Clone SD22372 Report

Search the DGRC for SD22372

Clone and Library Details

Library:SD
Tissue Source:Drosophila melanogaster Schneider L2 cell culture
Created by:Ling Hong
Date Registered:1999-02-25
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:223
Well:72
Vector:pOT2
Associated Gene/TranscriptCG14194-RA
Protein status:SD22372.pep: gold
Preliminary Size:1077
Sequenced Size:1946

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14194 2002-01-01 Sim4 clustering to Release 2
CG14194 2002-05-18 Blastp of sequenced clone
CG14194 2003-01-01 Sim4 clustering to Release 3
CG14194 2008-04-29 Release 5.5 accounting
CG14194 2008-08-15 Release 5.9 accounting
CG14194 2008-12-18 5.12 accounting

Clone Sequence Records

SD22372.complete Sequence

1946 bp (1946 high quality bases) assembled on 2002-05-18

GenBank Submission: AY119255

> SD22372.complete
TCGATATCGAATCTCGGGACAGAAATGCCAGTCAAAAAAGTGTGTAAATA
AAACAAAGAACAGAATATCTACAGGGAAAGGGGTGAAAGATCGGCGCCAG
GCGTAGAGTACTAACTGCCCCCGCCCCCCCACTCCATCATAACACACAGC
CTTGTTCGGGCGAAGATCGCTTCGTGGAGCGGACGCGGTGCGGCGGGTGC
CCACGAGCAACTAGTGTCCAGGTACCAAGTGCCCAGTGACATAGCTCTAT
GGTGTCCTCAGCAACATGAATCTGGAATCTCTGTTCCGCGACTTCAATCC
CTGCAAGTTCATCGTCCACTGCAGCCTGTTCATCTTTGTCACGCTCTTCG
CCTTGCGCCTCGACAACTACATTGATTGGCCCTACTGGGCGATTTTCACA
CCGCTATGGATATGGAAATGCACCGCCATCCTGGGCGCAATCGTAGGAGC
CATTGTGTGGTGTCGGTATCCGCATTATCGTCTCGAGGGCGATGCCTACA
CGCAGTTCAAAGCGATGCTCATCTCACTGGCCCTGCACCTGATCCTGCTG
ATGTTTGAGCTGCTGGCCTGCGATAAGCTGACCTCGGACCGTCACTTGTG
GGTGCTGGTCTTCATTCCGCTGATCTTCGGCTCGGTGGTTAGTGTGGGCG
CCTGTGTCTGGGCCGTCAAGCACGATCGCTCCTTCGAGCTGGAGCTCTTC
CTGGCGGTCAACGCGCTTCAGTTTGTTTCACTGCCGCTAAAGCTGGATCG
CTTTGTCTACTGGAACTGGGACGTAGTGTTTGTGCCCATGTGGATCGTCA
TATGCCTGAGCCTGGTCAGCGTATTGTATAACATCATCTTCTGTGGCATC
ATGATGCGTACGCCGGAGGTCTCGCTGCAGCAGAAGAAGGCGGCATTAAA
CGCAGCGGTGGGCAACATCTGCACGGTGCTCCCACTGCTCTGCTTTCAGG
TGGTCATCTGCGACAAGCTGGACGGCGAGCTTAAGTTCCCGTACATCGTG
GTCTTCTCACCGCTGCTCGTCTCTATTCTGGCGCTAATAGTTCTTAGCTC
CTCGGCAAAGGGCGGCAACATGTGGTGGTTCGGCATCCGCAAGTCTTTCA
GCCAGTTCCTGTTGTCCGCGATGCCGTTCCTGCAGGAGTACGGCAACATC
AGCTATCACCCGGAAACCCACAGCAATGCTGCACAGTCCATGCCGCTGGA
CGCAGCGTCCTCCTCGACGAGCATGGCGGCCAGCGAGCAGCTGCACGAGT
TCCACAAGCACGACAAGAAGAGCAAGAAGGGGGCCAAGAATGACATTCTC
AAGCCGGTGGTTCCGTTCGTCAGCATCGATCTGCCGGACTAGATATAGAC
GGCCAGTACAGCACAGGAGCAGTACAGGAGCAACAGTAAAACAGCAACAT
CTACAATAAATCGCAAGAACCGCGTAGACTTAAGGACAGCCTCTTTGCAC
GCGCACAAGGAGACGTCGCACACCTTTCTTAAGGTGTTTATGTTAGGCAT
TGTTAAGCATACCCATACCCACTTACACAGTCACGCATCGGTCGTAGCTT
TTAGACTTGTACTGAATTTTAATTGTAAGACAAACGCTAACACCGCCCAC
GAACCATGTCCAACCAACCAACCAACCAACCAAGCACATCGCACCCACCA
TGCTCCCTTCCACGCATCCGCCTGCATATGATAGCACATATAGCACATAC
ATGCATACAGGACCTGACCACCACACGCTTTTGTCCAGACCCGAATCGGA
CTCCAACTTGACCACAAATTGAACAGCGCCGCATTCGGAATTTTGACTCG
TGTGCTAGTATTATATGTAAAACATCTCTCACACCTTGAGAAGCCCACTT
ATGTGTAATGACCTACTATAAAGTGTAAATAATTAACAGAGTACGTGAAA
ACGAGAAATATACTTAAGTGCTTCCATCAAAAAAAAAAAAAAAAAA

