BDGP Sequence Production Resources |
Search the DGRC for SD21168
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 211 |
Well: | 68 |
Vector: | pOT2 |
Associated Gene/Transcript | CG18278-RA |
Protein status: | SD21168.pep: gold |
Preliminary Size: | 1743 |
Sequenced Size: | 1779 |
Gene | Date | Evidence |
---|---|---|
CG18278 | 2003-01-01 | Sim4 clustering to Release 3 |
CG18278 | 2005-01-26 | Blastp of sequenced clone |
CG18278 | 2008-04-29 | Release 5.5 accounting |
CG18278 | 2008-08-15 | Release 5.9 accounting |
CG18278 | 2008-12-18 | 5.12 accounting |
1779 bp (1779 high quality bases) assembled on 2005-01-26
GenBank Submission: BT021205
> SD21168.complete TAGAGTTTGTCCTATTTCGGTTGGCCATTGGCTAACACTAAAAGATCGCC GCTGCCTTTTACAACACTGCACTTGCAAGCCGGGCTTTGTTATCGCACAA ATTTTATGTAAACAAAAGAAAACTTCGATCTGCTCCATGATCAGCTTAGC CCCCCTGATCATCCTAGTCCTCGCTTGCCTGGGAAACACGGCCAGCGAGA AGTTGCCCAACATTCTGCTGATCCTGTCCGACGATCAGGATGTGGAGCTG CGCGGTATGTTTCCCATGGAGCATACGATCGAAATGCTGGGTTTCGGTGG CGCCCTGTTCCACAACGCCTACACGCCCTCGCCCATCTGCTGTCCGGCGA GGACGAGTCTGCTGACGGGCATGTATGCGCACAATCACGGCACCCGGAAC AATTCCGTAAGTGGTGGATGCTACGGACCACACTGGCGGCGAGCGCTGGA GCCCCGGGCCTTGCCATACATCTTGCAGCAGCACGGATACAACACCTTCT TTGGCGGGAAGTACTTGAATCAGTACTGGGGTGCTGGGGATGTGCCAAAG GGTTGGAACCACTTCTATGGCCTTCACGGGAACTCTAGATACTATAACTA CACACTGCGCGAAAATAGCGGCAACGTGCACTACGAGTCCACCTACCTAA CCGATCTGCTAAGAGATCGCGCCGCTGACTTTCTAAGAAATGCTACACAA TCCTCGGAACCGTTCTTCGCGATGGTCGCCCCACCGGCAGCCCATGAACC CTTCACTCCGGCACCAAGACATGAGGGTGTGTTCTCCCATATCGAAGCCC TGCGCACACCCAGCTTCAATCAAGTTAAGCAGGATAAGCACTGGTTGGTG CGAGCAGCACGTCGTCTGCCCAACGAAACCATCAACACCATAGACACGTA TTTCCAGAAACGCTGGGAAACGCTGCTGGCCGTGGACGAACTGGTCGTCA CCTTGATGGGAGTGCTAAACGATACGCAATCGTTGGAGAACACCTACATT ATCTACACCTCGGATAACGGCTACCATGTGGGGCAGTTTGCACAGCCCTT CGATAAGAGACAGCCCTACGAAACGGATATTAACGTACCGCTGCTAATCC GGGGACCTGGAATAGCACCTGAGAGCCACATTGACACTGCCGTCAGTCTA GTGGACTTGGCACCGACTATATTGGCCTGGGCCGACATCGACACACCATC CTACATGGATGGGCAATCATTTCACGAGCTTTTGCTCAACAAAAGGCGAA GGGTTCCATTTTTCGAGCGTTCCCTGTTGATCGAGTACTGGGGCGAGGGA ACTCTGGCCACCTTTAATCCTGAATGCCCTTGGCCAGAAAAGGATCGATT GGCGCAGTGCACCCCCGCAGCGGATTGCCATTGCCAGGATGCATGGAACA ACACCTACGCCTGCTTAAGAAATATTCGCCATCGCGAGGATCGCATTTAC TGCGAATTTCGGGATAACGAGAACTTTTTGGAGGCATATGACCTGCAACT GGATCCCTTTCAAATGACCAACATTGCCTACGATCTGCTGCCCATTGAAC GAGCTTTGTATTCGTTGCGTCTCAAGAATCTCACACAGTGTTCGGGCCAC TCGTGTTTTGTATAGATATATGCATATTACTCCTAGCCAAATAGTAATCC AAAACCAAATTCAAGTCCGCTGGGCGCATATAGATTTCATATTCAGATAT CATGTGATTTATGTTGCTATATACATAGTCTCATATTAATCGTAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 9296410..9297109 | 838..139 | 3485 | 99.9 | Minus |
chr2R | 21145070 | chr2R | 9301137..9301836 | 838..139 | 3275 | 97.9 | Minus |
