BDGP Sequence Production Resources |
Search the DGRC for SD19581
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 195 |
Well: | 81 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5380-RA |
Protein status: | SD19581.pep: gold |
Preliminary Size: | 882 |
Sequenced Size: | 1043 |
Gene | Date | Evidence |
---|---|---|
CG5380 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5380 | 2002-05-18 | Blastp of sequenced clone |
CG5380 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5380 | 2008-04-29 | Release 5.5 accounting |
CG5380 | 2008-08-15 | Release 5.9 accounting |
CG5380 | 2008-12-18 | 5.12 accounting |
1043 bp (1043 high quality bases) assembled on 2002-05-18
GenBank Submission: AY119241
> SD19581.complete CGAAAAATGGCCACTGAGGTGTCGCAACTTTTGCTGGCGGTGGTCCAGGG CATCCCAGCCGGTGCCACCAACGATGACCTGACCAAGGCGCTGCCCGATG TGCCGGCGGCCACGCGGGTGGAAGCTTTGAATATACTGCTGCAGGAGGGC GGGATCGAGATCCTGAAGAAGGGTGAAAAGCTGGTGTACCGTGCCAAGGA CCCGGAAAAGAAGAGTGCCCTGCCCAAGGATGCGGACAATGAGGAGAAGG TCGTCTACGGCATTGTTGAGGAGGGCGGCAACAAAGGCATCTGGATTAGG GATATACGTATGAAGTCCAACCTGAACATGATACAGCTCAACAAGATCCT CAAGAACCTAGAAACCAAGAAGCTCATCAAGGCGGTCAAGTCGGTGAACG CCAGCAAAAAGAAAGTGTACATGCTGTACAACCTAGAGCCGGATCTCTCC ATTACGGGAGGAGCCTGGTACCAGGATCAGGACTTTGAGGTGGAGTTTGT GGATGTGCTCAACCAGCAGTGCCTGCGCTTTCTGCAAATGAAACGCGACA GTGCGGAAAAGAAGCGCGAGGGGCCACTGGCCTTCAAGCAGATGTCTTGC TGCACGGTGAACGAGGTTCAGAAGTTCATCTCGGACCTGGGCATCAGTAA GGTTAATCTAGCGGAGGCCGATCTGGAAACAATTCTCAAAACAGTGGTGT ACGACGGCAATGCGGAACGAGTGCGCCAGCAGGATGGATCCTTCGTCTAC CGGGCGGTGAACGCCCCACTTCCTCCGACTGGTCTGGTCCAGATGCCATG TGGCATTTGTCCCGTCATCAAAAACTGCTCCAATTGTGGCGATGTAACTG CTATAACTTGTGAATATATGCGAGATTGGTTGGATTAGGGATTAGCTCGA AAACTCTGGATTTTATTTTATATTAAGTATTACAAATTGAACTTATTGTT TATTAAGCTTTTTGTAGCACAAACATTATTAACTCTTAAATGTTATGGTT ACCATAAAAAAAAGGAAAATTTGAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5380-RA | 1069 | CG5380-RA | 48..1069 | 2..1023 | 5050 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 1944..2011 | 950..884 | 157 | 72.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 18189618..18190241 | 400..1023 | 99 | <- | Minus |
chr3R | 18190300..18190697 | 1..399 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5380-RA | 1..882 | 7..888 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5380-RA | 1..882 | 7..888 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5380-RA | 1..882 | 7..888 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5380-RA | 1..882 | 7..888 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5380-RA | 1..882 | 7..888 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5380-RA | 1..1022 | 2..1023 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5380-RA | 1..1022 | 2..1023 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5380-RB | 80..1102 | 1..1023 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5380-RA | 1..1022 | 2..1023 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5380-RB | 80..1102 | 1..1023 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22366762..22367159 | 1..399 | 99 | Minus | |
3R | 22366080..22366703 | 400..1023 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22366762..22367159 | 1..399 | 99 | Minus | |
3R | 22366080..22366703 | 400..1023 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22366762..22367159 | 1..399 | 99 | Minus | |
3R | 22366080..22366703 | 400..1023 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 18191802..18192425 | 400..1023 | 99 | <- | Minus |
arm_3R | 18192484..18192881 | 1..399 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22106911..22107534 | 400..1023 | 99 | <- | Minus |
3R | 22107593..22107990 | 1..399 | 99 | Minus |
Translation from 3 to 887
> SD19581.hyp KMATEVSQLLLAVVQGIPAGATNDDLTKALPDVPAATRVEALNILLQEGG IEILKKGEKLVYRAKDPEKKSALPKDADNEEKVVYGIVEEGGNKGIWIRD IRMKSNLNMIQLNKILKNLETKKLIKAVKSVNASKKKVYMLYNLEPDLSI TGGAWYQDQDFEVEFVDVLNQQCLRFLQMKRDSAEKKREGPLAFKQMSCC TVNEVQKFISDLGISKVNLAEADLETILKTVVYDGNAERVRQQDGSFVYR AVNAPLPPTGLVQMPCGICPVIKNCSNCGDVTAITCEYMRDWLD*
Translation from 6 to 887
> SD19581.pep MATEVSQLLLAVVQGIPAGATNDDLTKALPDVPAATRVEALNILLQEGGI EILKKGEKLVYRAKDPEKKSALPKDADNEEKVVYGIVEEGGNKGIWIRDI RMKSNLNMIQLNKILKNLETKKLIKAVKSVNASKKKVYMLYNLEPDLSIT GGAWYQDQDFEVEFVDVLNQQCLRFLQMKRDSAEKKREGPLAFKQMSCCT VNEVQKFISDLGISKVNLAEADLETILKTVVYDGNAERVRQQDGSFVYRA VNAPLPPTGLVQMPCGICPVIKNCSNCGDVTAITCEYMRDWLD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16937-PA | 293 | GF16937-PA | 1..293 | 1..293 | 1477 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12523-PA | 293 | GG12523-PA | 1..293 | 1..293 | 1534 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19703-PA | 294 | GH19703-PA | 3..294 | 2..293 | 1361 | 85.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5380-PB | 293 | CG5380-PB | 1..293 | 1..293 | 1507 | 100 | Plus |
CG5380-PA | 293 | CG5380-PA | 1..293 | 1..293 | 1507 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22278-PA | 293 | GI22278-PA | 1..293 | 1..293 | 1381 | 87.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24167-PA | 293 | GL24167-PA | 1..293 | 1..293 | 1417 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18836-PA | 293 | GA18836-PA | 1..293 | 1..293 | 1417 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23658-PA | 293 | GM23658-PA | 1..293 | 1..293 | 1541 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18467-PA | 280 | GD18467-PA | 1..228 | 1..228 | 1171 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24071-PA | 293 | GJ24071-PA | 1..293 | 1..293 | 1354 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11949-PA | 295 | GK11949-PA | 4..295 | 2..293 | 1387 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24046-PA | 293 | GE24046-PA | 1..293 | 1..293 | 1533 | 99 | Plus |