BDGP Sequence Production Resources |
Search the DGRC for SD20537
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 205 |
Well: | 37 |
Vector: | pOT2 |
Associated Gene/Transcript | spz-RK |
Protein status: | SD20537.pep: gold |
Preliminary Size: | 1267 |
Sequenced Size: | 1777 |
Gene | Date | Evidence |
---|---|---|
CG6134 | 2002-11-07 | Blastp of sequenced clone |
spz | 2008-04-29 | Release 5.5 accounting |
spz | 2008-08-15 | Release 5.9 accounting |
spz | 2008-12-18 | 5.12 accounting |
CG6134 | 2011-03-01 | Transcript Validation |
1777 bp (1777 high quality bases) assembled on 2002-11-07
GenBank Submission: BT001898
> SD20537.complete CAGAGCCGAAAAGTTGAAGACTCACATATCCTGCGATCAGCTACTTGGAT AGCCCATTGCCCAGTTGCAAGCCAAATCGGTTATAAACGATATCAATATC GCGGCATTTCATCAGAGCAACCAAATCGAACCGATCCGAAAACGGTTCCA CTAAAGCGGCGAGAGCGAAACTAAAGTGAAAAGCAAACCGACTAATTGAA GTGTCTGTCTGTGTGTCTCGCAAACGTGCAAAGGAAACAAACAAAACGGA ATAGCCAACATATCACACAGAGCCACCGCACAAAATATTTATAAATAAAT AAGAGGCAACAGTAACACCAGCTACCAGTATAAAGGCCCGGCATTAACAT TTAGTCGTGCCAGTTTGTTTATTTTTTATATACGCAAAGCCCATAAAAAG AAAAAAACGCACAGATCACTAAAAAACAACAGCAGCCGGCGCTATAATAA CAAAGTTGTAGAAATAAGAAAATTGGTATAAGACGCCACCGATCCGCCAA TCACCTGCTATATACTATTACTAATCCCCGACGCAGACGTTCGCCGTCCG CAGAATCTATATATATTTATAAATCCAATTGATTAAGCCCGAGATCGAGC ATGATGACGCCCATGTGGATATCGCTGTTCAAAGTCCTGCTGCTGCTGTT CGCCTTCTTTGCCACGATAGTTTATATCAATATCGAATTAACGAAGCGAC ACGAGGCCGAGGTGAGGGCAGAGAAAACAGTGGCAGACTATAAGGCCCTT TTGGCTACCATTAACAATGGCGGACCCGGAAAGTCAGCATCTAATCACTT ACAGTACGAGGCCAAGGAGTATGAACGTATCATCAAAGAGCTTTTTACAA TAACCAATGATGAGGGAGTTGTCCTCTTTAATAGGACGGACACGGAGGTG CAATCCGAACAGCCGATACCCCCCCGACATCCATCGGATACCAAGTATCG GCCACCACAATCCCCAGCTCGTCCTTTGAGGAATGACACTAAGGAGCACA ATCCCTGCGCCAAGGATGAAAGCCAACACCTTAGAAACTTCTGCACGAAT GTGGACGACTATCCGGACCTTTCAGGCCTCACACATAAGCTAAAAAACAA CTTCGCCAAGTTCTTTAGCAACGATCTTCAGCCCACGGATGTGAGCTCTC GCGTTGGTGGCTCAGATGAGCGATTCCTTTGCAGGAGCATCAGGAAGCTG GTGTACCCAAAAAAGGGCTTGAGGGCGGACGACACCTGGCAGTTAATTGT CAATAACGATGAGTACAAACAGGCCATCCAGATCGAAGAGTGCGAAGGAG CGGATCAACCCTGTGACTTTGCCGCCAACTTTCCGCAGAGCTATAATCCA ATCTGCAAGCAGCACTACACACAGCAGACCCTGGCCAGCATCAAGAGTGA TGGCGAACTGGACGTGGTGCAGAATTCCTTCAAGATCCCCTCCTGCTGCA AGTGCGCGTTGAAGACTGGGTGATTCTGGAAAATGGGATTCTCCAGTCGA TGGCTGCGACAATGTGATATTGAGCAAGAAGTTTCACCCACCACAGAATG GCAGGCCAAACTGATCAGTGGTCATTGATTTATTCTATAATCTGCTGAAT CCACACATAGACTAATGTGCATATTAATTTAGAGCTTTAAGTCGAGTCAT TTTAACCATATTCGTGTCATATATTCATTTTTGGCTTCCACGTCTAATGC CTAAGCTAGAAATGCAAGTAATTAGTCCTAGAATACAAACAAAACAAAAC ACAAAACACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
spz-RK | 2207 | spz-RK | 355..2131 | 1..1777 | 8720 | 99.3 | Plus |
spz-RD | 1985 | spz-RD | 1149..1985 | 941..1777 | 4020 | 98.6 | Plus |
spz-RD | 1985 | spz-RD | 260..1063 | 1..804 | 4020 | 100 | Plus |
spz-RA | 2411 | spz-RA | 1501..2337 | 941..1777 | 4020 | 98.6 | Plus |
spz-RA | 2411 | spz-RA | 453..1118 | 1..666 | 3330 | 100 | Plus |
spz-RA | 2411 | spz-RA | 1118..1197 | 804..883 | 400 | 100 | Plus |