chr2R | 21145070 | chr2R | 9295720..9296358 | 1471..833 | 3195 | 100 | Minus |
chr2R | 21145070 | chr2R | 9300447..9301085 | 1471..833 | 3195 | 100 | Minus |
chr2R | 21145070 | chr2R | 9295389..9295662 | 1743..1470 | 1370 | 100 | Minus |
chr2R | 21145070 | chr2R | 9300116..9300389 | 1743..1470 | 1370 | 100 | Minus |
chr2R | 21145070 | chr2R | 9297162..9297300 | 139..1 | 695 | 100 | Minus |
chr2R | 21145070 | chr2R | 9301889..9302026 | 139..1 | 615 | 97.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 13409063..13409762 | 838..139 | 3485 | 99.9 | Minus |
2R | 25286936 | 2R | 13413790..13414489 | 838..139 | 3275 | 97.9 | Minus |
2R | 25286936 | 2R | 13408373..13409011 | 1471..833 | 3195 | 100 | Minus |
2R | 25286936 | 2R | 13413100..13413738 | 1471..833 | 3195 | 100 | Minus |
2R | 25286936 | 2R | 13408041..13408315 | 1744..1470 | 1375 | 100 | Minus |
2R | 25286936 | 2R | 13412768..13413042 | 1744..1470 | 1375 | 100 | Minus |
2R | 25286936 | 2R | 13409815..13409953 | 139..1 | 695 | 100 | Minus |
2R | 25286936 | 2R | 13414542..13414679 | 139..1 | 615 | 97.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 13410262..13410961 | 838..139 | 3485 | 99.8 | Minus |
2R | 25260384 | 2R | 13414989..13415688 | 838..139 | 3275 | 97.8 | Minus |
2R | 25260384 | 2R | 13414299..13414937 | 1471..833 | 3195 | 100 | Minus |
2R | 25260384 | 2R | 13409572..13410210 | 1471..833 | 3195 | 100 | Minus |
2R | 25260384 | 2R | 13413967..13414241 | 1744..1470 | 1375 | 100 | Minus |
2R | 25260384 | 2R | 13409240..13409514 | 1744..1470 | 1375 | 100 | Minus |
2R | 25260384 | 2R | 13411014..13411152 | 139..1 | 695 | 100 | Minus |
2R | 25260384 | 2R | 13415741..13415878 | 139..1 | 625 | 97.8 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 9295389..9295660 | 1472..1743 | 100 | <- | Minus |
chr2R | 9295720..9296357 | 834..1471 | 100 | <- | Minus |
chr2R | 9296415..9297108 | 140..833 | 100 | <- | Minus |
chr2R | 9297162..9297300 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18278-RA | 1..1479 | 137..1615 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18278-RA | 1..1479 | 137..1615 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18278-RA | 1..1479 | 137..1615 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18278-RA | 1..1479 | 137..1615 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18278-RA | 1..1479 | 137..1615 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18278-RA | 1..1743 | 1..1743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18278-RA | 1..1743 | 1..1743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18278-RA | 1..1677 | 67..1743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18278-RA | 1..1743 | 1..1743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18278-RA | 1..1677 | 67..1743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13408042..13408313 | 1472..1743 | 100 | <- | Minus |
