Clone SD22791 Report

Search the DGRC for SD22791

Clone and Library Details

Library:SD
Tissue Source:Drosophila melanogaster Schneider L2 cell culture
Created by:Ling Hong
Date Registered:1999-02-25
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:227
Well:91
Vector:pOT2
Associated Gene/TranscriptCG16989-RA
Protein status:SD22791.pep: gold
Preliminary Size:3138
Sequenced Size:3206

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG16989 2002-01-01 Sim4 clustering to Release 2
CG16989 2002-05-18 Blastp of sequenced clone
CG16989 2003-01-01 Sim4 clustering to Release 3
CG16989 2008-04-29 Release 5.5 accounting
CG16989 2008-08-15 Release 5.9 accounting
CG16989 2008-12-18 5.12 accounting

Clone Sequence Records

SD22791.complete Sequence

3206 bp (3206 high quality bases) assembled on 2002-05-18

GenBank Submission: AY119261

> SD22791.complete
CTGCGCCGTGAGCTTCTGGAGGCGGAGTCTAGAACGGATCAGGAAGAAGC
GGATCGCGACTCGCACTTACAGCTCGTCCGAGAAGTGGACCACAATGTTG
GCGTGCCCGTGGGCGTGGCGGCATATCGTCTGCAGCAACTAATCGCGGGT
GTACGAGCGAGAGGCCACCACGACTTGTTGCGTCTTTGGCAGCTGTGGCT
CAACGAGCTAATCTTGGCCAAGAAAATAATTCTGGTAAGGTCGCACCTAC
TCATAGAGGAGCTATTGGCAGGAATAGAGTTGAAGCCGTCCGTCGAAACT
GTCAACTTGATGTTGACTGTGCTTAAATCCACCCCGAAGGAGAACCTGGC
TGGGTTTTGGCCCCGATTGAGCGCATTAACTCATGCCAAAGATATGGACG
TCGCTCTGTTGCTGCTGCAATGCCAAGATCGTGTGCTGGCCGAGCTGGAG
GAATCGCCGGAGGTGGCCGAGCACAACCAGGGACTGGTTAACTCCCTCAT
CAACATGCACTTTGAGGGACGCTGGCTGGTCGCCAAGGAGCAGTTGCCCC
TGCTGCTGGCGCAGAGCCTGCAACTGATTCAGAAGCTGGTGACCAGGCAG
CCCGACTACGCCGCGCAAAGAGTCCCCGAACTGATGGGGCTAGTCCAATG
CTATCTGCAGTATGGAGCTGAAGGAGAAACCCACCTAAAGCCCCGGAAGT
TGCCGCCCGCACAACAGTCGGCTGCCTATGGGCAGGAGAAGGAAGAGGAA
GACCAGCTGCTGGCCCAGATGTCCCGCCCTTGTGGTCGCAAGAACAAAGT
GCGCAAGATGCGTTCGCTTGCCAAACAGCGCAACCAGGCGGTCAATGAAC
ACCATGAGCCGAATCCGCGAGAGCGTCTGGTACTGATGGGTAACCAGGAC
TACGGCTGCTTAACTGGAGACTCGGGCGAGAACGGGCTGCCCTCTGATTC
GGATCAGCAGCAGACAGAAAACAAGCACCATCGGCACCAAGAGGCCAAGG
TGAGGATCTCCGCATTACATTTGCTCAGCACCCTGACCAACCAACTGCCG
CGCCGCTCGTTTTATGGCTACTGGCACGTCCTGTTCCCTGACGGAGACGC
GGGTGGTACTCCCCACCTACTGCTCCTTGGTCTGAAAGACACAAATTTCC
GTTGTCGAGCTCTGGCCCTGCAGGTGGGAGCGCAGCTGTTGTACGGTTCA
