Clone SD20009 Report

Search the DGRC for SD20009

Clone and Library Details

Library:SD
Tissue Source:Drosophila melanogaster Schneider L2 cell culture
Created by:Ling Hong
Date Registered:1999-02-25
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:200
Well:9
Vector:pOT2
Associated Gene/TranscriptCG6428-RA
Protein status:SD20009.pep: gold
Preliminary Size:1896
Sequenced Size:2641

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6428 2002-01-01 Sim4 clustering to Release 2
CG6428 2002-05-18 Blastp of sequenced clone
CG6428 2003-01-01 Sim4 clustering to Release 3
CG6428 2008-04-29 Release 5.5 accounting
CG6428 2008-08-15 Release 5.9 accounting
CG6428 2008-12-18 5.12 accounting

Clone Sequence Records

SD20009.complete Sequence

2641 bp (2641 high quality bases) assembled on 2002-05-18

GenBank Submission: AY119242

> SD20009.complete
TCGTGGGCCAAAGTCTGGTGCGGTTATCTATATATAAGTGATTGCGCCGC
CGTGATTTGGGCTTTTCGTTTCAATTTCCTCTGCGATAGAGTCCCAATAC
CACGTGCTATCTCGGCGTCCCCCCGCGAATTATTATTTCACTACTTCGGA
TCCGATCCGGATTAGCACGATAACGAGTTGGCCAAATAATCATCAACGGC
ACGGGCTGTTAATGGATTTGCTGTTTACGCGTCGGAACGACACCATCTGA
GCAGCCAGTGATAAGGCACACAGCTTCGCAACCGGCGCTCCGCAGTCCAT
CTTCTATACTCTTTACTCTATATTATGGATATTCCCGTCCTGAAGACCAA
TGGTCACGAGAGGCTGGCCTCGCTGGACAAAAGCATGCCGCCGGCATCGC
CCACTCTGCCGAGTCCCACGATCCGCAGGAATAAAAGTGATGGAAAACTC
ATGGCCCAGGATGTCAAGGAGGCCCGGGTGAAGGTCATCTACACTGGCGG
CACCATCGGCATGGTGCGCAACGAGCGGAATGTGTTAGCTCCCATTCCCA
ATGCCCTGGTGCGCAGCATCCGCAAATATCCAAACATCCACGATGAGGAG
TACGCGCTGCGCCGCTTTGGAGCATCTGCATCGATGGCTCCACTGGTGCT
GCCCATTGTGCAGGGCGTAGATCGCCGGGTTATCTACCAGATCTCGGAAT
ATACACCGCTGCTGGACAGCAGCAATATGACGATGAACGATTGGGCGCGA
ATCGCCAGCGATATTCAGCAATCGTACGAGTTCTTCGATGGCTTTGTGGT
GCTCCATGGCACCGACACGCTTTCCTACACCGCATCTGCATTGTCTTTCA
TGTTGGAAAATTTGGGCAAGACGGTGATCATCACGGGCTCCCAAATACCC
ATCTTTGAGACGCGAACAGATGGCAAGGACAATTTTACATCAGCCTTGAT
CATAGCCGGTAACTACATCATTCCGGAGGTTTGCATCTTCTTTGGCCATA
AGTTGATGCGCGGCAATCGGACGGTGAAGGTCAGTTCGAATGCCTTGGAC
GCGTTCGACTCACCGAATGTTCCGCCGCTGGCCAGGATCGGCATTGATGT
GAACGTCGACTACCGCCTGATATTCCGGCCATGCACCATTGAAAGGTTTT
GCGTACACTTGAATCTCGACGAGAACGTCGGCTTGCTGCGAATCTTTCCG
AGCATTTCGCACTCCACATTCCGGGCTTTCCTGGCGCCACCGATTCGCGG
CGTTGTCCTGCAATCCTTCGGATCTGGAAACATACCATCGAACCGAAAAG
ATCTCATCGATGAACTGCGTGCGGCTGGCGAACGAGGCGTTATCATCATC
AATTGTACACAGTGTCCCAATGGCACAGTGGCGGAGATCTACGATACGGG
CAAGGTGCTCTGCGATGTCGGTGTAATTCCCGGTTTCGATATGACGCCCG
AGGCGGCGCTGGCAAAGCTGGCCTATGTCATCGGCAAGGAGGAGTGGTCA
CTCGATATGAAGAAGCAGATGATGCAGTCAAGCCTGAGGGGCGAACTGAC
CTCCTTAAAGGCTCCCAAAATGGAGGACTACGACTTGGTGGACGCAGTGG
CACGGTCTCTGCACTTGTCCTCGCCCCAAGAACTGGATCAGCTGGGCGAA
ACGCTCTTTCCGGCCATGATCAACGCCGCTGTGGCCGAAGGTGATCCCAA
GAAGATCAACAACTTGAAAGCCTATGGCGCCGACTTGTCGGGCACGAATC
ATGACCAGCGAACGGCCCTGCACTTGGCTTGTCAGCTGGGAAACGTGGAG
ATCGTTAAGTACCTACTGCAGAACGGGGTGTCCGTGCACGTGCGTGATCG
GTATGACCGCACTCCACTTCTGGAGGCTGTCGCCACCGATAGCCACGAGA
TCATCCAGTTGCTCATCAACTGTGGTGCTCATTTGACGGGCTCTTCGCGA
GCGGTGGGCGAGCAATTGTGCGCGGCCGCTGCTAGGGGATCGATGATCAG
ATTGAAGTCCTATCAATACGCCGGTGCCGATCTTGCCCAGTCGGATCCTT
CGGGCAGGACGGCCTTGCACGTGGCAGCACTGCACGGATTTCCGGAGGTG
GTGCAATACGTCCTGCCCTATTTCGAGAATCCGAACGAGAAGGACATGCT
CGGCCTGACCGCCATGGATTATGCGGAGCGCGGCGGACACGCAGCGGTTA
TGGAGGTCCTAAAATCATAGAAATCTCTTCCGAACCATACATACCTCGTT
CCTTGTTCCTGCAGCATGAAGAAAAAAACAAACACTGGAGGCTAGGGTTA
TTTCTTTTGTACTTAAGTGTTGCATCTAGTCTAATGGTTCCTTATTATCA
GTTTTGCATAACTCGCATATTAACGATGTTGTCGTGGTAGTTTTTATTAT
TAAGTGTCGAAATGTTTACCTAATCCCTGACCTGTTTTTAAGTAGTCCTT
ATTTACTAATGTATCCATTGTATGCAATAATATTATTAGCCAAAACCAAA
AATTAACCAATCATGTCTAAAATTAAGCATCAGACATATTAAACGGTTGT
ATAACAAGTTATATACACAAACTAGTATAATTTGTTGTATGAAAATAAAT
AAAATCAATTTGAAATTAAAAAAAAAAAAAAAAAAAAAAAA