2R | 13408373..13409010 | 834..1471 | 100 | <- | Minus |
2R | 13409068..13409761 | 140..833 | 100 | <- | Minus |
2R | 13409815..13409953 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13408042..13408313 | 1472..1743 | 100 | <- | Minus |
2R | 13408373..13409010 | 834..1471 | 100 | <- | Minus |
2R | 13409068..13409761 | 140..833 | 100 | <- | Minus |
2R | 13409815..13409953 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13408042..13408313 | 1472..1743 | 100 | <- | Minus |
2R | 13408373..13409010 | 834..1471 | 100 | <- | Minus |
2R | 13409068..13409761 | 140..833 | 100 | <- | Minus |
2R | 13409815..13409953 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 9295547..9295818 | 1472..1743 | 100 | <- | Minus |
arm_2R | 9295878..9296515 | 834..1471 | 100 | <- | Minus |
arm_2R | 9296573..9297266 | 140..833 | 100 | <- | Minus |
arm_2R | 9297320..9297458 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13409241..13409512 | 1472..1743 | 100 | <- | Minus |
2R | 13409572..13410209 | 834..1471 | 100 | <- | Minus |
2R | 13410267..13410960 | 140..833 | 100 | <- | Minus |
2R | 13411014..13411152 | 1..139 | 100 | Minus |
Translation from 0 to 1614
> SD21168.hyp RVCPISVGHWLTLKDRRCLLQHCTCKPGFVIAQILCKQKKTSICSMISLA PLIILVLACLGNTASEKLPNILLILSDDQDVELRGMFPMEHTIEMLGFGG ALFHNAYTPSPICCPARTSLLTGMYAHNHGTRNNSVSGGCYGPHWRRALE PRALPYILQQHGYNTFFGGKYLNQYWGAGDVPKGWNHFYGLHGNSRYYNY TLRENSGNVHYESTYLTDLLRDRAADFLRNATQSSEPFFAMVAPPAAHEP FTPAPRHEGVFSHIEALRTPSFNQVKQDKHWLVRAARRLPNETINTIDTY FQKRWETLLAVDELVVTLMGVLNDTQSLENTYIIYTSDNGYHVGQFAQPF DKRQPYETDINVPLLIRGPGIAPESHIDTAVSLVDLAPTILAWADIDTPS YMDGQSFHELLLNKRRRVPFFERSLLIEYWGEGTLATFNPECPWPEKDRL AQCTPAADCHCQDAWNNTYACLRNIRHREDRIYCEFRDNENFLEAYDLQL DPFQMTNIAYDLLPIERALYSLRLKNLTQCSGHSCFV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18278-PA | 492 | CG18278-PA | 1..492 | 46..537 | 2683 | 100 | Plus |
CG30059-PA | 492 | CG30059-PA | 1..492 | 46..537 | 2665 | 99 | Plus |
Sulf1-PC | 1114 | CG6725-PC | 47..407 | 62..418 | 689 | 40.9 | Plus |
Sulf1-PB | 1114 | CG6725-PB | 47..407 | 62..418 | 689 | 40.9 | Plus |
Sulf1-PA | 1114 | CG6725-PA | 47..407 | 62..418 | 689 | 40.9 | Plus |
Translation from 136 to 1614
> SD21168.pep MISLAPLIILVLACLGNTASEKLPNILLILSDDQDVELRGMFPMEHTIEM LGFGGALFHNAYTPSPICCPARTSLLTGMYAHNHGTRNNSVSGGCYGPHW RRALEPRALPYILQQHGYNTFFGGKYLNQYWGAGDVPKGWNHFYGLHGNS RYYNYTLRENSGNVHYESTYLTDLLRDRAADFLRNATQSSEPFFAMVAPP AAHEPFTPAPRHEGVFSHIEALRTPSFNQVKQDKHWLVRAARRLPNETIN TIDTYFQKRWETLLAVDELVVTLMGVLNDTQSLENTYIIYTSDNGYHVGQ FAQPFDKRQPYETDINVPLLIRGPGIAPESHIDTAVSLVDLAPTILAWAD IDTPSYMDGQSFHELLLNKRRRVPFFERSLLIEYWGEGTLATFNPECPWP EKDRLAQCTPAADCHCQDAWNNTYACLRNIRHREDRIYCEFRDNENFLEA YDLQLDPFQMTNIAYDLLPIERALYSLRLKNLTQCSGHSCFV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11188-PA | 501 | GF11188-PA | 8..501 | 4..492 | 1824 | 67.6 | Plus |
