |
Vector: | pOT2 |
Associated Gene/Transcript | CG40042-RA |
Protein status: | SD19278.pep: gold |
Sequenced Size: | 938 |
Gene | Date | Evidence |
---|---|---|
CG18856 | 2002-01-01 | Sim4 clustering to Release 2 |
CG40042 | 2002-05-18 | Blastp of sequenced clone |
CG40042 | 2003-01-01 | Sim4 clustering to Release 3 |
CG40042 | 2008-04-29 | Release 5.5 accounting |
CG40042 | 2008-08-15 | Release 5.9 accounting |
CG40042 | 2008-12-18 | 5.12 accounting |
938 bp (938 high quality bases) assembled on 2002-05-18
GenBank Submission: AY119236
> SD19278.complete ATTTTTAATTGTTCTGCAGTCATGCTGTCTCTAGTTTAATTTCCTGAATC TAATGTGAAGAAACAGGAATGCTTGAACACAGATGTCACTTCTACAGGGG AAAAAAGTTTAAAAACAAGTAAATCACAGAAAACGTCGTTTCCTTTTGCT AATAGAGCGCCTGAATTCGGTGGAAATAGCAAAAATAATATATCACCATT CTTGGGACTGCAAACAAATTCGAAAATGAGTGACAATTTTTCAAGAACAC CATATTCTGATGGGCACGCTGCAACCCATGAGGAAGCATCAAAACCCCAC TACACTACCACTACGAGTTCTTTTAGTAGAACTCCGGTCTCGCCGTACCT CAACTATGATTCGCGATATCTGCAGCAAGCACAGCCAGAGTTCATTTTTC CCGAAGGGGCCAACAAGCAGCGTGGACGCTTCGAGTTGGCCTTCTCTCAG ATAGGCACTTCGGTAATGATTGGCGGTGGAATTGGCGGCCTAGCAGGTGT TTATAATGGTTTAAAAGTCACAAAAGCACTCGAGCAGAAGGGAAAAGTTC GTCGAACACAGTTACTTAATCACATTATGAAGCAAGGTTCCGGCACAGCT AACACATTAGGTACATTGACGGTGCTGTATTCGGCTTGTGGAGTTTTGCT GCAGTTTTTCCGCGGAGAAGATGATCATATAAACACAGTAATTGCGGGCT CTGCCACAGGACTATTATACAAGTCAACAGCTGGCCTTAGGACGTGTGCT TTTGGTGGAGCTATTGGGCTGGGCATCTCGTCCCTCTATTGCTTATACCT AATAGCACAGGAAAACAGTTCGAACTCAAGTCCCAAATACCTATAGATGG CTGAAATATGTAGTACGCAGGCATTAATAGGATCACTCCTAGCCGATTAA AATTATAAATACGAAGTTTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG40042-RA | 1058 | CG40042-RA | 1..922 | 1..922 | 4610 | 100 | Plus |
CG40042.a | 938 | CG40042.a | 1..730 | 1..730 | 3650 | 100 | Plus |
CG40042-RD | 970 | CG40042-RD | 328..970 | 278..920 | 3215 | 100 | Plus |
CG40042-RD | 970 | CG40042-RD | 1..279 | 1..279 | 1395 | 100 | Plus |
CG40042.a | 938 | CG40042.a | 745..938 | 727..920 | 970 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2LHet | 368865 | chr2LHet | 168492..168776 | 562..278 | 1425 | 100 | Minus |
chr2LHet | 368865 | chr2LHet | 168875..169151 | 277..1 | 1355 | 99.3 | Minus |
chr2LHet | 368865 | chr2LHet | 168011..168204 | 920..727 | 970 | 100 | Minus |
chr2LHet | 368865 | chr2LHet | 168265..168434 | 730..561 | 850 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 23312946..23313230 | 562..278 | 1425 | 100 | Minus |
2L | 23513712 | 2L | 23313329..23313605 | 277..1 | 1385 | 100 | Minus |
2L | 23513712 | 2L | 23312463..23312658 | 922..727 | 980 | 100 | Minus |
2L | 23513712 | 2L | 23312719..23312888 | 730..561 | 850 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 23312946..23313230 | 562..278 | 1425 | 100 | Minus |
2L | 23513712 | 2L | 23313329..23313605 | 277..1 | 1385 | 100 | Minus |
2L | 23513712 | 2L | 23312463..23312658 | 922..727 | 980 | 100 | Minus |
2L | 23513712 | 2L | 23312719..23312888 | 730..561 | 850 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2LHet | 168011..168200 | 731..920 | 100 | <- | Minus |
chr2LHet | 168265..168434 | 561..730 | 100 | <- | Minus |
chr2LHet | 168494..168776 | 278..560 | 100 | <- | Minus |
