BDGP Sequence Production Resources |
Search the DGRC for SD21550
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 215 |
Well: | 50 |
Vector: | pOT2 |
Associated Gene/Transcript | CG13204-RB |
Protein status: | SD21550.pep: gold |
Preliminary Size: | 2070 |
Sequenced Size: | 1815 |
Gene | Date | Evidence |
---|---|---|
CG13204 | 2004-01-13 | Blastp of sequenced clone |
CG13204 | 2008-04-29 | Release 5.5 accounting |
CG13204 | 2008-08-15 | Release 5.9 accounting |
CG13204 | 2008-12-18 | 5.12 accounting |
1815 bp (1815 high quality bases) assembled on 2004-01-13
GenBank Submission: BT011330
> SD21550.complete AAAAAATTAAAAGAATATTTAAATCTGTGTTGAAATATGCTTTTGGTAGC TGACAACGTATTGAGCCGCATCCTTAAAAATTAGCAGTCCTGATAATAGA ATCAGCGATAAGTTTAGGCCTCGAAACGGAAATGGAAAAATCTAAGGGAC AGTTATACAAAGTATCTTCGCTCGTTTCGCGTAGGCACAAAGACATCCAA GAAGTACCAGTACTGGGCCCATGCAGATCACATGGATTTCCTAAAGCCCT TCCAGGGACCGGGCAGGAACTCCGCGAATGGCAATGGAAAATCCAACGAC GAGGACGACACAGAGTGTGATTTTGGCTACCAAGTTTTGGCCAAGGCGGC CAGCAATGGAGGCGAGGATGAGCTGAAGATAACCATTGCCACTGCATCGG CTGGTTGCTCATCCATGGGGACGCACACGGTTAATACCTATACTACCGCT TTAAGCAGTACTTCGGCGTCCGGCATAACATCAAGTTTGGGCGCGACCAC GCCCCCGAATATGATCTCTCCAGGCAGCAATTTGGGCGGAACAGGAGGAG GTTCTGGGTCCGTGGGACCGCAAATCCACAACAGCAATAGCAACGGCAGT GCAACCGGAAGTCTAAACTGTGCTGCAGTGGCACCGCTCAGTTCGATGAC TCCACCTGCCACCAGTGGCAGTAATTCCGCCGTAGTCTTGCCCCTGCCCA TCTCACCCGCATCCTCAGTCGCTGCCGCAGCTGCTGCTGTCAGCAAGGCC AATGCAAATGCCCTGGCCTCTCTGGCTAACCATCTGCCCATGGGCTTGGG CGTGAGCGGACTGGCCCAGCAGATGTTCCCGCTAGCCACGCTCAAGGCGG CGGCAGTGGCTGCTGGTCTTCCCCTGCCACCTACGATCACGCCGCCTGGT TGCAGCACCGGCAGCGCAACCAACAGCAATGTCGGTTGTCTGATCATCGA GCCGCATCTCTTTGCGGCGGCGGACAACTTCAAGAAGGAACTGACAGCGG CTGCGGCAGCTGGAGCACCTTTGGGATTGTTCCAGAACCTGGCCAACCAA GTGCAGAACGCCAATCGTTTGAACGGCAGCTGCCCGAGCTTACCCATGGG TAATCCCACTCCTCCGCCGCCGCCGCCAGCGCCACCAGCCTCCAAGGTGC GAAGGGTACAACCTTCGCCGCAAACCACGGCCATCAACCTAAGTTGCTCC GGAGGGAATTCCGTACAAACGCAGCAGCAGCAGTCAATGCAAATGCCACA AATTCAACAGCAACAACAGCCGTCGCCCGCCAAAACGCGTAAGATTTGCG ATCCGCGTTTTCCGAGCGATTGGGACGTCTCTGCCGTGCTACAGGCCAAC AGAGAACTTGACGCAAACACTCTTTTCTTCTTGAGTCTGGCGCGGCAGGT GCGAGCTATGCCCATGAAATTCCAGTCGCTCGCCAAGATGCGTTGCATGC GAATCGTCAGTGATTTGGAGCTAGAGCTGGAGAACTTTGATTGCAACGGT GGAGCGCCACCGCCGGATGATTCAGGCGGAGGAGGAGCTGGGAATCTCAA GTACTGCAGCATAGATACTCCGCCACCGCCGCCGCAGGACGGCTCCGTGG TCATACCCCCGCCGCCAGTCGGCCCCGAGGGCTCCACGGAGCACTTTGTG TATGTGATGTCGCCGTCGCGTGTGGAGAGCATGATAGACATCTCCTCCGA CGAGGAGGCGACCATGAACGGAGCGCCCTCCACGGGCCAGGTTTAAGCGT ATTCGTACAAGTTATCTCTAAATTAAAATTAAATTAATCTCAACTAGAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13204-RB | 1804 | CG13204-RB | 8..1804 | 1..1797 | 8970 | 99.9 | Plus |
CG13204.a | 1749 | CG13204.a | 69..1749 | 117..1797 | 8390 | 99.9 | Plus |
CG13204-RA | 2132 | CG13204-RA | 454..2132 | 116..1794 | 8380 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 7256205..7257737 | 265..1797 | 7635 | 99.9 | Plus |
chr2R | 21145070 | chr2R | 7255998..7256149 | 116..267 | 760 | 100 | Plus |