SD20009.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:00:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG6428-RA 2774 CG6428-RA 158..2571 1..2411 11820 99.3 Plus
CG6428-RA 2774 CG6428-RA 2570..2767 2422..2619 990 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:02:22
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 3858764..3859864 2617..1517 5460 99.7 Minus
chrX 22417052 chrX 3859929..3860680 1518..767 3625 98.8 Minus
chrX 22417052 chrX 3861383..3861917 532..1 2550 98.9 Minus
chrX 22417052 chrX 3860750..3860986 768..532 1125 98.3 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:57:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:02:20
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 3965433..3966523 2619..1517 5270 98.7 Minus
X 23542271 X 3966588..3967339 1518..767 3640 98.9 Minus
X 23542271 X 3968030..3968564 532..1 2565 99.1 Minus
X 23542271 X 3967397..3967633 768..532 1185 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:32:05
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 3973727..3974621 2411..1517 4445 99.7 Minus
X 23527363 X 3974686..3975437 1518..767 3640 98.9 Minus
X 23527363 X 3976128..3976662 532..1 2575 99 Minus
X 23527363 X 3975495..3975731 768..532 1185 100 Minus
X 23527363 X 3973531..3973728 2619..2422 990 100 Minus
Blast to na_te.dros performed 2019-03-15 20:02:20
Subject Length Description Subject Range Query Range Score Percent Strand
297 6995 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). 6450..6509 2360..2299 116 69.8 Minus

