BDGP Sequence Production Resources |
Search the DGRC for SD19625
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 196 |
Well: | 25 |
Vector: | pOT2 |
Associated Gene/Transcript | ATPsyn-beta-RB |
Protein status: | SD19625.pep: wuzgold |
Sequenced Size: | 1755 |
Gene | Date | Evidence |
---|---|---|
ATPsyn-beta-RB | 2010-01-13 | Manual selection by Sue Celniker |
1755 bp assembled on 2010-02-12
GenBank Submission: BT120330.1
> SD19625.complete TTAGTTCGAGAAAAATGTTCGCGTTACGTGCTGCATCTAAAGCCGATAAG AATTTGCTGCCATTCTTGGGGCAATTGTCTCGTAGCCATGCTGCCAAGGC TGCAAAGGCTGCAGCTGCCGCAAATGGAAAGATTGTGGCCGTAATTGGTG CAGTCGTCGATGTCCAGTTTGATGATAACTTACCGCCCATTCTGAATGCC TTGGAAGTAGACAACCGTTCTCCTCGGCTCGTGCTAGAGGTGGCCCAGCA CTTGGGAGAAAATACCGTGCGCACTATCGCCATGGATGGTACCGAAGGCT TGGTTCGCGGACAGAAGGTTCTCGATACTGGGTATCCTATCCGAATTCCA GTTGGTGCCGAAACACTAGGACGCATCATTAATGTTATTGGTAAGTAAAT TATATTAAAACATAAGAAAGAAATTAAGAAATTCTTTGAACAGGTGAACC CATTGATGAGCGTGGACCAATTGATACAGACAAGACCGCTGCCATTCATG CTGAGGCTCCTGAATTCGTTCAGATGTCTGTTGAGCAAGAGATTCTTGTC ACTGGAATCAAAGTCGTCGATCTCCTGGCTCCATACGCCAAAGGTGGTAA AATTGGGTTGTTTGGAGGTGCCGGTGTGGGCAAAACTGTGTTGATCATGG AGCTCATTAACAACGTGGCTAAAGCTCATGGTGGATACTCGGTTTTCGCG GGAGTTGGTGAACGCACTCGTGAGGGAAACGATTTATACAATGAGATGAT CGAGGGTGGTGTTATTTCACTAAAGGACAAGACCTCAAAGGTGGCTCTCG TATATGGGCAAATGAACGAGCCGCCAGGTGCTCGTGCCCGTGTTGCTCTA ACTGGACTGACCGTTGCAGAGTACTTCCGTGATCAAGAAGGACAGGATGT GTTGCTGTTTATCGACAACATTTTCCGATTTACTCAAGCTGGCTCAGAAG TGTCCGCTTTGTTGGGTCGTATTCCCTCAGCCGTCGGTTACCAGCCAACC TTGGCTACCGACATGGGTTCTATGCAGGAGCGTATTACCACCACCAAAAA GGGATCCATTACTTCTGTTCAGGCCATATATGTGCCCGCTGATGATTTGA CCGATCCTGCTCCTGCTACTACATTCGCTCATTTGGATGCCACCACTGTA CTCTCGCGTGCGATTGCCGAACTGGGTATTTACCCTGCTGTGGATCCACT GGATTCGACTTCTCGAATCATGGATCCCAACATCATTGGCCAAGAACACT ATAACGTTGCCCGTGGTGTGCAGAAAATCTTGCAAGACTACAAATCACTT CAGGATATAATAGCCATTCTCGGAATGGATGAGTTGTCTGAGGAAGATAA GCTCACAGTCGCTCGTGCTCGCAAGATTCAGCGTTTCTTGTCGCAGCCAT TCCAAGTTGCTGAAGTCTTCACCGGGCATGCTGGTAAACTAGTGCCCCTG GAGCAAACTATAAAAGGTTTCTCAGCAATTCTAGCTGGGGACTACGACCA TCTACCTGAAGTTGCTTTCTACATGGTCGGCCCAATCGAAGAAGTTGTAG AAAAGGCTGACCGCCTGGCAAAGGAAGCTGCCTAGATAGGCGTACTGGAA AAATCTTCAAAGTCAGCAAATCTATCATTGAATATTATGCATTGAATTTG TAATAAACTTTGTAAGATCAAATTAAATTCAATACAAGCGAAGAAAAAGT TAATAAAACCTATTTAAACATTACGGTATGAAAAAAAAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ATPsyn-beta.g | 1833 | ATPsyn-beta.g | 88..1819 | 1..1732 | 8660 | 100 | Plus |
ATPsyn-beta.h | 2158 | ATPsyn-beta.h | 88..1819 | 1..1732 | 8660 | 100 | Plus |
ATPsyn-beta.j | 2547 | ATPsyn-beta.j | 776..2065 | 443..1732 | 6450 | 100 | Plus |
ATPsyn-beta.j | 2547 | ATPsyn-beta.j | 387..778 | 1..392 | 1960 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr4 | 1351717 | chr4 | 1053426..1055077 | 79..1730 | 8260 | 100 | Plus |
chr3L | 24539361 | chr3L | 16088556..16089475 | 534..1453 | 1120 | 74.8 | Plus |
chr4 | 1351717 | chr4 | 1052390..1052467 | 1..78 | 390 | 100 | Plus |
chr3R | 27901430 | chr3R | 15744707..15744789 | 681..763 | 205 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
4 | 1348131 | 4 | 1032907..1034560 | 79..1732 | 8270 | 100 | Plus |
