BDGP Sequence Production Resources |
Search the DGRC for SD20656
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 206 |
Well: | 56 |
Vector: | pOT2 |
Associated Gene/Transcript | CG34334-RA |
Protein status: | SD20656.pep: gold |
Sequenced Size: | 3257 |
Gene | Date | Evidence |
---|---|---|
CG34334 | 2008-04-29 | Release 5.5 accounting |
CG34334 | 2008-08-15 | Release 5.9 accounting |
CG34334 | 2008-12-18 | 5.12 accounting |
3257 bp (3257 high quality bases) assembled on 2006-08-24
GenBank Submission: BT028873
> SD20656.complete TTTTTTTTTTTTTTTTTTTTTATTTGGTTGATTTACGGATTTATTAACTG AAGTTGATGGATATTGGTTGCTGTACGCTATCGCTATGGTAGACTACTTG CCGGCCGCCGTGGCCAGGGGATTCCTTAGGACCAGGATGACAGAATCGCC TCGCAGGAACATCTTCGATATGAACCGATCCTTGTTCACGGGCTTCACCT TCTTCTTGCCCTTACCGGTCCGCGGCAGCTCCGTCCACATCTCCTTCACG TTTTCCAGTACCATGTTGCAGTGCCGATCGAAGGCCTTTACCCTGCCCAG CAGCTTCTTGTTGTTGCGGCAGTTGATGAGCACCTGGGTGTTGTTCTTCA CGGACTGCGTGAGCACGGACAGCGGGCCGGTGTTAAACTCCTCCTCCTCC TGCCGCGCCAGCTCCTCCGGGGTCAGCTCCGATTTCGGTTTCACAAGAGC CCTGCAGAGAACACAGTACATTAGTATTTCACCCACAACTCGAGCGTGGT GCTAACAATGCAAAATGCCGGCGCACATGCCGCTGCCAGTTACGCCATTT CCGATGGTTTGTCCCATCTGCCCCGGGATACTTACATAGCGGATTATAAC TATGGCTTGTTAAATGATGTTGATAGTCTTCTTGTTTCGCTTCTCAGTTG GTTTTCTGCGTTTATTGTTGGCAAAAGTATTCAGCGCGGCTTCGTTTTTT CTCGTGCCGAATTCGGCACGAGCCACAAAGCAAAAAAGTTGTTATCTATC ATTGAGTGGCCTTTGCTTGGTCAGCTTTTATTTTTATGACAGTTGTCAGA CCAAGTTTTTACACGCCATTACATTTTCATAAGGCAGCCGTTCCCAACGT TGAAAGTGAAATCTTGTGAAAATGACCAAGGTATCAGGGACGAAGGCAAA AGACGATGGCGAGCCAGCCACTAAGCGCGAACGCAAGGAGATGCATTCGC ACAAGAAAGATCGCAGGGAGCGATTGGAACGCATGGAGCGCATGGACCGC AGGGACCGCAGAGACCGCAGAGAACGCAGGGACCGCAAGGACCGCAAGGA CCGCAAGGACCGCAAAGAGCCAGCCAGAGGCCCCTCCTCCCGGATGAGGA ACATCTCACCAATTCACTCGAATGCTTCGGAGAGCACTGAAGCAGACTGC AGCGACTCCAGCTACTCGGACTCGAGCTACAGCACCTCTGGATCGTCCAG CTGCACAAGCTTTTTGAGCTCCACCAGCAGCAGCTACTCGTCGAGCGACA GCGAGCCAGAGCCAGAAGGATCCGTCAAAAAGTTTGAGCGCACCAAGCAC TCGTGTTGCCATTACCGACACCATCGTCGCCATAGGCGCCACCAAAACCC TCGTCATTCGCACCGTCGCCGGCACGTCACCCGTTGCCATCACTCGAATC ACGGACGCTTTTCCAAGCGTTTGGCTAAAAAGAGTCGTCGTGGCATATCC GCCGCCAAGGGAGCTATCACGGTTAAGGAGGAGGTTGTCGAAAAAATTTC TCCTGCTTCAGCCCCTGGGGTCATTCAGATACCGGCACCCATTCCGCTGC CCGTGCCGGCACCCATTCCGGCTGTCCTGTCTGTTTCGGAGGCACAACCG CGTTCCCACTCCCGTTCGCAATCGCACTCCCATCTCCATAGCCATTCCAG CTCCCATAACAATCCCCACCCGCAACCCGTTCCGGCCCCTGTTCCGGTAC CAATTCCTGCTCCGATCGCCATGCCAACTCCTATGAGGGAGCCAAGCAGC GTGGTATTGGACCGCAAGTCTCGTAGACGCAGCTCCACCTCGCAGAACAT CGCCTCGGCCGCCAGCAGTTCTATCGGCACCAACCAAGCCATCATCCAGT CTAGCACTATAACCATTACAAAGACGATTGCCAACGCCACTGGTATGGCC GAAACCAATTCAAGTGGCGGCGCTAGCATCTCCAGCACAAAAAATAAGGG GGACAGCAGTACCGGCCAATCTTCAAAGACGGTTGTCACCAATAACGCGG GCAGCAAGGCGGGTTACCAAGCCCCCAAGACTTCAGTGGCAAGCACATCT TCGAAAGCGGTGGTCAGGTCTAACGCAAGCGCCAGTTCAGGCCACGGGAA CCACACCAGTTCCAGCTCGAGTTTCACCCAGCTGCACTCCAGTGCCAGGC