![]() | BDGP Sequence Production Resources |
Search the DGRC for SD20918
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 209 |
Well: | 18 |
Vector: | pOT2 |
Associated Gene/Transcript | MED18-RA |
Protein status: | SD20918.pep: gold |
Sequenced Size: | 843 |
Gene | Date | Evidence |
---|---|---|
MED-18-RA | 2009-01-15 | Manual selection by Sue Celniker |
843 bp assembled on 2009-03-10
GenBank Submission: BT071807.1
> SD20918.complete ATGAAACTAAAAACAAAACCAAACTACTGCTCAGTTAATTTAATACCATA GTACACCCAAACTTACAAAATTAGCCAATGGCGATTGTGTCGTCGGCCCG TGAGTCGCTCTCCCATGCGATGAACAACCGCTTCTTGCCCAACCTGGAGT ACTTGCTGCAGGGATCTATCCTGGATTCCGCCGTGGAACACTTGATGCAC AGACTAAAGGGACTCTGCGACAATGTGGACACCTCGCCGGAGCCGTTTCA CGATCTGGAAGTGTGTATGAGCCTTCGCCAGCCCAATGCCAACCAGCCGC TGCTTCTTCGCGTGCGCCGAGCCCTTGGTCGCGATGCACCCTTTCAGATG CGCTACCTAGGAAACCCCGAGGTGGATCTGCGCCGGCCTACATTGGTACG CAGCTGCATGGACTGCGCCTGCACCAATGGCATTTTGGAATTCCTCACGG AAATGGGCTTCCGCCTGGAGTTCGAGTACATAGCAAAGGGCTATATGTTC CGCAAGGGGCGCATGAAGATTACCGTCTCCAAGCTCATTAAGATTGTGCC CGGCAAGCAGCAGGACATGGCCAACGAGCCAATCTCACAAAGCTACATAG TGGAACTCTCTGTGGTGGCGCCAACGGGGCAGGAGAATGTCGGCGAGGAA ATGCGCGTGTTTGCCGAGCAACTAAAGCCACTCGTGCAGCTCGAGAAGAT CGACTACAAGCGACTGGGCGGCATGCCGTAGTTTACAATAAAAGTGCACA TCGCATTTATCCAACAGTTATTTAATTTCTTAAATGTAAGAAAATATACA AATTTACAGAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MED18-RC | 865 | MED18-RC | 251..865 | 200..814 | 3075 | 100 | Plus |
MED18.b | 865 | MED18.b | 251..865 | 200..814 | 3075 | 100 | Plus |
MED18.a | 928 | MED18.a | 48..537 | 1..490 | 2450 | 100 | Plus |
MED18.a | 928 | MED18.a | 603..928 | 489..814 | 1630 | 100 | Plus |
MED18-RC | 865 | MED18-RC | 29..235 | 1..207 | 1020 | 99.5 | Plus |
MED18.b | 865 | MED18.b | 29..235 | 1..207 | 1020 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1760405..1760730 | 489..814 | 1630 | 100 | Plus |
chrX | 22417052 | chrX | 1760049..1760339 | 200..490 | 1455 | 100 | Plus |
chrX | 22417052 | chrX | 1759780..1759981 | 1..202 | 1010 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
412 | 7567 | 412 412 7567bp | 2351..2412 | 309..248 | 112 | 64.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1759780..1759981 | 1..202 | 100 | -> | Plus |
chrX | 1760052..1760338 | 203..489 | 100 | -> | Plus |
chrX | 1760406..1760730 | 490..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED18-RA | 1..654 | 78..731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED18-RA | 1..654 | 78..731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED18-RA | 1..654 | 78..731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED18-RA | 1..654 | 78..731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED18-RA | 29..839 | 1..811 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED18-RA | 29..842 | 1..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED18-RA | 29..842 | 1..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED18-RA | 29..842 | 1..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1865937..1866138 | 1..202 | 100 | -> | Plus |
X | 1866209..1866495 | 203..489 | 100 | -> | Plus |
X | 1866563..1866887 | 490..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1865937..1866138 | 1..202 | 100 | -> | Plus |
X | 1866209..1866495 | 203..489 | 100 | -> | Plus |
X | 1866563..1866887 | 490..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1865937..1866138 | 1..202 | 100 | -> | Plus |
X | 1866209..1866495 | 203..489 | 100 | -> | Plus |
X | 1866563..1866887 | 490..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1759970..1760171 | 1..202 | 100 | -> | Plus |
arm_X | 1760242..1760528 | 203..489 | 100 | -> | Plus |
arm_X | 1760596..1760920 | 490..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1874035..1874236 | 1..202 | 100 | -> | Plus |
X | 1874307..1874593 | 203..489 | 100 | -> | Plus |
X | 1874661..1874985 | 490..814 | 100 | Plus |
Translation from 77 to 730
> SD20918.pep MAIVSSARESLSHAMNNRFLPNLEYLLQGSILDSAVEHLMHRLKGLCDNV DTSPEPFHDLEVCMSLRQPNANQPLLLRVRRALGRDAPFQMRYLGNPEVD LRRPTLVRSCMDCACTNGILEFLTEMGFRLEFEYIAKGYMFRKGRMKITV SKLIKIVPGKQQDMANEPISQSYIVELSVVAPTGQENVGEEMRVFAEQLK PLVQLEKIDYKRLGGMP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21201-PA | 217 | GF21201-PA | 1..217 | 1..217 | 1093 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12884-PA | 217 | GG12884-PA | 1..217 | 1..217 | 1146 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24653-PA | 216 | GH24653-PA | 3..216 | 4..217 | 1069 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MED18-PA | 217 | CG14802-PA | 1..217 | 1..217 | 1118 | 100 | Plus |
MED18-PC | 50 | CG14802-PC | 1..43 | 1..43 | 206 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11081-PA | 217 | GI11081-PA | 3..217 | 4..217 | 1036 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20340-PA | 217 | GL20340-PA | 1..217 | 1..217 | 1112 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13258-PA | 217 | GA13258-PA | 1..217 | 1..217 | 1109 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19171-PA | 217 | GM19171-PA | 1..217 | 1..217 | 1146 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16392-PA | 216 | GJ16392-PA | 3..216 | 4..217 | 1063 | 92.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10069-PA | 219 | GK10069-PA | 3..219 | 1..217 | 1080 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16712-PA | 217 | GE16712-PA | 1..217 | 1..217 | 1146 | 99.5 | Plus |
Translation from 77 to 730
> SD20918.hyp MAIVSSARESLSHAMNNRFLPNLEYLLQGSILDSAVEHLMHRLKGLCDNV DTSPEPFHDLEVCMSLRQPNANQPLLLRVRRALGRDAPFQMRYLGNPEVD LRRPTLVRSCMDCACTNGILEFLTEMGFRLEFEYIAKGYMFRKGRMKITV SKLIKIVPGKQQDMANEPISQSYIVELSVVAPTGQENVGEEMRVFAEQLK PLVQLEKIDYKRLGGMP*