BDGP Sequence Production Resources |
Search the DGRC for SD19435
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 194 |
Well: | 35 |
Vector: | pOT2 |
Associated Gene/Transcript | Pngl-RA |
Protein status: | SD19435.pep: gold |
Preliminary Size: | 1842 |
Sequenced Size: | 2275 |
Gene | Date | Evidence |
---|---|---|
CG7865 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7865 | 2002-05-18 | Blastp of sequenced clone |
CG7865 | 2003-01-01 | Sim4 clustering to Release 3 |
PNGase | 2008-04-29 | Release 5.5 accounting |
PNGase | 2008-08-15 | Release 5.9 accounting |
PNGase | 2008-12-18 | 5.12 accounting |
2275 bp (2275 high quality bases) assembled on 2002-05-18
GenBank Submission: AY119239
> SD19435.complete TCACGGTCTCAGATTGCCTCTTACTCATGCCAGCCAAATGCTAGCTTTTT TGGTGGAAAAAATAATAGAATAATACAAAAGGAATTTTCAGTTCTTTTCG TCGCTTTATTATTAAGAAGCGGTTACAAGTATTTTAGTGGTATGACCTAA TAAATATTGGGAGTTCCAAATCAAAACATTCTTCGATCGCTACTAACTAA AAATGTGGCAGCTGGTCATCAACATGGTGGACATAAACTTGGAGTGCGTG CACCAGATCGAACCGAAGACCCGTTCTGCTGGTCAGCAGCAGCAGGAGCG AGGGTTAAAGGAAGCCTACCTGGAAGCGGTCCGCATTCTGTTAGTGCTGC TGGAGAACATCTTGGCGCAGCCGGAGAACTCCATGTTCCGCACCATACGG CAGGAAAACAAAGCTATTAAAGAAAAGCTGCTGTCCTTGCCCGGCTGTGA GAGGTTACTGGAAGCCATAGGCTTCGTACGCGCCCCCAGTTCCAACGCCT ACACCTTGCCCACAGAGGTGTCACTGCAGCAGGTGAAGAAGTACAGAGAT GCGCTGAGCGAGAGACGCACTGCCTGGCTTAACGGCACAGTGTCAAAAAG TCCTCCTCAACAAAGCACCACCAGCACCACGCCCTTGTTCATCAAGCCTT CTGTGGAATATCGCCATAGAATCGCCTTCCCCCGTGTATTGCGCACCAAT AATAACTTTCTGCAGTCGCTAGAGCTTTATTCCGATGCAGTCATGCAGTA CGAGGATAACCTGCTGCTGGCTACTGGCCGCACTCTGATTCCTGTGGAAG AGCTCACCGAAATGGCAAGCGAGAAACTGATAGACATCCAAGATCAAATT GCGTCGGGTGAGCGCCAGGAGAAGGAGCCATGTGTTCGCGACTTGCTGCT TGTGGAGCTGGTAAACTGGTTCAACACGCAGTTCTTCCAGTGGGTAAACA ATATACCTTGCCGCGTGTGTGGGAGTGAAGAGAGCAGGCTGCGCCGCACT GAACGGGAAGGTGATATAAGGGTGGAAGTCACCGTTTGCTGCGGCCAGGA GAGCAAGTTCTACCGCTATAACGACATTTCCCAGCTCCTAGTTTCCCGTA AGGGCCGTTGCGGAGAATATGCCAATTGCTTCACATTCCTCTGTCGCGCC CTCGACTACGACGCCCGTATTGTCCACTCGCATTTTGATCACGTCTGGAC CGAGGTGTACTCCGAGGCCCAGATGCGTTGGCTCCATGTTGACCCCTCCG AGAACGTTATAGATTCTCCGCTGATGTATCAGCATGGCTGGAAACGTCAC ATCGACTACATTCTTGCATACTCTAGGGACGACATCCAAGATGTGACTTG GCGCTATACTAATGACCACCAGAAGATTCTACACCTACGAAAGCTGTGCG GGGAAAAAGAAATGGTGCAAACGCTGGACGCGATTCGAGCAAAGCGGCGG CAAAATTGCACCGCCGATCGAAAGTTATTCCTCAGCCAGCGCAATATGTA CGAGGTCATCGGCTTGACGCTAGAGCGTAAGCCGACAGAAAACGAGCTGA AGGGTCGGAGTTCGGGAAGTCTTTCTTGGCGGCAGTCACGTGGAGAGCAT ACTTTTACCAATATATTCGTTTTCAATCTAAGTGCAACCGAACTACAAAA AAGGCAACTTAATGTGCGTTACAGCTGTGCCACCGATACATACGAACGAT ATGCCAAAGAAGGAGAACACATCACTATTTTGGATAGCTATAAGACATGG CAAAAAGCGCAATTTTCCTCAAAGAACATATTTCGGAAAGTGGAACGCGA TTGGAAAATGGCATATTTGGCTAGACTGGAGGATACCGATTGCGGAGAAA TTGCCTGGACGTTTGATTTCAGCAAGACCAATTTAAAGGTTAAGTCTTAC AACTTAGTTTTCGAGACAAAAACTTTTGGCGACGGAAAAATCAGCGTGAC TGTCGATGCCACCGACGGAAGCGCTTCGGTTGAAAATGCCACTGGATTCA AAATAGTGGCCAAACTTACGGGTGGCAAGGGCGATGTAGCATGGCAACAC ACACAACTGTTCAGGCAGAGTCTTAATTCAAGAGACTATCCCTTCGATCT GCAAGTGCAACTACATTGAAGTCCTCAAAAAATATTTTGGAGAAATTAAA ATGTAATTGTAAATAATATAAACGATTCCCAGTCTGGATGAAAATATAAT AATTAAAAATGTATATTAAAAATTAAATAAAGGCACATAGTGTCGCTATA TGTAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PNGase-RB | 2260 | PNGase-RB | 1..2255 | 1..2255 | 11260 | 99.9 | Plus |