CCTCGACAGCCAAAGATCACGACAAGAGTCCTCAGCAGAACCGCTCAGGC AGCTCAGGCCCCAAGGGCAAGTCGTCGAAGATCAACGATCCTCCACGTCG TGGCTCTTCACCGTCTGCTGGTGCAGAACCTACTCGCCAAAAACAAAGCG TTCAAAATCAAAATGGGCGGAATTGCAGCAGCCAGTGGAACCATCGGCGC GGTGAAGGGGATGGAGAAGGAGCAGAAGCAAGTGGACGGGGCTACAGAGC CGTGGGTGAGGTAAACAAAGTGGCCTACAGAAACGGAAAGGACGCCTTCA AATTTCGCCAACCCGTGCGCAATGTTCGCCTGCACATTAAGGGATTGACG CGTCAGGTGACCAAGGAGCACATAACCGAGATATTTGGTCACTTCGGCGC CCTGACGGCAGTCGACTTTCCAATGGACCGTTTCCAAGGGCGCCAGGGAC GCGGATACGCCTTTGTGGAGTACTCACGTCCAGAGGACTGCGCCAGTGCC ATCAAGCATATGAACGGCGGGCAGATCGATGGGAAGCTGATCAGGGTGTC CGCCTTTCAGGAAAGCATGCTAAAGGCGCCGTGGCGTCAATACCGACGTT ACTCGCCAGTCAACCGGCGCCAGAGCCAGCGTACGTTGTCCCGCTCGGGC TCGTCGTCACGCTCTCGATCGCCGTCCCGCTCTGCGTCCGGCTCGGAATA CGGGTCGCGGTCCTCCCACTCTCGCGTCCGCTCTATGTCGGGATCGCGCT ATTCTCGGCGCAACCGTTCGCAATCGTGCTCCTACACTCGCTCATCGCCG CGCTACGGGCATTACCATCGCCCTAGACGCGATTCGCGTTCGCCCTAGAT AGGCGGACCTGTCTAATGTTGCAAAAGGAAGGCGAGATTAAGCCAGACAG GATTTTCAGGACTCTGCCAGATGCCTATTTTATTCCATTCCAACTTCAAA TACAAATGTAGACTTGATGGACATCGTGCGTTTTAAAAGTTACTTATTAA TACCAGTCTAATTTAAAAACATTGTTGGGCTTAAAATAAATAAAAATAAA AATCCATGCTCCGCACAAAAAAGAATTGTGAGGTATATCAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG34334-RA | 2556 | CG34334-RA | 184..2556 | 851..3223 | 11865 | 100 | Plus |
snRNP2-RA | 907 | snRNP2-RA | 268..699 | 451..20 | 2160 | 100 | Minus |
snRNP2.a | 614 | snRNP2.a | 268..503 | 451..216 | 1180 | 100 | Minus |
CG34334-RA | 2556 | CG34334-RA | 1..126 | 725..850 | 630 | 100 | Plus |
snRNP2-RA | 907 | snRNP2-RA | 153..268 | 700..585 | 580 | 100 | Minus |
snRNP2.a | 614 | snRNP2.a | 153..268 | 700..585 | 580 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 22268973..22271361 | 851..3239 | 11885 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 2170882..2171562 | 20..700 | 3405 | 100 | Plus |
chrX | 22417052 | chrX | 22268788..22268915 | 723..850 | 625 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 22858087..22860481 | 851..3245 | 11960 | 99.9 | Plus |
3R | 31820162 | 3R | 6086036..6086716 | 20..700 | 3405 | 100 | Plus |
X | 23527363 | X | 22857902..22858029 | 723..850 | 640 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmir\worf | 4174 | Dmir\worf WORF 4174bp Derived from AY144572. | 803..859 | 1676..1732 | 132 | 70.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 22269187..22271361 | 1065..3239 | 98 | Plus | |
chrX | 22268783..22268915 | 715..850 | 97 | -> | Plus |
chrX | 22268973..22269116 | 851..994 | 100 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34334-RA | 1..2127 | 872..2998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34334-RA | 1..2127 | 872..2998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34334-RA | 1..2127 | 872..2998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34334-RA | 1..2127 | 872..2998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34334-RA | 1..2127 | 872..2998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34334-RA | 1..126 | 725..850 | 100 | -> | Plus |