SD20009.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:03:26 Download gff for SD20009.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 3858764..3859862 1519..2617 99 <- Minus
chrX 3859929..3860678 769..1518 98 <- Minus
chrX 3860750..3860985 533..768 98 <- Minus
chrX 3861383..3861917 1..532 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 21:09:34 Download gff for SD20009.complete
Subject Subject Range Query Range Percent Splice Strand
CG6428-RA 1..1896 325..2220 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:40:11 Download gff for SD20009.complete
Subject Subject Range Query Range Percent Splice Strand
CG6428-RA 1..1896 325..2220 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:18:25 Download gff for SD20009.complete
Subject Subject Range Query Range Percent Splice Strand
CG6428-RA 1..1896 325..2220 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:32:07 Download gff for SD20009.complete
Subject Subject Range Query Range Percent Splice Strand
CG6428-RA 1..1896 325..2220 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:13:45 Download gff for SD20009.complete
Subject Subject Range Query Range Percent Splice Strand
CG6428-RA 1..1896 325..2220 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:13:51 Download gff for SD20009.complete
Subject Subject Range Query Range Percent Splice Strand
CG6428-RA 1..2608 1..2617 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:40:11 Download gff for SD20009.complete
Subject Subject Range Query Range Percent Splice Strand
CG6428-RA 1..2608 1..2617 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:18:25 Download gff for SD20009.complete
Subject Subject Range Query Range Percent Splice Strand
CG6428-RA 92..2699 1..2617 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:32:07 Download gff for SD20009.complete
Subject Subject Range Query Range Percent Splice Strand
CG6428-RA 1..2608 1..2617 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:13:45 Download gff for SD20009.complete
Subject Subject Range Query Range Percent Splice Strand
CG6428-RA 92..2699 1..2617 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:03:26 Download gff for SD20009.complete
Subject Subject Range Query Range Percent Splice Strand
X 3965435..3966521 1519..2617 98 <- Minus
X 3966588..3967337 769..1518 98 <- Minus
X 3967397..3967632 533..768 100 <- Minus
X 3968030..3968564 1..532 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:03:26 Download gff for SD20009.complete
Subject Subject Range Query Range Percent Splice Strand
X 3965435..3966521 1519..2617 98 <- Minus
X 3966588..3967337 769..1518 98 <- Minus
X 3967397..3967632 533..768 100 <- Minus
X 3968030..3968564 1..532 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:03:26 Download gff for SD20009.complete
Subject Subject Range Query Range Percent Splice Strand
X 3965435..3966521 1519..2617 98 <- Minus
X 3966588..3967337 769..1518 98 <- Minus
X 3967397..3967632 533..768 100 <- Minus
X 3968030..3968564 1..532 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:18:25 Download gff for SD20009.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 3859468..3860554 1519..2617 98 <- Minus
arm_X 3860621..3861370 769..1518 98 <- Minus
arm_X 3861430..3861665 533..768 100 <- Minus
arm_X 3862063..3862597 1..532 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:04:32 Download gff for SD20009.complete
Subject Subject Range Query Range Percent Splice Strand
X 3973533..3974619 1519..2617 98 <- Minus
X 3974686..3975435 769..1518 98 <- Minus
X 3975495..3975730 533..768 100 <- Minus
X 3976128..3976662 1..532 99   Minus