SD22372.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:00:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG14194-RA 2026 CG14194-RA 46..1977 1..1932 9525 99.5 Plus
CG14194.a 1994 CG14194.a 430..1988 374..1932 7675 99.4 Plus
CG14194.b 1866 CG14194.b 374..1860 446..1932 7315 99.4 Plus
CG14194.a 1994 CG14194.a 1..374 1..374 1855 99.7 Plus
CG14194.b 1866 CG14194.b 1..374 1..374 1855 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:16:55
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 19083967..19084948 947..1928 4850 99.6 Plus
chrX 22417052 chrX 19083332..19083910 374..952 2895 100 Plus
chrX 22417052 chrX 19082476..19082778 1..303 1515 100 Plus
chrX 22417052 chrX 19082856..19082927 303..374 360 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:57:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:16:53
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19195056..19196041 947..1932 4810 99.2 Plus
X 23542271 X 19194423..19195001 374..952 2895 100 Plus
X 23542271 X 19193567..19193869 1..303 1500 99.7 Plus
X 23542271 X 19193947..19194018 303..374 360 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:32:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 19203154..19204139 947..1932 4810 99.1 Plus
X 23527363 X 19202521..19203099 374..952 2895 100 Plus
X 23527363 X 19201665..19201967 1..303 1500 99.6 Plus
X 23527363 X 19202045..19202116 303..374 360 100 Plus
Blast to na_te.dros performed on 2019-03-16 15:16:53 has no hits.

SD22372.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:17:50 Download gff for SD22372.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 19082476..19082778 1..303 100 -> Plus
chrX 19082857..19082927 304..374 100 -> Plus
chrX 19083333..19083907 375..949 100 -> Plus
chrX 19083970..19084948 950..1928 97   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 21:10:04 Download gff for SD22372.complete
Subject Subject Range Query Range Percent Splice Strand
CG14194-RA 1..1077 266..1342 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:40:04 Download gff for SD22372.complete
Subject Subject Range Query Range Percent Splice Strand
CG14194-RA 1..1077 266..1342 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:07:35 Download gff for SD22372.complete
Subject Subject Range Query Range Percent Splice Strand
CG14194-RA 1..1077 266..1342 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:31:50 Download gff for SD22372.complete
Subject Subject Range Query Range Percent Splice Strand
CG14194-RA 1..1077 266..1342 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:39:12 Download gff for SD22372.complete
Subject Subject Range Query Range Percent Splice Strand
CG14194-RA 1..1077 266..1342 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:13:27 Download gff for SD22372.complete
Subject Subject Range Query Range Percent Splice Strand
CG14194-RA 1..1928 1..1928 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:40:04 Download gff for SD22372.complete
Subject Subject Range Query Range Percent Splice Strand
CG14194-RA 1..1928 1..1928 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:35 Download gff for SD22372.complete
Subject Subject Range Query Range Percent Splice Strand
CG14194-RA 13..1940 1..1928 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:31:50 Download gff for SD22372.complete
Subject Subject Range Query Range Percent Splice Strand
CG14194-RA 1..1928 1..1928 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:39:12 Download gff for SD22372.complete
Subject Subject Range Query Range Percent Splice Strand
CG14194-RA 13..1940 1..1928 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:17:50 Download gff for SD22372.complete
Subject Subject Range Query Range Percent Splice Strand
X 19193948..19194018 304..374 100 -> Plus
X 19193567..19193869 1..303 99 -> Plus
X 19194424..19194998 375..949 100 -> Plus
X 19195059..19196037 950..1928 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:17:50 Download gff for SD22372.complete
Subject Subject Range Query Range Percent Splice Strand
X 19193948..19194018 304..374 100 -> Plus
X 19193567..19193869 1..303 99 -> Plus
X 19194424..19194998 375..949 100 -> Plus
X 19195059..19196037 950..1928 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:17:50 Download gff for SD22372.complete
Subject Subject Range Query Range Percent Splice Strand
X 19193948..19194018 304..374 100 -> Plus
X 19193567..19193869 1..303 99 -> Plus
X 19194424..19194998 375..949 100 -> Plus
X 19195059..19196037 950..1928 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:35 Download gff for SD22372.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 19087600..19087902 1..303 99 -> Plus
arm_X 19087981..19088051 304..374 100 -> Plus
arm_X 19088457..19089031 375..949 100 -> Plus
arm_X 19089092..19090070 950..1928 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:04:23 Download gff for SD22372.complete
Subject Subject Range Query Range Percent Splice Strand
X 19201665..19201967 1..303 99 -> Plus
X 19202046..19202116 304..374 100 -> Plus
X 19202522..19203096 375..949 100 -> Plus
X 19203157..19204135 950..1928 99   Plus