PNGase-RA | 2293 | PNGase-RA | 172..2222 | 205..2255 | 10240 | 99.9 | Plus |
PNGase.a | 2163 | PNGase.a | 594..2158 | 691..2255 | 7810 | 99.9 | Plus |
PNGase.a | 2163 | PNGase.a | 97..584 | 205..692 | 2440 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 1905604..1906440 | 691..1527 | 4185 | 100 | Plus |
chr2R | 21145070 | chr2R | 1906787..1907336 | 1704..2253 | 2720 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 1905001..1905397 | 205..601 | 1970 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 1901006..1901149 | 1..144 | 720 | 100 | Plus |
chr2R | 21145070 | chr2R | 1906640..1906736 | 1613..1709 | 485 | 100 | Plus |
chr2R | 21145070 | chr2R | 1905451..1905542 | 600..691 | 460 | 100 | Plus |
chr2R | 21145070 | chr2R | 1906495..1906580 | 1527..1612 | 430 | 100 | Plus |
chr2R | 21145070 | chr2R | 1904532..1904593 | 144..205 | 310 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 6018417..6019253 | 691..1527 | 4185 | 100 | Plus |
2R | 25286936 | 2R | 6019600..6020151 | 1704..2255 | 2730 | 99.6 | Plus |
2R | 25286936 | 2R | 6017814..6018210 | 205..601 | 1985 | 100 | Plus |
2R | 25286936 | 2R | 6013822..6013965 | 1..144 | 720 | 100 | Plus |
2R | 25286936 | 2R | 6019453..6019549 | 1613..1709 | 485 | 100 | Plus |
2R | 25286936 | 2R | 6018264..6018355 | 600..691 | 460 | 100 | Plus |
2R | 25286936 | 2R | 6019308..6019393 | 1527..1612 | 430 | 100 | Plus |
2R | 25286936 | 2R | 6017345..6017406 | 144..205 | 310 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 6019616..6020452 | 691..1527 | 4185 | 100 | Plus |
2R | 25260384 | 2R | 6020799..6021350 | 1704..2255 | 2730 | 99.6 | Plus |
2R | 25260384 | 2R | 6019013..6019409 | 205..601 | 1985 | 100 | Plus |
2R | 25260384 | 2R | 6015021..6015164 | 1..144 | 720 | 100 | Plus |
2R | 25260384 | 2R | 6020652..6020748 | 1613..1709 | 485 | 100 | Plus |
2R | 25260384 | 2R | 6019463..6019554 | 600..691 | 460 | 100 | Plus |
2R | 25260384 | 2R | 6020507..6020592 | 1527..1612 | 430 | 100 | Plus |
2R | 25260384 | 2R | 6018544..6018605 | 144..205 | 310 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rt1a | 5108 | Rt1a DME278684 5108bp Derived from AJ278684 (AJ278684.1) (Rel. 64, Last updated, Version 1). | 5020..5072 | 445..395 | 125 | 73.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 1904533..1904593 | 145..205 | 100 | -> | Plus |
chr2R | 1901006..1901149 | 1..144 | 100 | -> | Plus |
chr2R | 1905002..1905395 | 206..599 | 99 | -> | Plus |
chr2R | 1905451..1905542 | 600..691 | 100 | -> | Plus |
chr2R | 1905605..1906440 | 692..1527 | 100 | -> | Plus |
chr2R | 1906496..1906580 | 1528..1612 | 100 | -> | Plus |
chr2R | 1906640..1906736 | 1613..1709 | 100 | -> | Plus |