spz-RD | 1985 | spz-RD | 1064..1123 | 883..942 | 300 | 100 | Plus |
spz-RA | 2411 | spz-RA | 1416..1475 | 883..942 | 300 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 22892191..22892860 | 666..1 | 3225 | 99.1 | Minus |
chr3R | 27901430 | chr3R | 22889144..22889498 | 1295..941 | 1730 | 99.2 | Minus |
chr3R | 27901430 | chr3R | 22888133..22888369 | 1759..1523 | 1170 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 22888848..22889076 | 1524..1296 | 1130 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 22890403..22890541 | 804..666 | 695 | 100 | Minus |
chr3R | 27901430 | chr3R | 22890167..22890249 | 882..800 | 415 | 100 | Minus |
chr3R | 27901430 | chr3R | 22889646..22889710 | 947..883 | 295 | 96.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 27069144..27069809 | 666..1 | 3330 | 100 | Minus |
3R | 32079331 | 3R | 27066099..27066453 | 1295..941 | 1730 | 99.2 | Minus |
3R | 32079331 | 3R | 27065070..27065324 | 1777..1523 | 1200 | 98 | Minus |
3R | 32079331 | 3R | 27065803..27066031 | 1524..1296 | 1100 | 98.7 | Minus |
3R | 32079331 | 3R | 27067358..27067496 | 804..666 | 695 | 100 | Minus |
3R | 32079331 | 3R | 27067122..27067204 | 882..800 | 415 | 100 | Minus |
3R | 32079331 | 3R | 27066601..27066665 | 947..883 | 295 | 96.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 26809975..26810640 | 666..1 | 3330 | 100 | Minus |
3R | 31820162 | 3R | 26806930..26807284 | 1295..941 | 1730 | 99.1 | Minus |
3R | 31820162 | 3R | 26805901..26806155 | 1777..1523 | 1200 | 98 | Minus |
3R | 31820162 | 3R | 26806634..26806862 | 1524..1296 | 1100 | 98.6 | Minus |
3R | 31820162 | 3R | 26808189..26808327 | 804..666 | 695 | 100 | Minus |
3R | 31820162 | 3R | 26807953..26808035 | 882..800 | 415 | 100 | Minus |
3R | 31820162 | 3R | 26807432..26807496 | 947..883 | 295 | 96.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 614..677 | 222..285 | 121 | 69.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 22888158..22888367 | 1525..1734 | 98 | <- | Minus |
chr3R | 22888848..22889076 | 1296..1524 | 99 | <- | Minus |
chr3R | 22889144..22889498 | 941..1295 | 99 | <- | Minus |
chr3R | 22889653..22889710 | 883..940 | 100 | <- | Minus |
chr3R | 22890167..22890244 | 805..882 | 100 | <- | Minus |
chr3R | 22890403..22890540 | 667..804 | 100 | <- | Minus |
chr3R | 22892191..22892860 | 1..666 | 95 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz-RK | 1..873 | 601..1473 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz-RK | 1..873 | 601..1473 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz-RK | 1..873 | 601..1473 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz-RK | 1..873 | 601..1473 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz-RK | 1..873 | 601..1473 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz-RK | 260..1993 | 1..1734 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz-RK | 260..1993 | 1..1734 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz-RK | 262..1995 | 1..1734 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz-RK | 260..1993 | 1..1734 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz-RK | 262..1995 | 1..1734 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27065113..27065322 | 1525..1734 | 99 | <- | Minus |
