BDGP Sequence Production Resources |
Search the DGRC for SD20854
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 208 |
Well: | 54 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3706-RA |
Protein status: | SD20854.pep: gold |
Preliminary Size: | 1448 |
Sequenced Size: | 1762 |
Gene | Date | Evidence |
---|---|---|
CG3706 | 2002-01-01 | Sim4 clustering to Release 2 |
CG3706 | 2002-05-18 | Blastp of sequenced clone |
CG3706 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3706 | 2008-04-29 | Release 5.5 accounting |
CG3706 | 2008-08-15 | Release 5.9 accounting |
CG3706 | 2008-12-18 | 5.12 accounting |
1762 bp (1762 high quality bases) assembled on 2002-05-18
GenBank Submission: AY119247
> SD20854.complete CGCGAGCGCAGACAGATCCAGATTTAGCGAGCTAGTCATGCATCGCCGCA AAGCCCGTCGATTCCGACCCGATAAGCCCAGTCCGAGGAGGTGGGGCCGA AAAGTGGGTTTAGACGGTGGCGGCTTATCGAGTGGCGATAAGCGGGACAC AAGACCCACTTCCCCACACATTGTCCAGTGCAGGCCTCGCAGTCGCGTCC AATTGGCCAAGCCGTTCGGTAACGGAGCATTTTTGACGAGGATCGACATT CCGCGGAACTCCAAAGAGGATTTAATTTTGAACAGATTTTGAGCATCTTG GGACACAACATGATCGCAGCGCTCGGGCTGATCTTCGGCATTCTAACGGC CTTGGTGGTCGTGGCACTTAAGCTACTGGGCCTGAAGCCGCCACTAATCT TCGGCAAGTACCCACTGAAAGGCATCTTTTACCGGGTGAAGTTCTGGATC GCCCTGCTTGTCCTTCGCCGCCTGAGGTACCGCATCTACCGTCGGAACGA GGAGCTGCTCGGCTCCGAGGAGCACCTGGCCAAGGTCGACAGGCCGCAGC AGCTCAGCAACGACCCGAAGAGCTATGACGTGGTCAGCTTCATGGCGGCC AACAAGGAGGGCCAGAAACTAATGGTCACCTTGGAGCGAAGGAGGCGCGG AGTCCTCAAGGCGGCACTGTACCTGTGGCTTCCCGAAAGCGGCCTGTTCA GTTCGCCGAATCTGCCCGATATGGTATACTTCACCACCGCGGATGGAGCG GAGAGCAACGCGTTCCAGGGTGGAGGCTTCCACGTCTACCAGGAGGCATC TATGCGTGTGTGGCGGCTCAAGTACTCCGGACTGCTGAAAACTCAAGGGC CGGACGTGCAGGACGTAGCCGTGGACTTGGACCTCCGTTTCGAAAGCTCC TCCGCTGAGCACTTCGACTACAACAGAGATCTGAGCAGCGCCCTGATAGC CGACTCCATAGCCAGAGAGGCCTGGAACGAAAAGTTCTACAGCCTGCTGC GCAGCGTCAACCACATCGTAGAGAAGCGCACCCACTACGAACAGAACGGA GAACTGGCCGGCCAGGTCACGCTCGATGGCAAGGAGCTGGCGCTGAAAAT GGTGGGCTTCCGGGACCACAGCTTCGGCACCGAGCGCTGCCTAAGCTCCA TCAACCGGTACGTGTACTTTGCCCTCTTTATGGACGATGGCAGCAGCATG GTGGTGGGCAGCCTCAGTCAGCCGTCCTTCTTCCTGTCCTCCCTGAAGGT GGGCTACGTGTGCAGCCCCGAGCGGCAGTATCAGCCGCTGACCGGGAGCA ACTTCGAGCTGTACTCGTACGGCGAAAAGGGAACGCCGCCGCAGCACCAG AATTTCATTGTGCGCACCGAGGAGCGGGAGTACCTCGTGCAAATCCAGGT GGAGGCCTCCGCGCTGCGCTACGTCGGCGGCGACTGGGAGTCTAAGGTGT TCAACCAGTTTGTGGCCTGCACGGTCAACGGAGTTCCCGGCCAGGGCCAC GCCGAGTTCCTGTACCGCCACAAGGGCGGCAGGCCGGAGGATATATCGTC CGGGGACCCCGGCTGGTACCAGGACATCAAGCGCTTCGAGAGAAGCCTCT CGTTGCTGGAAGAGGAGGGCCAGGACGAAGACTTCATCTTCTAGGACGCC GACGAATTGTTTTTGTTTTCAGTTTAAGATAGCATGTAAAAGTATGGGGG AGACCCATCCTATCAAAATAAAGAGATTTTGTTTGAATGACAAAAAAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 824917..826657 | 1741..1 | 8690 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 930930..932671 | 1742..1 | 8710 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 939028..940769 | 1742..1 | 8710 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 824917..826657 | 1..1741 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3706-RA | 1..1335 | 310..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3706-RA | 1..1335 | 310..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3706-RA | 1..1335 | 310..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3706-RA | 1..1335 | 310..