chr2R | 1906793..1907336 | 1710..2253 | 92 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PNGase-RB | 1..1917 | 203..2119 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pngl-RB | 1..1917 | 203..2119 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pngl-RA | 1..1896 | 224..2119 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PNGase-RB | 1..1917 | 203..2119 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pngl-RA | 1..1896 | 224..2119 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PNGase-RB | 1..2253 | 1..2253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pngl-RB | 1..2253 | 1..2253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pngl-RA | 70..2124 | 197..2253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PNGase-RB | 1..2253 | 1..2253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pngl-RA | 70..2124 | 197..2253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6013822..6013965 | 1..144 | 100 | -> | Plus |
2R | 6017346..6017406 | 145..205 | 100 | -> | Plus |
2R | 6017815..6018208 | 206..599 | 100 | -> | Plus |
2R | 6018264..6018355 | 600..691 | 100 | -> | Plus |
2R | 6018418..6019253 | 692..1527 | 100 | -> | Plus |
2R | 6019309..6019393 | 1528..1612 | 100 | -> | Plus |
2R | 6019453..6019549 | 1613..1709 | 100 | -> | Plus |
2R | 6019606..6020149 | 1710..2253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6013822..6013965 | 1..144 | 100 | -> | Plus |
2R | 6017346..6017406 | 145..205 | 100 | -> | Plus |
2R | 6017815..6018208 | 206..599 | 100 | -> | Plus |
2R | 6018264..6018355 | 600..691 | 100 | -> | Plus |
2R | 6018418..6019253 | 692..1527 | 100 | -> | Plus |
2R | 6019309..6019393 | 1528..1612 | 100 | -> | Plus |
2R | 6019453..6019549 | 1613..1709 | 100 | -> | Plus |
2R | 6019606..6020149 | 1710..2253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6013822..6013965 | 1..144 | 100 | -> | Plus |
2R | 6017346..6017406 | 145..205 | 100 | -> | Plus |
2R | 6017815..6018208 | 206..599 | 100 | -> | Plus |
2R | 6018264..6018355 | 600..691 | 100 | -> | Plus |
2R | 6018418..6019253 | 692..1527 | 100 | -> | Plus |
2R | 6019309..6019393 | 1528..1612 | 100 | -> | Plus |
2R | 6019453..6019549 | 1613..1709 | 100 | -> | Plus |
2R | 6019606..6020149 | 1710..2253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 1905320..1905713 | 206..599 | 100 | -> | Plus |
arm_2R | 1905769..1905860 | 600..691 | 100 | -> | Plus |
arm_2R | 1901327..1901470 | 1..144 | 100 | -> | Plus |
arm_2R | 1904851..1904911 | 145..205 | 100 | -> | Plus |
arm_2R | 1905923..1906758 | 692..1527 | 100 | -> | Plus |
arm_2R | 1906814..1906898 | 1528..1612 | 100 | -> | Plus |
arm_2R | 1906958..1907054 | 1613..1709 | 100 | -> | Plus |
arm_2R | 1907111..1907654 | 1710..2253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6019014..6019407 | 206..599 | 100 | -> | Plus |
2R | 6019463..6019554 | 600..691 | 100 | -> | Plus |
2R | 6019617..6020452 | 692..1527 | 100 | -> | Plus |
2R | 6020508..6020592 | 1528..1612 | 100 | -> | Plus |