CG34334-RA | 184..2556 | 851..3223 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34334-RA | 1..126 | 725..850 | 100 | -> | Plus |
CG34334-RA | 184..2556 | 851..3223 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34334-RA | 1..126 | 725..850 | 100 | -> | Plus |
CG34334-RA | 184..2556 | 851..3223 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34334-RA | 184..2556 | 851..3223 | 100 | Plus | |
CG34334-RA | 1..126 | 725..850 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34334-RA | 1..126 | 725..850 | 100 | -> | Plus |
CG34334-RA | 184..2556 | 851..3223 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22872995..22875383 | 851..3239 | 100 | Plus | |
X | 22872805..22872937 | 715..850 | 97 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22872995..22875383 | 851..3239 | 100 | Plus | |
X | 22872805..22872937 | 715..850 | 97 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22872995..22875383 | 851..3239 | 100 | Plus | |
X | 22872805..22872937 | 715..850 | 97 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 22274641..22274773 | 715..850 | 97 | -> | Plus |
arm_X | 22274831..22277219 | 851..3239 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22857897..22858029 | 715..850 | 97 | -> | Plus |
X | 22858087..22860475 | 851..3239 | 100 | Plus |
Translation from 871 to 2997
> SD20656.pep MTKVSGTKAKDDGEPATKRERKEMHSHKKDRRERLERMERMDRRDRRDRR ERRDRKDRKDRKDRKEPARGPSSRMRNISPIHSNASESTEADCSDSSYSD SSYSTSGSSSCTSFLSSTSSSYSSSDSEPEPEGSVKKFERTKHSCCHYRH HRRHRRHQNPRHSHRRRHVTRCHHSNHGRFSKRLAKKSRRGISAAKGAIT VKEEVVEKISPASAPGVIQIPAPIPLPVPAPIPAVLSVSEAQPRSHSRSQ SHSHLHSHSSSHNNPHPQPVPAPVPVPIPAPIAMPTPMREPSSVVLDRKS RRRSSTSQNIASAASSSIGTNQAIIQSSTITITKTIANATGMAETNSSGG ASISSTKNKGDSSTGQSSKTVVTNNAGSKAGYQAPKTSVASTSSKAVVRS NASASSGHGNHTSSSSSFTQLHSSARPSTAKDHDKSPQQNRSGSSGPKGK SSKINDPPRRGSSPSAGAEPTRQKQSVQNQNGRNCSSQWNHRRGEGDGEG AEASGRGYRAVGEVNKVAYRNGKDAFKFRQPVRNVRLHIKGLTRQVTKEH ITEIFGHFGALTAVDFPMDRFQGRQGRGYAFVEYSRPEDCASAIKHMNGG QIDGKLIRVSAFQESMLKAPWRQYRRYSPVNRRQSQRTLSRSGSSSRSRS PSRSASGSEYGSRSSHSRVRSMSGSRYSRRNRSQSCSYTRSSPRYGHYHR PRRDSRSP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22015-PA | 2159 | GF22015-PA | 543..626 | 529..612 | 413 | 85.7 | Plus |
Dana\GF18475-PA | 386 | GF18475-PA | 234..309 | 535..610 | 245 | 57.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19755-PA | 749 | GG19755-PA | 1..749 | 1..708 | 1564 | 67.2 | Plus |
Dere\GG16863-PA | 377 | GG16863-PA | 221..296 | 535..610 | 261 | 59.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11866-PA | 508 | GH11866-PA | 415..505 | 533..622 | 288 | 56 | Plus |