SD20009.pep Sequence

Translation from 324 to 2219

> SD20009.pep
MDIPVLKTNGHERLASLDKSMPPASPTLPSPTIRRNKSDGKLMAQDVKEA
RVKVIYTGGTIGMVRNERNVLAPIPNALVRSIRKYPNIHDEEYALRRFGA
SASMAPLVLPIVQGVDRRVIYQISEYTPLLDSSNMTMNDWARIASDIQQS
YEFFDGFVVLHGTDTLSYTASALSFMLENLGKTVIITGSQIPIFETRTDG
KDNFTSALIIAGNYIIPEVCIFFGHKLMRGNRTVKVSSNALDAFDSPNVP
PLARIGIDVNVDYRLIFRPCTIERFCVHLNLDENVGLLRIFPSISHSTFR
AFLAPPIRGVVLQSFGSGNIPSNRKDLIDELRAAGERGVIIINCTQCPNG
TVAEIYDTGKVLCDVGVIPGFDMTPEAALAKLAYVIGKEEWSLDMKKQMM
QSSLRGELTSLKAPKMEDYDLVDAVARSLHLSSPQELDQLGETLFPAMIN
AAVAEGDPKKINNLKAYGADLSGTNHDQRTALHLACQLGNVEIVKYLLQN
GVSVHVRDRYDRTPLLEAVATDSHEIIQLLINCGAHLTGSSRAVGEQLCA
AAARGSMIRLKSYQYAGADLAQSDPSGRTALHVAALHGFPEVVQYVLPYF
ENPNEKDMLGLTAMDYAERGGHAAVMEVLKS*