3R | 27065803..27066031 | 1296..1524 | 98 | <- | Minus |
3R | 27066099..27066453 | 941..1295 | 99 | <- | Minus |
3R | 27066608..27066665 | 883..940 | 100 | <- | Minus |
3R | 27067122..27067199 | 805..882 | 100 | <- | Minus |
3R | 27067358..27067495 | 667..804 | 100 | <- | Minus |
3R | 27069144..27069809 | 1..666 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27065113..27065322 | 1525..1734 | 99 | <- | Minus |
3R | 27065803..27066031 | 1296..1524 | 98 | <- | Minus |
3R | 27066099..27066453 | 941..1295 | 99 | <- | Minus |
3R | 27066608..27066665 | 883..940 | 100 | <- | Minus |
3R | 27067122..27067199 | 805..882 | 100 | <- | Minus |
3R | 27067358..27067495 | 667..804 | 100 | <- | Minus |
3R | 27069144..27069809 | 1..666 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27065113..27065322 | 1525..1734 | 99 | <- | Minus |
3R | 27065803..27066031 | 1296..1524 | 98 | <- | Minus |
3R | 27066099..27066453 | 941..1295 | 99 | <- | Minus |
3R | 27066608..27066665 | 883..940 | 100 | <- | Minus |
3R | 27067122..27067199 | 805..882 | 100 | <- | Minus |
3R | 27067358..27067495 | 667..804 | 100 | <- | Minus |
3R | 27069144..27069809 | 1..666 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 22890835..22891044 | 1525..1734 | 99 | <- | Minus |
arm_3R | 22891525..22891753 | 1296..1524 | 98 | <- | Minus |
arm_3R | 22891821..22892175 | 941..1295 | 99 | <- | Minus |
arm_3R | 22892330..22892387 | 883..940 | 100 | <- | Minus |
arm_3R | 22892844..22892921 | 805..882 | 100 | <- | Minus |
arm_3R | 22893080..22893217 | 667..804 | 100 | <- | Minus |
arm_3R | 22894866..22895531 | 1..666 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26805944..26806153 | 1525..1734 | 99 | <- | Minus |
3R | 26806634..26806862 | 1296..1524 | 98 | <- | Minus |
3R | 26806930..26807284 | 941..1295 | 99 | <- | Minus |
3R | 26807439..26807496 | 883..940 | 100 | <- | Minus |
3R | 26807953..26808030 | 805..882 | 100 | <- | Minus |
3R | 26808189..26808326 | 667..804 | 100 | <- | Minus |
3R | 26809975..26810640 | 1..666 | 100 | Minus |
Translation from 600 to 1472
> SD20537.pep MMTPMWISLFKVLLLLFAFFATIVYINIELTKRHEAEVRAEKTVADYKAL LATINNGGPGKSASNHLQYEAKEYERIIKELFTITNDEGVVLFNRTDTEV QSEQPIPPRHPSDTKYRPPQSPARPLRNDTKEHNPCAKDESQHLRNFCTN VDDYPDLSGLTHKLKNNFAKFFSNDLQPTDVSSRVGGSDERFLCRSIRKL VYPKKGLRADDTWQLIVNNDEYKQAIQIEECEGADQPCDFAANFPQSYNP ICKQHYTQQTLASIKSDGELDVVQNSFKIPSCCKCALKTG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22956-PA | 363 | GF22956-PA | 1..360 | 1..288 | 577 | 38.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12145-PA | 351 | GG12145-PA | 1..350 | 1..289 | 1169 | 65.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18954-PA | 369 | GH18954-PA | 1..361 | 2..289 | 401 | 33.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