Dana\GF16526-PA | 1145 | GF16526-PA | 52..431 | 17..391 | 670 | 40.2 | Plus |
Dana\GF13402-PA | 541 | GF13402-PA | 1..376 | 1..392 | 211 | 24.9 | Plus |
Dana\GF25237-PA | 570 | GF25237-PA | 1..357 | 1..352 | 204 | 25.7 | Plus |
Dana\GF16526-PA | 1145 | GF16526-PA | 965..1041 | 414..492 | 162 | 43 | Plus |
Dana\GF24576-PA | 583 | GF24576-PA | 22..236 | 10..204 | 155 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22495-PA | 492 | GG22495-PA | 1..492 | 1..492 | 2555 | 94.3 | Plus |
Dere\GG20070-PA | 1115 | GG20070-PA | 47..427 | 16..391 | 677 | 40.1 | Plus |
Dere\GG20328-PA | 478 | GG20328-PA | 6..375 | 7..392 | 202 | 23.9 | Plus |
Dere\GG15780-PA | 565 | GG15780-PA | 21..363 | 18..359 | 192 | 25.6 | Plus |
Dere\GG19815-PA | 565 | GG19815-PA | 21..363 | 18..359 | 190 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12546-PA | 501 | GH12546-PA | 15..501 | 7..492 | 1608 | 60 | Plus |
Dgri\GH18078-PA | 1191 | GH18078-PA | 74..453 | 17..391 | 671 | 40.5 | Plus |
Dgri\GH14468-PA | 619 | GH14468-PA | 29..369 | 20..359 | 217 | 26.7 | Plus |
Dgri\GH22700-PA | 542 | GH22700-PA | 19..360 | 6..367 | 208 | 25.1 | Plus |
Dgri\GH18737-PA | 526 | GH18737-PA | 21..351 | 21..366 | 189 | 26.1 | Plus |
Dgri\GH18078-PA | 1191 | GH18078-PA | 1013..1089 | 414..492 | 158 | 41.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18278-PA | 492 | CG18278-PA | 1..492 | 1..492 | 2683 | 100 | Plus |
CG30059-PA | 492 | CG30059-PA | 1..492 | 1..492 | 2665 | 99 | Plus |
Sulf1-PC | 1114 | CG6725-PC | 47..407 | 17..373 | 689 | 40.9 | Plus |
Sulf1-PB | 1114 | CG6725-PB | 47..407 | 17..373 | 689 | 40.9 | Plus |
Sulf1-PA | 1114 | CG6725-PA | 47..407 | 17..373 | 689 | 40.9 | Plus |
CG8646-PB | 562 | CG8646-PB | 6..394 | 7..391 | 216 | 24.3 | Plus |
CG32191-PC | 564 | CG32191-PC | 8..357 | 10..355 | 206 | 25.7 | Plus |
CG32191-PB | 564 | CG32191-PB | 8..357 | 10..355 | 206 | 25.7 | Plus |
CG7408-PD | 585 | CG7408-PD | 15..297 | 4..295 | 173 | 23.8 | Plus |
CG7408-PC | 585 | CG7408-PC | 15..297 | 4..295 | 173 | 23.8 | Plus |
CG7408-PB | 585 | CG7408-PB | 15..297 | 4..295 | 173 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14019-PA | 493 | GI14019-PA | 3..491 | 7..492 | 1652 | 61.7 | Plus |
Dmoj\GI24652-PA | 1155 | GI24652-PA | 61..436 | 16..386 | 681 | 40.6 | Plus |
Dmoj\GI13615-PA | 576 | GI13615-PA | 33..367 | 22..357 | 217 | 25.5 | Plus |