SD20009.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 04:14:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\lyso-PA 655 GF19463-PA 22..653 1..631 3109 91.3 Plus
Dana\GF17845-PA 601 GF17845-PA 11..585 48..630 1564 49.7 Plus
Dana\GF10143-PA 1233 GF10143-PA 270..463 449..629 175 29.4 Plus
Dana\GF19976-PA 909 GF19976-PA 70..254 431..631 165 28.4 Plus
Dana\GF16435-PA 2115 GF16435-PA 1348..1501 479..629 161 33.1 Plus
Dana\GF16435-PA 2115 GF16435-PA 1379..1600 405..629 157 27.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 04:14:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18566-PA 636 GG18566-PA 6..636 1..631 3248 95.9 Plus
Dere\GG17203-PA 605 GG17203-PA 11..589 48..630 1615 51.8 Plus
Dere\GG12063-PA 2124 GG12063-PA 1356..1509 479..629 162 33.1 Plus
Dere\GG16463-PA 1551 GG16463-PA 652..813 468..630 161 31.9 Plus
Dere\GG15054-PA 1254 GG15054-PA 291..484 449..629 161 27.8 Plus
Dere\GG12063-PA 2124 GG12063-PA 1387..1608 405..629 156 27.2 Plus
Dere\GG16463-PA 1551 GG16463-PA 534..713 449..629 156 28.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 04:14:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24648-PA 677 GH24648-PA 55..672 23..631 2728 81.1 Plus
Dgri\GH23945-PA 1653 GH23945-PA 499..698 429..629 195 29.9 Plus
Dgri\GH16134-PA 1255 GH16134-PA 291..484 449..629 182 30.4 Plus
Dgri\GH23945-PA 1653 GH23945-PA 622..798 460..630 163 29.9 Plus
Dgri\GH16234-PA 2124 GH16234-PA 1353..1506 479..629 163 33.1 Plus
Dgri\GH16234-PA 2124 GH16234-PA 1384..1605 405..629 156 27.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:12:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG6428-PA 631 CG6428-PA 1..631 1..631 3234 100 Plus
CG8526-PA 605 CG8526-PA 11..589 48..630 1549 51.5 Plus
CG8526-PB 604 CG8526-PB 11..588 48..630 1536 51.5 Plus
Ank-PE 1549 CG1651-PE 648..813 464..630 179 33.3 Plus
Ank-PD 1549 CG1651-PD 648..813 464..630 179 33.3 Plus
Ank-PC 1549 CG1651-PC 648..813 464..630 179 33.3 Plus
Ank-PB 1549 CG1651-PB 648..813 464..630 179 33.3 Plus
CG10011-PA 2119 CG10011-PA 1382..1603 405..629 171 25.8 Plus
Ank-PE 1549 CG1651-PE 534..713 449..629 170 29.7 Plus
Ank-PD 1549 CG1651-PD 534..713 449..629 170 29.7 Plus
Ank-PC 1549 CG1651-PC 534..713 449..629 170 29.7 Plus
Ank-PB 1549 CG1651-PB 534..713 449..629 170 29.7 Plus
CG10011-PA 2119 CG10011-PA 1351..1504 479..629 169 31.8 Plus
mask-PF 3623 CG33106-PF 1969..2156 445..629 169 33.7 Plus
mask-PD 3636 CG33106-PD 1982..2169 445..629 169 33.7 Plus
mask-PE 4000 CG33106-PE 2346..2533 445..629 169 33.7 Plus
mask-PB 4001 CG33106-PB 2347..2534 445..629 169 33.7 Plus
mask-PA 4001 CG33106-PA 2347..2534 445..629 169 33.7 Plus
mask-PC 4010 CG33106-PC 2356..2543 445..629 169 33.7 Plus
TrpA1-PK 1195 CG5751-PK 305..498 449..629 168 28.4 Plus
TrpA1-PJ 1196 CG5751-PJ 270..463 449..629 168 28.4 Plus
TrpA1-PI 1197 CG5751-PI 270..463 449..629 168 28.4 Plus
TrpA1-PH 1231 CG5751-PH 305..498 449..629 168 28.4 Plus
TrpA1-PG 1232 CG5751-PG 305..498 449..629 168 28.4 Plus
N-PB 2703 CG3936-PB 1933..2095 461..621 166 32.5 Plus
N-PA 2703 CG3936-PA 1933..2095 461..621 166 32.5 Plus
CG10011-PA 2119 CG10011-PA 1606..1805 429..631 165 26 Plus
mib1-PB 1115 CG5841-PB 506..678 461..629 161 27.7 Plus
mib1-PA 1226 CG5841-PA 617..789 461..629 161 27.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 04:14:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21703-PA 648 GI21703-PA 7..637 7..629 2577 79.1 Plus
Dmoj\GI24275-PA 569 GI24275-PA 1..565 64..631 1359 45.2 Plus
Dmoj\GI12404-PA 1225 GI12404-PA 264..457 449..629 187 30.4 Plus
Dmoj\GI22180-PA 2153 GI22180-PA 1385..1538 479..629 161 33.1 Plus
Dmoj\GI22180-PA 2153 GI22180-PA 1416..1637 405..629 159 27.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 04:14:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14545-PA 653 GL14545-PA 19..648 1..631 3089 90.2 Plus
Dper\GL24314-PA 606 GL24314-PA 12..591 48..630 1653 53.3 Plus
Dper\GL14414-PA 358 GL14414-PA 1..358 43..410 967 54.7 Plus
Dper\GL26039-PA 360 GL26039-PA 1..360 43..410 953 54.5 Plus
Dper\GL14407-PA 229 GL14407-PA 4..229 184..410 571 52.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 04:14:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19585-PA 653 GA19585-PA 19..648 1..631 3085 90 Plus
Dpse\GA21138-PA 606 GA21138-PA 12..591 48..630 1651 53.2 Plus
Dpse\GA28149-PA 360 GA28149-PA 1..360 43..410 962 54.7 Plus
Dpse\GA24459-PA 280 GA24459-PA 1..257 63..328 665 53.9 Plus
Dpse\GA28660-PA 1137 GA28660-PA 270..463 449..629 171 28.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 04:14:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12708-PA 631 GM12708-PA 1..631 1..631 3316 98.1 Plus
Dsec\GM23844-PA 604 GM23844-PA 10..588 48..630 1601 51.5 Plus
Dsec\GM23234-PA 1543 GM23234-PA 534..713 449..629 186 31.1 Plus
Dsec\GM24910-PA 1274 GM24910-PA 290..483 449..629 165 28.4 Plus
Dsec\GM16283-PA 2118 GM16283-PA 1350..1503 479..629 163 33.1 Plus
Dsec\GM23234-PA 1543 GM23234-PA 648..813 464..630 160 32.1 Plus
Dsec\GM16283-PA 2118 GM16283-PA 1381..1602 405..629 156 27.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 04:14:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18651-PA 604 GD18651-PA 10..588 48..630 1599 51.4 Plus
Dsim\GD17975-PA 98 GD17975-PA 1..86 63..148 449 98.8 Plus
Dsim\GD12958-PA 1093 GD12958-PA 146..339 449..629 164 28.4 Plus
Dsim\GD18026-PA 2130 GD18026-PA 1362..1515 479..629 163 33.1 Plus
Dsim\GD18026-PA 2130 GD18026-PA 1393..1614 405..629 156 27.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 04:14:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15882-PA 656 GJ15882-PA 38..651 18..631 2639 81.6 Plus
Dvir\GJ23054-PA 594 GJ23054-PA 12..588 48..629 1505 50.2 Plus
Dvir\GJ19213-PA 1869 GJ19213-PA 791..971 449..629 213 32.6 Plus
Dvir\GJ12294-PA 1228 GJ12294-PA 265..458 449..629 182 30.4 Plus
Dvir\GJ24299-PA 2125 GJ24299-PA 1356..1509 479..629 163 33.1 Plus
Dvir\GJ19213-PA 1869 GJ19213-PA 895..1071 460..630 162 29.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 04:14:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15547-PA 656 GK15547-PA 26..653 3..631 2914 85.7 Plus
Dwil\GK12755-PA 608 GK12755-PA 12..594 48..631 1630 53.1 Plus
Dwil\GK23823-PA 521 GK23823-PA 4..516 37..530 1152 47.4 Plus
Dwil\GK23919-PA 359 GK23919-PA 4..357 48..409 820 49 Plus
Dwil\GK23823-PA 521 GK23823-PA 375..516 482..629 305 42.6 Plus
Dwil\GK17464-PA 1237 GK17464-PA 275..467 449..629 165 29 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 04:14:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16877-PA 631 GE16877-PA 1..631 1..631 3261 95.9 Plus
Dyak\GE25993-PA 605 GE25993-PA 11..589 48..630 1587 51.1 Plus
Dyak\GE14529-PA 1554 GE14529-PA 651..812 468..630 171 32.5 Plus
Dyak\GE21276-PA 1238 GE21276-PA 290..483 449..629 164 28.4 Plus
Dyak\GE10505-PA 2117 GE10505-PA 1358..1511 479..629 162 33.1 Plus
Dyak\GE10505-PA 2117 GE10505-PA 1389..1610 405..629 158 27.2 Plus