3L | 28110227 | 3L | 16098790..16099709 | 534..1453 | 1120 | 74.8 | Plus |
4 | 1348131 | 4 | 1031876..1031953 | 1..78 | 390 | 100 | Plus |
3R | 32079331 | 3R | 19920789..19920871 | 681..763 | 205 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
4 | 1331231 | 4 | 1032907..1034560 | 79..1732 | 8270 | 100 | Plus |
3L | 28103327 | 3L | 16092139..16092584 | 783..1228 | 625 | 76 | Plus |
4 | 1331231 | 4 | 1031876..1031953 | 1..78 | 390 | 100 | Plus |
3L | 28103327 | 3L | 16091890..16092110 | 534..754 | 325 | 76.4 | Plus |
3L | 28103327 | 3L | 16092645..16092809 | 1289..1453 | 315 | 79.3 | Plus |
3R | 31820162 | 3R | 19661620..19661702 | 681..763 | 205 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 627..694 | 1081..1148 | 115 | 63.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr4 | 1052390..1052467 | 1..78 | 100 | -> | Plus |
chr4 | 1053426..1055077 | 79..1730 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ATPsyn-beta-RA | 1..370 | 15..384 | 100 | == | Plus |
ATPsyn-beta-RA | 371..1518 | 436..1585 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ATPsyn-beta-RA | 1..370 | 15..384 | 100 | == | Plus |
ATPsyn-beta-RA | 371..1518 | 436..1585 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ATPsyn-beta-RA | 1..370 | 15..384 | 100 | == | Plus |
ATPsyn-beta-RA | 371..1518 | 436..1585 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ATPsyn-beta-RA | 1..370 | 15..384 | 100 | == | Plus |
ATPsyn-beta-RA | 371..1518 | 436..1585 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ATPsyn-beta-RA | 63..446 | 1..384 | 100 | == | Plus |
ATPsyn-beta-RA | 447..1730 | 436..1721 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ATPsyn-beta-RA | 63..446 | 1..384 | 100 | == | Plus |
ATPsyn-beta-RA | 447..1730 | 436..1721 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ATPsyn-beta-RB | 13..1741 | 1..1729 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ATPsyn-beta-RD | 13..396 | 1..384 | 100 | == | Plus |
ATPsyn-beta-RD | 397..1689 | 436..1730 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 1031876..1031953 | 1..78 | 100 | -> | Plus |
4 | 1032907..1034558 | 79..1730 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 1031876..1031953 | 1..78 | 100 | -> | Plus |
4 | 1032907..1034558 | 79..1730 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 1031876..1031953 | 1..78 | 100 | -> | Plus |
4 | 1032907..1034558 | 79..1730 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_4 | 1052502..1052579 | 1..78 | 100 | -> | Plus |
arm_4 | 1053533..1055184 | 79..1730 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 1032907..1034558 | 79..1730 | 100 | Plus | |
4 | 1031876..1031953 | 1..78 | 100 | -> | Plus |
Translation from 14 to 397
> SD19625.pep MFALRAASKADKNLLPFLGQLSRSHAAKAAKAAAAANGKIVAVIGAVVDV QFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQ KVLDTGYPIRIPVGAETLGRIINVIGK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21882-PA | 506 | GF21882-PA | 1..128 | 1..127 | 573 | 93.8 | Plus |
Dana\GF23766-PA | 638 | GF23766-PA | 105..195 | 37..126 | 286 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16404-PA | 505 | GG16404-PA | 1..127 | 1..127 | 643 | 99.2 | Plus |