Dmoj\GI18487-PA | 528 | GI18487-PA | 21..314 | 24..348 | 185 | 24.6 | Plus |
Dmoj\GI24623-PA | 528 | GI24623-PA | 27..353 | 25..366 | 170 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10403-PA | 499 | GL10403-PA | 5..499 | 1..492 | 1821 | 69.4 | Plus |
Dper\GL22250-PA | 1173 | GL22250-PA | 61..440 | 17..391 | 674 | 40.5 | Plus |
Dper\GL22750-PA | 575 | GL22750-PA | 37..370 | 24..358 | 201 | 26.6 | Plus |
Dper\GL11077-PA | 545 | GL11077-PA | 26..356 | 24..368 | 197 | 24.9 | Plus |
Dper\GL22855-PA | 559 | GL22855-PA | 15..335 | 11..355 | 162 | 23.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24970-PB | 499 | GA24970-PB | 5..499 | 1..492 | 1829 | 69.6 | Plus |
Dpse\GA19814-PA | 1160 | GA19814-PA | 60..439 | 17..391 | 674 | 40.5 | Plus |
Dpse\GA16747-PA | 575 | GA16747-PA | 37..370 | 24..358 | 207 | 26.5 | Plus |
Dpse\GA21235-PA | 545 | GA21235-PA | 26..356 | 24..368 | 197 | 24.9 | Plus |
Dpse\GA12883-PA | 526 | GA12883-PA | 5..338 | 4..355 | 194 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20282-PA | 492 | GM20282-PA | 1..492 | 1..492 | 2619 | 97.4 | Plus |
Dsec\GM15446-PA | 1114 | GM15446-PA | 47..426 | 17..391 | 678 | 40.5 | Plus |
Dsec\GM18674-PA | 524 | GM18674-PA | 7..335 | 8..355 | 160 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25763-PA | 1772 | GD25763-PA | 1..405 | 41..445 | 2269 | 97.3 | Plus |
Dsim\GD20299-PA | 1114 | GD20299-PA | 47..426 | 17..391 | 679 | 40.5 | Plus |
Dsim\GD10911-PA | 633 | GD10911-PA | 6..375 | 7..392 | 210 | 23.6 | Plus |
Dsim\GD12374-PA | 554 | GD12374-PA | 20..363 | 17..359 | 199 | 24.2 | Plus |
Dsim\GD20144-PA | 439 | GD20144-PA | 7..335 | 8..355 | 169 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19791-PA | 500 | GJ19791-PA | 1..498 | 1..490 | 1715 | 63.5 | Plus |
Dvir\GJ23505-PA | 1135 | GJ23505-PA | 61..441 | 16..391 | 670 | 40.3 | Plus |
Dvir\GJ13952-PA | 574 | GJ13952-PA | 33..367 | 22..357 | 214 | 25.2 | Plus |
Dvir\GJ21349-PA | 531 | GJ21349-PA | 21..322 | 24..346 | 203 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10744-PA | 505 | GK10744-PA | 33..503 | 23..490 | 1715 | 66.5 | Plus |
Dwil\GK13512-PA | 1148 | GK13512-PA | 50..430 | 16..391 | 675 | 40.4 | Plus |
Dwil\GK13512-PA | 1148 | GK13512-PA | 965..1041 | 414..492 | 154 | 41.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13365-PA | 492 | GE13365-PA | 1..492 | 1..492 | 2553 | 94.7 | Plus |
Dyak\GE26324-PA | 1108 | GE26324-PA | 46..426 | 16..391 | 680 | 40.4 | Plus |
Dyak\GE12487-PA | 544 | GE12487-PA | 6..375 | 7..392 | 203 | 24.4 | Plus |
Dyak\GE22117-PA | 565 | GE22117-PA | 21..363 | 18..359 | 195 | 25 | Plus |
Dyak\GE19935-PA | 577 | GE19935-PA | 10..390 | 7..386 | 176 | 23.2 | Plus |