BDGP Sequence Production Resources |
Search the DGRC for SD20374
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 203 |
Well: | 74 |
Vector: | pOT2 |
Associated Gene/Transcript | CG33108-RB |
Protein status: | SD20374.pep: gold |
Sequenced Size: | 1709 |
Gene | Date | Evidence |
---|---|---|
CG33108-RB | 2011-02-22 | Manual selection by Sue Celniker |
1709 bp assembled on 2011-03-18
GenBank Submission: BT126150.1
> SD20374.complete TTTGTCTGCGAAAACAGCTGTGGCTATTGTCTGTTAACTCGCTTAGTCTA TTTATTTAACTAAATACCATGTCGAATATTTCAAGTGTGGCACCACCTCC TCCCCCACCACCCATGATAGTCACTCCTAGCACACCTGCTACCACAAAGG AACGTCCAGTTGGGGACAATATAACCACCGATGAGTGCACTTGGGCATGT GAGTATCCTGAGGTGCAGAAAGGATGCTATTTAAGTCGCGTCTGCCAATA TACACCACCGAAACACTGTCAATACTACTCCGTAAACAGCATAGTGCAGG TGGGACCTACTTGTGGCTTAGTGGCCCTCAGCATGTTGCTTGGTGGCAGT CCCACGGCAGATGATCTCCTCAAGGATGCAATCGACCAGGAGTATACCCT TAATGGTGAACTATTTAGTGCTCAGTATTTGTTTGAACTGACCCGGAAGC ATATGCCAGGACCTGCTGCGTGTCAGTTGCATGTAGGTCCTTTGGACTGC AAAAAAGTCAAGGAACTTTTAAAGGCCGGAGGCTGCCTACTAGTGCCGTA TCCTTTTTCAAAAATATTGCCATTTAAACCCGGGTTGAGTTTGGTATTCC CCTGCATTTAAAGCCGTTGGCGCCTAACAGCACTTGTAAACGGTGAACAG CACACTGTTGTCTGGCAGTGTTGTAAAACTCGCGGTAGTTCAGTGGTGCA ACTTATAAACAGCGTTTTGTGTTTCGCAAAATAATATACAATTTTCAGTC AGTAAGTAAACGAGAAGTGCAAATACTTTTATTAAATGGCCGACGAAACA GAGCAGGTATGTGTAAGAATAAAAGCGAAAAGGATATTCTCTATATTCCG TACTTGCAGCTCAGTCAGGTGATTTTGCCGGTAAAGGAGCCTTTGGATCT CATCCGATTGAGTTTAGATGAGAAGGTGTACGTAAAGATGCGCAACGAGC GGGAACTGCGAGGACGTCTTCACGCCTTTGATCAGCATTTGAACATGGTG CTCGGCGATGCGGAGGAGACGGTGACCACTGTGGAGATCGACGAGGAGAC CTATGAGGAGGTGTACAAGACCGCCAAGCGCACTATTCCCATGCTATTCG TTAGAGGCGATGGAGTCATCCTGGTTTCGCCACCCATGCGGGTGGGCTAG CGGGTCTTGTTTAGCTTTAAATCAATTACCTGCATTTATACAAGCTATAT CTAAATAGGTTTATAAATGTCTTTTAAAAAAAATAATGTCTTGTTTAATT TTTGCTTACTATATAAATATATAAAAATCTTTTCTATGGGTTGTCCTTAA TCAATTGTAATTTCAAAAGCTACGATGCCGATGTAAACCATGCGCCATGC GTTAAAAATGGACACCGAGCCCATTGGGCTTTGATTGTAGGTTATCTGGT GGACACGCAGGACCGGTTTTATGTCCTGGCTCGTCATGGTAAATCTCGTA ACCTAGCCGTTTGGCCACTGGACACGCTCAGCCAAAGCAACGAAAATTTA AAAGAGTTTGCCCAACCCAAGGGCTACCCAGATGATGAGTTTCTGCTGCC ACCGGGTGGAATCGGTGGATCTCTGGGCCTCAACGAGCGCTGCATTCTTG TCAACGGGCTGCCAAAGCAGGTGATTCATGTTCGCTGGTCCTAAATATGT GCATCGAAATATTTTCAATAAAAAAAAACCTTTTTTAATTAAAAAAAAAA AAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 19819427..19820103 | 298..974 | 3385 | 100 | Plus |
chr3R | 27901430 | chr3R | 19820163..19820605 | 974..1416 | 2215 | 100 | Plus |
chr3R | 27901430 | chr3R | 19819065..19819366 | 1..302 | 1510 | 100 | Plus |
chr3R | 27901430 | chr3R | 19820663..19820938 | 1416..1690 | 1270 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 23996030..23996706 | 298..974 | 3385 | 100 | Plus |
3R | 32079331 | 3R | 23996766..23997208 | 974..1416 | 2215 | 100 | Plus |
3R | 32079331 | 3R | 23995668..23995969 | 1..302 | 1510 | 100 | Plus |
3R | 32079331 | 3R | 23997266..23997542 | 1416..1691 | 1275 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 23736861..23737537 | 298..974 | 3385 | 100 | Plus |
3R | 31820162 | 3R | 23737597..23738039 | 974..1416 | 2215 | 100 | Plus |
3R | 31820162 | 3R | 23736499..23736800 | 1..302 | 1510 | 100 | Plus |
3R | 31820162 | 3R | 23738097..23738373 | 1416..1691 | 1295 | 98.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19819065..19819363 | 1..299 | 100 | -> | Plus |
chr3R | 19820163..19820605 | 974..1416 | 100 | -> | Plus |
chr3R | 19819429..19820102 | 300..973 | 100 | -> | Plus |