chr2R | 21145070 | chr2R | 7255736..7255850 | 1..115 | 575 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 11368755..11370287 | 265..1797 | 7650 | 99.9 | Plus |
2R | 25286936 | 2R | 11368548..11368699 | 116..267 | 760 | 100 | Plus |
2R | 25286936 | 2R | 11368286..11368400 | 1..115 | 575 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 11369954..11371486 | 265..1797 | 7650 | 99.9 | Plus |
2R | 25260384 | 2R | 11369747..11369898 | 116..267 | 760 | 100 | Plus |
2R | 25260384 | 2R | 11369485..11369599 | 1..115 | 575 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6793..6854 | 1215..1276 | 148 | 71 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2367..2418 | 1222..1276 | 133 | 74.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2345..2402 | 1215..1272 | 128 | 69 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..6797 | 1222..1286 | 123 | 67.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6752..6806 | 1222..1276 | 122 | 69.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2342..2394 | 1215..1270 | 119 | 73.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6841..6899 | 1215..1270 | 116 | 71.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2378..2427 | 1221..1270 | 115 | 70 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6863..6923 | 1211..1270 | 114 | 69.8 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1076..1132 | 1216..1272 | 114 | 66.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 7255736..7255850 | 1..115 | 100 | -> | Plus |
chr2R | 7255998..7256148 | 116..266 | 100 | -> | Plus |
chr2R | 7256207..7257737 | 267..1797 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13204-RA | 183..1818 | 111..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13204-RA | 183..1818 | 111..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13204-RA | 183..1818 | 111..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13204-RA | 183..1818 | 111..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13204-RA | 183..1818 | 111..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13204-RB | 8..1801 | 1..1794 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13204-RB | 8..1801 | 1..1794 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13204-RB | 1..1797 | 1..1797 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13204-RB | 8..1801 | 1..1794 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13204-RB | 1..1797 | 1..1797 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11368548..11368698 | 116..266 | 100 | -> | Plus |
2R | 11368757..11370287 | 267..1797 | 99 | Plus | |
2R | 11368286..11368400 | 1..115 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11368548..11368698 | 116..266 | 100 | -> | Plus |
2R | 11368757..11370287 | 267..1797 | 99 | Plus | |
2R | 11368286..11368400 | 1..115 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11368548..11368698 | 116..266 | 100 | -> | Plus |
2R | 11368757..11370287 | 267..1797 | 99 | Plus | |