AAGGCATTCCTCAGCCAGGCATGCTCGCTCGGACCCAGCAACTTTACGCC
ATTTGCCGTCAGCCTGGCCAGCTCTGTATTGACCGCTTATCGCATCTTGA
TCGCTATCCTCGAGAGAGAGTATACACCGCCTGTGCTGACCCAGTGCCTC
AAGTGCTTAGCCGTTTTGGTGCAAGCCACGCCCTTTCATCAGCTGGAAAT
GGGATTTGTCTACGAGTTTGTGGGCCACGTGAAAAAACTGATAAAGAGTA
GTGACCCTCCGGTCGCCGTGTCCGCCTTACTGGTCATGGAAATGCTGGTG
GGCACATCCAAGCTTACACCGGAGATTGCCAGCTCCATAGGACTGGCTCC
AAGTCAGAGAAACCTTCAAATGGAACACGCGAGTACGGCGGAAACATACC
AGGAGTTGTGCGACTCGGATGCGGAGATGGAACTCGAGGAGGGGGATGAG
CAGCAGCAGCCATCGCAGAACAATGTGGTGAATCCCGTCCACACAGTGTC
CCCAACCATTCCGCGCAATTCATGGCTGCTAAGGCAGGTCCTCCGCTGTC
TGGAGGGCATGAGAATTCCATCCGCCGTGCGCTTGGAGTGTTTCCAGGTG
CTTCAGGCCATGGCCACACACATAGGCCTGCTGCGAGGACATCAGGTGCG
TTTGTCAAGGGTGATATCCGCTGGGCTGACTGATCCCGCTACAGATGTAA
AGCTGTACGCCGCACGCTGCTTGGATTCAGTTGGCTACCAGTTGGGCAGA
CTGTTACCGGAACCGGCAGAACGGGAGCTGCAGATGTCGTTTTGGCTTAC
CCTGCTGCCGGCCACCTATGAAGCCTACGATTCCGCCGGTTTCTCCTTGA
AGTGCGCGCTCTGCGACGCCCTGTCCAACATGGGTGCTATTAGCTTTGAG
AGACTACCGGATGGCCAGAGGACCGCCCTGTTGGCCTTCCTAAGCGGTTG
CGCCAGCGACGATCATGAGGAAACACTGGTCAGGGTAGCCGCTTTGCGGG
CTATGGCCGTCTACGTGCTGCATCCCTCGCTAAGGACGGATCTTGGATTT
GTGGAGAATGCAGCGGAGCTGACATTGCGTATCTTAGGTGATTCCCAGCT
CTTGGCTAGAATCAAGGCCGCATGGGCCCTGGGGAACATCAGTGACGCAC
TGGTGGCCGGTATTCCCAACCAGACCGAACGAATTTCCGCCGAACTTTTA
GAACGCCTCATCCAGGCAGCCACCAAGAGCTGTGCCGATAACGACAAGGT
CAGGGCCAACGCGGTGCGTGCCCTGGGAAATCTCTTGCAGATCTTGCAGG
TCCAGCCCTTAGGAAACGGTGAACTGATGCAAGTGGCCATGTCTAAGCTG
CTAGACTGTGTAACATTGCCAGGCAACGCTAAGGTGAAGTGGAATGCATG
CTATGTCATCGGAAACCTAGTGAAGCACAGGGCTTTCTTTGCCAACAACC
GCCTGGCTGGTATCTTATTTCCCACCCTGTGTCAGTTGGTGGTGCAGCAC
GCTAACTTCAAGGTACGCACCAATGCAGCCGGAGTTCTGCTGCAGGTCAA
GCAGCGTGAGGACTTCAGTGCCCACTTTCCTCTGCTATGGCGTTCGCTCC
TGGACGCTCTGGTGCGCTCTAATGTATTGGAAAGCTTTGAAGAGTACAAC
CACCGGGATGCACTTCAGCAACAGTTGTGCCTAGCCATTGCCCACCTACT
GTTGCTGGCCAGGAGCTCGGATCTGCCGATGATGCGAGAGTCCCTAGAGG
AGGATCGCCTAGAGGAGGTGCAGGCCACGTGGCGGCGCGTCGCATTCCGC
ATTGTTCCTGAGCAGTCGGATCCGCTCTTCACCTGCAGTCCTCTGCTGCA
GCAGCGTCTCCAAGGGGATGTCAACAATCTGCAGCGCTGCGCCTTGGCGT
TCATCACTAGCACACTCCGCCTGGACCCATAGAAGCCTCCTGCTTTAATC
TACCTAACAAAACAAAAATAAATTAATTTTAAATGTTAAAAAAAAAAAAA
AAAAAA