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3706-RA | 1..1335 | 310..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3706-RA | 1..1741 | 1..1741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3706-RA | 1..1741 | 1..1741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3706-RA | 1..1545 | 197..1741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3706-RA | 1..1741 | 1..1741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3706-RA | 1..1545 | 197..1741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 930931..932671 | 1..1741 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 930931..932671 | 1..1741 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 930931..932671 | 1..1741 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 824964..826704 | 1..1741 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 939029..940769 | 1..1741 | 100 | Minus |
Translation from 309 to 1643
> SD20854.pep MIAALGLIFGILTALVVVALKLLGLKPPLIFGKYPLKGIFYRVKFWIALL VLRRLRYRIYRRNEELLGSEEHLAKVDRPQQLSNDPKSYDVVSFMAANKE GQKLMVTLERRRRGVLKAALYLWLPESGLFSSPNLPDMVYFTTADGAESN AFQGGGFHVYQEASMRVWRLKYSGLLKTQGPDVQDVAVDLDLRFESSSAE HFDYNRDLSSALIADSIAREAWNEKFYSLLRSVNHIVEKRTHYEQNGELA GQVTLDGKELALKMVGFRDHSFGTERCLSSINRYVYFALFMDDGSSMVVG SLSQPSFFLSSLKVGYVCSPERQYQPLTGSNFELYSYGEKGTPPQHQNFI VRTEEREYLVQIQVEASALRYVGGDWESKVFNQFVACTVNGVPGQGHAEF LYRHKGGRPEDISSGDPGWYQDIKRFERSLSLLEEEGQDEDFIF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22050-PA | 445 | GF22050-PA | 3..445 | 1..444 | 1917 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12731-PA | 446 | GG12731-PA | 3..446 | 1..444 | 1993 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12415-PA | 147 | GH12415-PA | 1..147 | 297..444 | 610 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3706-PA | 444 | CG3706-PA | 1..444 | 1..444 | 2306 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15000-PA | 459 | GI15000-PA | 8..459 | 4..444 | 1540 | 65.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14211-PA | 443 | GL14211-PA | 3..443 | 1..444 | 1795 | 75.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17628-PA | 443 | GA17628-PA | 3..443 | 1..444 | 1796 | 75.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19011-PA | 446 | GM19011-PA | 3..446 | 1..444 | 2076 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15358-PA | 446 | GJ15358-PA | 24..446 | 26..444 | 1636 | 72.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10173-PA | 444 | GK10173-PA | 3..444 | 1..444 | 1613 | 72.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16557-PA | 448 | GE16557-PA | 3..448 | 1..444 | 1972 | 89.9 | Plus |
Translation from 309 to 1643
> SD20854.hyp MIAALGLIFGILTALVVVALKLLGLKPPLIFGKYPLKGIFYRVKFWIALL VLRRLRYRIYRRNEELLGSEEHLAKVDRPQQLSNDPKSYDVVSFMAANKE GQKLMVTLERRRRGVLKAALYLWLPESGLFSSPNLPDMVYFTTADGAESN AFQGGGFHVYQEASMRVWRLKYSGLLKTQGPDVQDVAVDLDLRFESSSAE HFDYNRDLSSALIADSIAREAWNEKFYSLLRSVNHIVEKRTHYEQNGELA GQVTLDGKELALKMVGFRDHSFGTERCLSSINRYVYFALFMDDGSSMVVG SLSQPSFFLSSLKVGYVCSPERQYQPLTGSNFELYSYGEKGTPPQHQNFI VRTEEREYLVQIQVEASALRYVGGDWESKVFNQFVACTVNGVPGQGHAEF LYRHKGGRPEDISSGDPGWYQDIKRFERSLSLLEEEGQDEDFIF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3706-PA | 444 | CG3706-PA | 1..444 | 1..444 | 2306 | 100 | Plus |