2R | 6020652..6020748 | 1613..1709 | 100 | -> | Plus |
2R | 6020805..6021348 | 1710..2253 | 99 | Plus | |
2R | 6015021..6015164 | 1..144 | 100 | -> | Plus |
2R | 6018545..6018605 | 145..205 | 100 | -> | Plus |
Translation from 202 to 2118
> SD19435.hyp MWQLVINMVDINLECVHQIEPKTRSAGQQQQERGLKEAYLEAVRILLVLL ENILAQPENSMFRTIRQENKAIKEKLLSLPGCERLLEAIGFVRAPSSNAY TLPTEVSLQQVKKYRDALSERRTAWLNGTVSKSPPQQSTTSTTPLFIKPS VEYRHRIAFPRVLRTNNNFLQSLELYSDAVMQYEDNLLLATGRTLIPVEE LTEMASEKLIDIQDQIASGERQEKEPCVRDLLLVELVNWFNTQFFQWVNN IPCRVCGSEESRLRRTEREGDIRVEVTVCCGQESKFYRYNDISQLLVSRK GRCGEYANCFTFLCRALDYDARIVHSHFDHVWTEVYSEAQMRWLHVDPSE NVIDSPLMYQHGWKRHIDYILAYSRDDIQDVTWRYTNDHQKILHLRKLCG EKEMVQTLDAIRAKRRQNCTADRKLFLSQRNMYEVIGLTLERKPTENELK GRSSGSLSWRQSRGEHTFTNIFVFNLSATELQKRQLNVRYSCATDTYERY AKEGEHITILDSYKTWQKAQFSSKNIFRKVERDWKMAYLARLEDTDCGEI AWTFDFSKTNLKVKSYNLVFETKTFGDGKISVTVDATDGSASVENATGFK IVAKLTGGKGDVAWQHTQLFRQSLNSRDYPFDLQVQLH*
Translation from 202 to 2118
> SD19435.pep MWQLVINMVDINLECVHQIEPKTRSAGQQQQERGLKEAYLEAVRILLVLL ENILAQPENSMFRTIRQENKAIKEKLLSLPGCERLLEAIGFVRAPSSNAY TLPTEVSLQQVKKYRDALSERRTAWLNGTVSKSPPQQSTTSTTPLFIKPS VEYRHRIAFPRVLRTNNNFLQSLELYSDAVMQYEDNLLLATGRTLIPVEE LTEMASEKLIDIQDQIASGERQEKEPCVRDLLLVELVNWFNTQFFQWVNN IPCRVCGSEESRLRRTEREGDIRVEVTVCCGQESKFYRYNDISQLLVSRK GRCGEYANCFTFLCRALDYDARIVHSHFDHVWTEVYSEAQMRWLHVDPSE NVIDSPLMYQHGWKRHIDYILAYSRDDIQDVTWRYTNDHQKILHLRKLCG EKEMVQTLDAIRAKRRQNCTADRKLFLSQRNMYEVIGLTLERKPTENELK GRSSGSLSWRQSRGEHTFTNIFVFNLSATELQKRQLNVRYSCATDTYERY AKEGEHITILDSYKTWQKAQFSSKNIFRKVERDWKMAYLARLEDTDCGEI AWTFDFSKTNLKVKSYNLVFETKTFGDGKISVTVDATDGSASVENATGFK IVAKLTGGKGDVAWQHTQLFRQSLNSRDYPFDLQVQLH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11040-PA | 632 | GF11040-PA | 1..632 | 8..638 | 2689 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23191-PA | 633 | GG23191-PA | 1..633 | 8..638 | 3150 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21476-PA | 620 | GH21476-PA | 1..620 | 8..638 | 2567 | 73.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pngl-PC | 631 | CG7865-PC | 1..631 | 8..638 | 3306 | 100 | Plus |
Pngl-PA | 631 | CG7865-PA | 1..631 | 8..638 | 3306 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19953-PA | 630 | GI19953-PA | 1..630 | 8..638 | 2573 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16697-PA | 632 | GL16697-PA | 1..632 | 8..638 | 2715 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20643-PA | 632 | GA20643-PA | 1..632 | 8..638 | 2723 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16531-PA | 631 | GM16531-PA | 1..631 | 8..638 | 3360 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10391-PA | 631 | GD10391-PA | 1..631 | 8..638 | 3360 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17865-PA | 630 | GJ17865-PA | 1..630 | 8..638 | 2486 | 72 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22046-PA | 639 | GK22046-PA | 1..639 | 8..638 | 2554 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20670-PA | 631 | GE20670-PA | 1..631 | 8..638 | 3100 | 91 | Plus |