spz-PK | 290 | CG6134-PK | 1..290 | 1..290 | 1546 | 100 | Plus |
spz-PD | 273 | CG6134-PD | 1..273 | 1..290 | 1357 | 88.3 | Plus |
spz-PJ | 244 | CG6134-PJ | 1..244 | 1..290 | 1258 | 84.1 | Plus |
spz-PC | 253 | CG6134-PC | 1..253 | 1..290 | 1238 | 81.6 | Plus |
spz-PL | 270 | CG6134-PL | 1..270 | 1..290 | 1150 | 78.1 | Plus |
spz-PB | 300 | CG6134-PB | 1..300 | 1..290 | 1132 | 74.8 | Plus |
spz-PA | 326 | CG6134-PA | 1..326 | 1..290 | 1122 | 72.2 | Plus |
spz-PI | 227 | CG6134-PI | 23..227 | 95..290 | 1051 | 95.6 | Plus |
NT1-PD | 886 | CG42576-PD | 335..595 | 55..285 | 161 | 24 | Plus |
NT1-PH | 1042 | CG42576-PH | 335..595 | 55..285 | 161 | 24 | Plus |
NT1-PG | 1042 | CG42576-PG | 335..595 | 55..285 | 161 | 24 | Plus |
NT1-PF | 1042 | CG42576-PF | 335..595 | 55..285 | 161 | 24 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23281-PA | 359 | GI23281-PA | 180..351 | 112..289 | 405 | 47.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23619-PA | 403 | GL23619-PA | 192..402 | 91..289 | 517 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19380-PM | 283 | GA19380-PM | 1..282 | 2..289 | 582 | 45 | Plus |
Dpse\GA19380-PJ | 248 | GA19380-PJ | 1..247 | 2..289 | 570 | 41.3 | Plus |
Dpse\GA19380-PF | 262 | GA19380-PF | 1..261 | 2..289 | 558 | 45 | Plus |
Dpse\GA19380-PC | 255 | GA19380-PC | 1..254 | 2..289 | 553 | 40.1 | Plus |
Dpse\GA19380-PD | 305 | GA19380-PD | 1..304 | 2..289 | 543 | 39.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10138-PA | 316 | GM10138-PA | 1..316 | 2..290 | 1070 | 63.7 | Plus |
Dsec\GM13652-PA | 169 | GM13652-PA | 1..169 | 122..290 | 872 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\spz-PA | 350 | GD18098-PA | 1..350 | 2..290 | 1250 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24139-PA | 367 | GJ24139-PA | 186..359 | 112..289 | 406 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12039-PA | 389 | GK12039-PA | 231..382 | 108..288 | 332 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\spz-PA | 313 | GE10592-PA | 1..311 | 2..288 | 614 | 45.5 | Plus |
Translation from 600 to 1472
> SD20537.hyp MMTPMWISLFKVLLLLFAFFATIVYINIELTKRHEAEVRAEKTVADYKAL LATINNGGPGKSASNHLQYEAKEYERIIKELFTITNDEGVVLFNRTDTEV QSEQPIPPRHPSDTKYRPPQSPARPLRNDTKEHNPCAKDESQHLRNFCTN VDDYPDLSGLTHKLKNNFAKFFSNDLQPTDVSSRVGGSDERFLCRSIRKL VYPKKGLRADDTWQLIVNNDEYKQAIQIEECEGADQPCDFAANFPQSYNP ICKQHYTQQTLASIKSDGELDVVQNSFKIPSCCKCALKTG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
spz-PK | 290 | CG6134-PK | 1..290 | 1..290 | 1546 | 100 | Plus |
spz-PD | 273 | CG6134-PD | 1..273 | 1..290 | 1357 | 88.3 | Plus |
spz-PJ | 244 | CG6134-PJ | 1..244 | 1..290 | 1258 | 84.1 | Plus |
spz-PC | 253 | CG6134-PC | 1..253 | 1..290 | 1238 | 81.6 | Plus |
spz-PL | 270 | CG6134-PL | 1..270 | 1..290 | 1150 | 78.1 | Plus |