chr2LHet | 168875..169151 | 1..277 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40042-RA | 1..621 | 226..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40042-RA | 1..621 | 226..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40042-RA | 1..621 | 226..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40042-RA | 1..621 | 226..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40042-RA | 1..621 | 226..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40042-RA | 1..920 | 1..920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40042-RA | 1..920 | 1..920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40042-RA | 1..893 | 28..920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40042-RA | 1..920 | 1..920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40042-RA | 1..893 | 28..920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 23312465..23312654 | 731..920 | 100 | <- | Minus |
2L | 23312719..23312888 | 561..730 | 100 | <- | Minus |
2L | 23312948..23313230 | 278..560 | 100 | <- | Minus |
2L | 23313329..23313605 | 1..277 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 23312465..23312654 | 731..920 | 100 | <- | Minus |
2L | 23312719..23312888 | 561..730 | 100 | <- | Minus |
2L | 23312948..23313230 | 278..560 | 100 | <- | Minus |
2L | 23313329..23313605 | 1..277 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 23312465..23312654 | 731..920 | 100 | <- | Minus |
2L | 23312719..23312888 | 561..730 | 100 | <- | Minus |
2L | 23312948..23313230 | 278..560 | 100 | <- | Minus |
2L | 23313329..23313605 | 1..277 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2LHet | 167980..168169 | 731..920 | 100 | <- | Minus |
2LHet | 168234..168403 | 561..730 | 100 | <- | Minus |
2LHet | 168463..168745 | 278..560 | 100 | <- | Minus |
2LHet | 168844..169120 | 1..277 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 23312948..23313230 | 278..560 | 100 | <- | Minus |
2L | 23313329..23313605 | 1..277 | 100 | Minus | |
2L | 23312465..23312654 | 731..920 | 100 | <- | Minus |
2L | 23312719..23312888 | 561..730 | 100 | <- | Minus |
Translation from 225 to 845
> SD19278.pep MSDNFSRTPYSDGHAATHEEASKPHYTTTTSSFSRTPVSPYLNYDSRYLQ QAQPEFIFPEGANKQRGRFELAFSQIGTSVMIGGGIGGLAGVYNGLKVTK ALEQKGKVRRTQLLNHIMKQGSGTANTLGTLTVLYSACGVLLQFFRGEDD HINTVIAGSATGLLYKSTAGLRTCAFGGAIGLGISSLYCLYLIAQENSSN SSPKYL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16030-PA | 206 | GF16030-PA | 1..206 | 1..206 | 859 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21415-PA | 206 | GG21415-PA | 1..206 | 1..206 | 925 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13630-PA | 209 | GH13630-PA | 1..209 | 1..206 | 791 | 76.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tim23-PA | 206 | CG40042-PA | 1..206 | 1..206 | 1064 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11791-PA | 209 | GI11791-PA | 1..209 | 1..206 | 775 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA29086-PA | 206 | GA29086-PA | 1..206 | 1..206 | 835 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11757-PA | 206 | GM11757-PA | 1..206 | 1..206 | 1009 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17741-PA | 206 | GD17741-PA | 1..206 | 1..206 | 1009 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13156-PA | 210 | GJ13156-PA | 1..210 | 1..206 | 805 | 77.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15333-PA | 206 | GK15333-PA | 1..206 | 1..206 | 820 | 79.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11375-PA | 206 | GE11375-PA | 1..206 | 1..206 | 925 | 90.3 | Plus |
Translation from 225 to 845
> SD19278.hyp MSDNFSRTPYSDGHAATHEEASKPHYTTTTSSFSRTPVSPYLNYDSRYLQ QAQPEFIFPEGANKQRGRFELAFSQIGTSVMIGGGIGGLAGVYNGLKVTK ALEQKGKVRRTQLLNHIMKQGSGTANTLGTLTVLYSACGVLLQFFRGEDD HINTVIAGSATGLLYKSTAGLRTCAFGGAIGLGISSLYCLYLIAQENSSN SSPKYL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG40042-PA | 206 | CG40042-PA | 1..206 | 1..206 | 1064 | 100 | Plus |