Dere\GG15949-PA | 630 | GG15949-PA | 105..195 | 37..126 | 265 | 60.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23965-PA | 506 | GH23965-PA | 1..128 | 1..127 | 618 | 96.1 | Plus |
Dgri\GH16852-PA | 659 | GH16852-PA | 121..211 | 37..126 | 287 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ATPsynbeta-PD | 505 | CG11154-PD | 1..127 | 1..127 | 620 | 99.2 | Plus |
ATPsynbeta-PA | 505 | CG11154-PA | 1..127 | 1..127 | 620 | 99.2 | Plus |
ATPsynbeta-PC | 511 | CG11154-PC | 1..133 | 1..127 | 603 | 94.7 | Plus |
ATPsynbetaL-PA | 622 | CG5389-PA | 104..193 | 38..126 | 267 | 62.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14045-PA | 506 | GI14045-PA | 1..128 | 1..127 | 560 | 91.4 | Plus |
Dmoj\GI13073-PA | 618 | GI13073-PA | 71..161 | 37..126 | 291 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18400-PA | 506 | GL18400-PA | 1..128 | 1..127 | 569 | 93 | Plus |
Dper\GL25088-PA | 661 | GL25088-PA | 112..202 | 37..126 | 282 | 63 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\ATPsyn-beta-PA | 506 | GA10801-PA | 1..128 | 1..127 | 569 | 93 | Plus |
Dpse\GA18845-PA | 675 | GA18845-PA | 129..219 | 37..126 | 280 | 62 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13022-PA | 387 | GM13022-PA | 1..127 | 1..127 | 642 | 99.2 | Plus |
Dsec\GM25584-PA | 625 | GM25584-PA | 107..196 | 38..126 | 267 | 62.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\ATPsyn-beta-PA | 439 | GD24417-PA | 22..61 | 88..127 | 200 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\ATPsyn-beta-PA | 506 | GJ13622-PA | 1..128 | 1..127 | 559 | 93 | Plus |
Dvir\GJ13823-PA | 611 | GJ13823-PA | 42..132 | 37..126 | 277 | 60.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13685-PA | 506 | GK13685-PA | 1..128 | 1..127 | 564 | 91.4 | Plus |
Dwil\GK24170-PA | 685 | GK24170-PA | 118..208 | 37..126 | 294 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\ATPsyn-beta-PA | 505 | GE14564-PA | 1..127 | 1..127 | 639 | 98.4 | Plus |
Dyak\GE23170-PA | 627 | GE23170-PA | 82..195 | 24..126 | 266 | 50 | Plus |
Dyak\GE22293-PA | 627 | GE22293-PA | 105..195 | 37..126 | 265 | 60.4 | Plus |
Translation from 523 to 1584
> SD19625.hyp MSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAK AHGGYSVFAGVGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMNEP PGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRI PSAVGYQPTLATDMGSMQERITTTKKGSITSVQAIYVPADDLTDPAPATT FAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQ KILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFT GHAGKLVPLEQTIKGFSAILAGDYDHLPEVAFYMVGPIEEVVEKADRLAK EAA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ATPsyn-beta-PD | 505 | CG11154-PD | 153..505 | 1..353 | 1765 | 100 | Plus |
ATPsyn-beta-PA | 505 | CG11154-PA | 153..505 | 1..353 | 1765 | 100 | Plus |
ATPsyn-beta-PC | 511 | CG11154-PC | 159..511 | 1..353 | 1765 | 100 | Plus |
ms(3)72Dt-PA | 622 | CG5389-PA | 220..568 | 1..349 | 1492 | 81.9 | Plus |
Vha68-3-PA | 743 | CG5075-PA | 349..644 | 8..291 | 297 | 29.4 | Plus |