2R | 11368286..11368400 | 1..115 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 7256053..7256203 | 116..266 | 100 | -> | Plus |
arm_2R | 7255791..7255905 | 1..115 | 100 | -> | Plus |
arm_2R | 7256262..7257792 | 267..1797 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11369956..11371486 | 267..1797 | 99 | Plus | |
2R | 11369485..11369599 | 1..115 | 100 | -> | Plus |
2R | 11369747..11369897 | 116..266 | 100 | -> | Plus |
Translation from 231 to 1745
> SD21550.pep MDFLKPFQGPGRNSANGNGKSNDEDDTECDFGYQVLAKAASNGGEDELKI TIATASAGCSSMGTHTVNTYTTALSSTSASGITSSLGATTPPNMISPGSN LGGTGGGSGSVGPQIHNSNSNGSATGSLNCAAVAPLSSMTPPATSGSNSA VVLPLPISPASSVAAAAAAVSKANANALASLANHLPMGLGVSGLAQQMFP LATLKAAAVAAGLPLPPTITPPGCSTGSATNSNVGCLIIEPHLFAAADNF KKELTAAAAAGAPLGLFQNLANQVQNANRLNGSCPSLPMGNPTPPPPPPA PPASKVRRVQPSPQTTAINLSCSGGNSVQTQQQQSMQMPQIQQQQQPSPA KTRKICDPRFPSDWDVSAVLQANRELDANTLFFLSLARQVRAMPMKFQSL AKMRCMRIVSDLELELENFDCNGGAPPPDDSGGGGAGNLKYCSIDTPPPP PQDGSVVIPPPPVGPEGSTEHFVYVMSPSRVESMIDISSDEEATMNGAPS TGQV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12551-PA | 793 | GF12551-PA | 286..788 | 1..504 | 1868 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20199-PA | 605 | GG20199-PA | 102..605 | 1..504 | 2557 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21384-PA | 582 | GH21384-PA | 102..568 | 1..497 | 1158 | 62.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13204-PB | 504 | CG13204-PB | 1..504 | 1..504 | 2615 | 100 | Plus |
CG13204-PA | 605 | CG13204-PA | 102..605 | 1..504 | 2615 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18561-PA | 581 | GI18561-PA | 102..560 | 1..497 | 1284 | 66.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11688-PA | 572 | GL11688-PA | 102..567 | 1..500 | 1647 | 72.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24236-PA | 578 | GA24236-PA | 102..564 | 1..497 | 1639 | 72.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21286-PA | 605 | GM21286-PA | 102..605 | 1..504 | 2584 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10794-PA | 605 | GD10794-PA | 102..605 | 1..504 | 2589 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20354-PA | 586 | GJ20354-PA | 102..561 | 1..497 | 1311 | 65.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23098-PA | 624 | GK23098-PA | 102..573 | 1..502 | 1279 | 63.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12359-PA | 603 | GE12359-PA | 102..603 | 1..504 | 2531 | 97.4 | Plus |
Translation from 231 to 1745
> SD21550.hyp MDFLKPFQGPGRNSANGNGKSNDEDDTECDFGYQVLAKAASNGGEDELKI TIATASAGCSSMGTHTVNTYTTALSSTSASGITSSLGATTPPNMISPGSN LGGTGGGSGSVGPQIHNSNSNGSATGSLNCAAVAPLSSMTPPATSGSNSA VVLPLPISPASSVAAAAAAVSKANANALASLANHLPMGLGVSGLAQQMFP LATLKAAAVAAGLPLPPTITPPGCSTGSATNSNVGCLIIEPHLFAAADNF KKELTAAAAAGAPLGLFQNLANQVQNANRLNGSCPSLPMGNPTPPPPPPA PPASKVRRVQPSPQTTAINLSCSGGNSVQTQQQQSMQMPQIQQQQQPSPA KTRKICDPRFPSDWDVSAVLQANRELDANTLFFLSLARQVRAMPMKFQSL AKMRCMRIVSDLELELENFDCNGGAPPPDDSGGGGAGNLKYCSIDTPPPP PQDGSVVIPPPPVGPEGSTEHFVYVMSPSRVESMIDISSDEEATMNGAPS TGQV*