chr3R | 19820664..19820938 | 1417..1690 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33108-RB | 1..543 | 69..611 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33108-RB | 1..543 | 69..611 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33108-RB | 1..543 | 69..611 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33108-RB | 1..714 | 3..716 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33108-RB | 10..725 | 1..716 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33108-RB | 10..725 | 1..716 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23997267..23997541 | 1417..1690 | 98 | Plus | |
3R | 23996766..23997208 | 974..1416 | 100 | -> | Plus |
3R | 23995668..23995966 | 1..299 | 100 | -> | Plus |
3R | 23996032..23996705 | 300..973 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23997267..23997541 | 1417..1690 | 98 | Plus | |
3R | 23996766..23997208 | 974..1416 | 100 | -> | Plus |
3R | 23995668..23995966 | 1..299 | 100 | -> | Plus |
3R | 23996032..23996705 | 300..973 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23997267..23997541 | 1417..1690 | 98 | Plus | |
3R | 23996766..23997208 | 974..1416 | 100 | -> | Plus |
3R | 23995668..23995966 | 1..299 | 100 | -> | Plus |
3R | 23996032..23996705 | 300..973 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19821390..19821688 | 1..299 | 100 | -> | Plus |
arm_3R | 19821754..19822427 | 300..973 | 100 | -> | Plus |
arm_3R | 19822488..19822930 | 974..1416 | 100 | -> | Plus |
arm_3R | 19822989..19823263 | 1417..1690 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23736499..23736797 | 1..299 | 100 | -> | Plus |
3R | 23736863..23737536 | 300..973 | 100 | -> | Plus |
3R | 23737597..23738039 | 974..1416 | 100 | -> | Plus |
3R | 23738098..23738372 | 1417..1690 | 98 | Plus |
Translation from 68 to 610
> SD20374.pep MSNISSVAPPPPPPPMIVTPSTPATTKERPVGDNITTDECTWACEYPEVQ KGCYLSRVCQYTPPKHCQYYSVNSIVQVGPTCGLVALSMLLGGSPTADDL LKDAIDQEYTLNGELFSAQYLFELTRKHMPGPAACQLHVGPLDCKKVKEL LKAGGCLLVPYPFSKILPFKPGLSLVFPCI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17032-PA | 301 | GF17032-PA | 22..171 | 21..176 | 544 | 69.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18482-PA | 264 | GH18482-PA | 33..160 | 34..161 | 461 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33108-PB | 180 | CG33108-PB | 1..180 | 1..180 | 983 | 100 | Plus |
CG33108-PA | 267 | CG33108-PA | 1..161 | 1..161 | 880 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24143-PA | 268 | GI24143-PA | 27..164 | 24..161 | 460 | 59.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23392-PA | 267 | GL23392-PA | 17..163 | 18..161 | 538 | 69.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA29224-PA | 167 | GA29224-PA | 21..75 | 24..78 | 220 | 72.7 | Plus |
Dpse\GA30188-PA | 159 | GA30188-PA | 1..55 | 109..161 | 210 | 72.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26548-PA | 267 | GM26548-PA | 1..161 | 1..161 | 778 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24658-PA | 266 | GJ24658-PA | 34..162 | 33..161 | 479 | 65.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14178-PA | 256 | GK14178-PA | 38..175 | 37..176 | 451 | 59.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23437-PA | 267 | GE23437-PA | 1..161 | 1..161 | 670 | 85.7 | Plus |
Translation from 68 to 610
> SD20374.hyp MSNISSVAPPPPPPPMIVTPSTPATTKERPVGDNITTDECTWACEYPEVQ KGCYLSRVCQYTPPKHCQYYSVNSIVQVGPTCGLVALSMLLGGSPTADDL LKDAIDQEYTLNGELFSAQYLFELTRKHMPGPAACQLHVGPLDCKKVKEL LKAGGCLLVPYPFSKILPFKPGLSLVFPCI*