SD20009.hyp Sequence

Translation from 324 to 2219

> SD20009.hyp
MDIPVLKTNGHERLASLDKSMPPASPTLPSPTIRRNKSDGKLMAQDVKEA
RVKVIYTGGTIGMVRNERNVLAPIPNALVRSIRKYPNIHDEEYALRRFGA
SASMAPLVLPIVQGVDRRVIYQISEYTPLLDSSNMTMNDWARIASDIQQS
YEFFDGFVVLHGTDTLSYTASALSFMLENLGKTVIITGSQIPIFETRTDG
KDNFTSALIIAGNYIIPEVCIFFGHKLMRGNRTVKVSSNALDAFDSPNVP
PLARIGIDVNVDYRLIFRPCTIERFCVHLNLDENVGLLRIFPSISHSTFR
AFLAPPIRGVVLQSFGSGNIPSNRKDLIDELRAAGERGVIIINCTQCPNG
TVAEIYDTGKVLCDVGVIPGFDMTPEAALAKLAYVIGKEEWSLDMKKQMM
QSSLRGELTSLKAPKMEDYDLVDAVARSLHLSSPQELDQLGETLFPAMIN
AAVAEGDPKKINNLKAYGADLSGTNHDQRTALHLACQLGNVEIVKYLLQN
GVSVHVRDRYDRTPLLEAVATDSHEIIQLLINCGAHLTGSSRAVGEQLCA
AAARGSMIRLKSYQYAGADLAQSDPSGRTALHVAALHGFPEVVQYVLPYF
ENPNEKDMLGLTAMDYAERGGHAAVMEVLKS*

SD20009.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:40:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG6428-PA 631 CG6428-PA 1..631 1..631 3234 100 Plus
CG8526-PA 605 CG8526-PA 11..589 48..630 1549 51.5 Plus
CG8526-PB 604 CG8526-PB 11..588 48..630 1536 51.5 Plus
Ank-PE 1549 CG1651-PE 648..813 464..630 179 33.3 Plus
Ank-PD 1549 CG1651-PD 648..813 464..630 179 33.3 Plus
Ank-PE 1549 CG1651-PE 534..713 449..629 170 29.7 Plus