Dgri\GH18277-PA | 397 | GH18277-PA | 246..341 | 535..633 | 262 | 51.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG34334-PA | 708 | CG34334-PA | 1..708 | 1..708 | 3668 | 100 | Plus |
RnpS1-PA | 374 | CG16788-PA | 1..374 | 342..679 | 365 | 30.6 | Plus |
Mur89F-PC | 2158 | CG4090-PC | 286..767 | 72..534 | 185 | 21.8 | Plus |
Mur89F-PB | 2159 | CG4090-PB | 286..767 | 72..534 | 185 | 21.8 | Plus |
SC35-PD | 195 | CG5442-PD | 23..176 | 535..696 | 155 | 32.5 | Plus |
SC35-PC | 195 | CG5442-PC | 23..176 | 535..696 | 155 | 32.5 | Plus |
SC35-PB | 195 | CG5442-PB | 23..176 | 535..696 | 155 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15652-PA | 520 | GI15652-PA | 413..511 | 532..628 | 306 | 56.4 | Plus |
Dmoj\GI24086-PA | 382 | GI24086-PA | 227..322 | 535..633 | 265 | 51.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22325-PA | 378 | GL22325-PA | 226..301 | 535..610 | 250 | 56.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25275-PA | 897 | GA25275-PA | 753..850 | 531..630 | 367 | 64 | Plus |
Dpse\GA14150-PA | 378 | GA14150-PA | 226..301 | 535..610 | 250 | 56.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10061-PA | 707 | GM10061-PA | 1..707 | 1..708 | 2151 | 86.8 | Plus |
Dsec\GM23813-PA | 375 | GM23813-PA | 217..294 | 533..610 | 275 | 60.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17555-PA | 631 | GD17555-PA | 140..631 | 216..708 | 1670 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19235-PA | 583 | GJ19235-PA | 476..580 | 532..633 | 358 | 62.6 | Plus |
Dvir\GJ10904-PA | 388 | GJ10904-PA | 235..330 | 535..633 | 265 | 51.5 | Plus |
Translation from 871 to 2997
> SD20656.hyp MTKVSGTKAKDDGEPATKRERKEMHSHKKDRRERLERMERMDRRDRRDRR ERRDRKDRKDRKDRKEPARGPSSRMRNISPIHSNASESTEADCSDSSYSD SSYSTSGSSSCTSFLSSTSSSYSSSDSEPEPEGSVKKFERTKHSCCHYRH HRRHRRHQNPRHSHRRRHVTRCHHSNHGRFSKRLAKKSRRGISAAKGAIT VKEEVVEKISPASAPGVIQIPAPIPLPVPAPIPAVLSVSEAQPRSHSRSQ SHSHLHSHSSSHNNPHPQPVPAPVPVPIPAPIAMPTPMREPSSVVLDRKS RRRSSTSQNIASAASSSIGTNQAIIQSSTITITKTIANATGMAETNSSGG ASISSTKNKGDSSTGQSSKTVVTNNAGSKAGYQAPKTSVASTSSKAVVRS NASASSGHGNHTSSSSSFTQLHSSARPSTAKDHDKSPQQNRSGSSGPKGK SSKINDPPRRGSSPSAGAEPTRQKQSVQNQNGRNCSSQWNHRRGEGDGEG AEASGRGYRAVGEVNKVAYRNGKDAFKFRQPVRNVRLHIKGLTRQVTKEH ITEIFGHFGALTAVDFPMDRFQGRQGRGYAFVEYSRPEDCASAIKHMNGG QIDGKLIRVSAFQESMLKAPWRQYRRYSPVNRRQSQRTLSRSGSSSRSRS PSRSASGSEYGSRSSHSRVRSMSGSRYSRRNRSQSCSYTRSSPRYGHYHR PRRDSRSP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG34334-PA | 708 | CG34334-PA | 1..708 | 1..708 | 3668 | 100 | Plus |
RnpS1-PA | 374 | CG16788-PA | 1..374 | 342..679 | 365 | 30.6 | Plus |
Mur89F-PC | 2158 | CG4090-PC | 286..767 | 72..534 | 185 | 21.8 | Plus |
Mur89F-PB | 2159 | CG4090-PB | 286..767 | 72..534 | 185 | 21.8 | Plus |
SC35-PD | 195 | CG5442-PD | 23..176 | 535..696 | 155 | 32.5 | Plus |