SD22372.pep Sequence

Translation from 265 to 1341

> SD22372.pep
MNLESLFRDFNPCKFIVHCSLFIFVTLFALRLDNYIDWPYWAIFTPLWIW
KCTAILGAIVGAIVWCRYPHYRLEGDAYTQFKAMLISLALHLILLMFELL
ACDKLTSDRHLWVLVFIPLIFGSVVSVGACVWAVKHDRSFELELFLAVNA
LQFVSLPLKLDRFVYWNWDVVFVPMWIVICLSLVSVLYNIIFCGIMMRTP
EVSLQQKKAALNAAVGNICTVLPLLCFQVVICDKLDGELKFPYIVVFSPL
LVSILALIVLSSSAKGGNMWWFGIRKSFSQFLLSAMPFLQEYGNISYHPE
THSNAAQSMPLDAASSSTSMAASEQLHEFHKHDKKSKKGAKNDILKPVVP
FVSIDLPD*

SD22372.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 04:10:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15942-PA 364 GF15942-PA 1..364 1..358 1746 93.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 04:10:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19213-PA 358 GG19213-PA 1..358 1..358 1836 96.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 04:10:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24107-PA 359 GH24107-PA 1..359 1..358 1720 93 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:30:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG14194-PA 358 CG14194-PA 1..358 1..358 1893 100 Plus
CG14194-PB 334 CG14194-PB 1..334 1..358 1711 93.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 04:10:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14455-PA 267 GI14455-PA 1..249 1..249 1193 94.8 Plus
Dmoj\GI21358-PA 96 GI21358-PA 1..76 229..304 356 89.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 04:10:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12981-PA 232 GL12981-PA 1..135 1..135 711 97.8 Plus
Dper\GL12981-PA 232 GL12981-PA 24..232 153..358 506 53.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 04:10:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12816-PA 358 GA12816-PA 1..358 1..358 1773 95 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 04:10:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22949-PA 358 GM22949-PA 1..358 1..358 1872 99.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 04:10:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17431-PA 358 GD17431-PA 1..358 1..358 1872 99.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 04:10:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18790-PA 358 GJ18790-PA 1..358 1..358 1654 92.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 04:10:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25173-PA 359 GK25173-PA 1..359 1..358 1798 95 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 04:10:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17777-PA 358 GE17777-PA 1..358 1..358 1855 98 Plus

SD22372.hyp Sequence

Translation from 265 to 1341

> SD22372.hyp
MNLESLFRDFNPCKFIVHCSLFIFVTLFALRLDNYIDWPYWAIFTPLWIW
KCTAILGAIVGAIVWCRYPHYRLEGDAYTQFKAMLISLALHLILLMFELL
ACDKLTSDRHLWVLVFIPLIFGSVVSVGACVWAVKHDRSFELELFLAVNA
LQFVSLPLKLDRFVYWNWDVVFVPMWIVICLSLVSVLYNIIFCGIMMRTP
EVSLQQKKAALNAAVGNICTVLPLLCFQVVICDKLDGELKFPYIVVFSPL
LVSILALIVLSSSAKGGNMWWFGIRKSFSQFLLSAMPFLQEYGNISYHPE
THSNAAQSMPLDAASSSTSMAASEQLHEFHKHDKKSKKGAKNDILKPVVP
FVSIDLPD*

SD22372.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:11:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG14194-PA 358 CG14194-PA 1..358 1..358 1893 100 Plus
CG14194-PB 334 CG14194-PB 1..334 1..358 1711 93.3 Plus