SD22791.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:59:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG16989-RA 3204 CG16989-RA 1..3189 1..3189 15915 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:58:10
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 687148..690334 1..3187 15890 99.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:57:56 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:58:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 793168..796356 1..3189 15915 99.9 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:31:54
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 801266..804454 1..3189 15915 99.9 Plus
Blast to na_te.dros performed on 2019-03-15 16:58:08 has no hits.

SD22791.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:59:06 Download gff for SD22791.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 687148..690309 1..3162 99 <- Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 21:10:16 Download gff for SD22791.complete
Subject Subject Range Query Range Percent Splice Strand
CG16989-RA 1..2823 310..3132 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:39:54 Download gff for SD22791.complete
Subject Subject Range Query Range Percent Splice Strand
CG16989-RA 1..2823 310..3132 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:13:32 Download gff for SD22791.complete
Subject Subject Range Query Range Percent Splice Strand
CG16989-RA 1..2823 310..3132 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:31:37 Download gff for SD22791.complete
Subject Subject Range Query Range Percent Splice Strand
CG16989-RA 1..2823 310..3132 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:22:00 Download gff for SD22791.complete
Subject Subject Range Query Range Percent Splice Strand
CG16989-RA 1..2823 310..3132 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:13:13 Download gff for SD22791.complete
Subject Subject Range Query Range Percent Splice Strand
CG16989-RA 1..3187 1..3187 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:39:54 Download gff for SD22791.complete
Subject Subject Range Query Range Percent Splice Strand
CG16989-RA 1..3187 1..3187 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:13:32 Download gff for SD22791.complete
Subject Subject Range Query Range Percent Splice Strand
CG16989-RA 22..3208 1..3187 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:31:37 Download gff for SD22791.complete
Subject Subject Range Query Range Percent Splice Strand
CG16989-RA 1..3187 1..3187 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:22:00 Download gff for SD22791.complete
Subject Subject Range Query Range Percent Splice Strand
CG16989-RA 22..3208 1..3187 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:59:06 Download gff for SD22791.complete
Subject Subject Range Query Range Percent Splice Strand
X 793168..796354 1..3187 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:59:06 Download gff for SD22791.complete
Subject Subject Range Query Range Percent Splice Strand
X 793168..796354 1..3187 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:59:06 Download gff for SD22791.complete
Subject Subject Range Query Range Percent Splice Strand
X 793168..796354 1..3187 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:13:32 Download gff for SD22791.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 687201..690387 1..3187 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:04:13 Download gff for SD22791.complete
Subject Subject Range Query Range Percent Splice Strand
X 801266..804452 1..3187 99   Plus

SD22791.hyp Sequence

Translation from 0 to 3131

> SD22791.hyp
LRRELLEAESRTDQEEADRDSHLQLVREVDHNVGVPVGVAAYRLQQLIAG
VRARGHHDLLRLWQLWLNELILAKKIILVRSHLLIEELLAGTELKPSVET
VNLMLTVLKSTPKENLAGFWPRLSALTHAKDMDVALLLLQCQDRVLAELE
ESPEVAEHNQGLVNSLINMHFEGRWLVAKEQLPLLLAQSLQLIQKLVTRQ
PDYAAQRVPELMGLVQCYLQYGAEGETHLKPRKLPPAQQSAAYGQEKEEE
DQLLAQMSRPCGRKNKVRKMRSLAKQRNQAVNEHHEPNPRERLVLMGNQD
YGCLTGDSGENGLPSDSDQQQTENKHHRHQEAKVRISALHLLSTLTNQLP
RRSFYGYWHVLFPDGDAGGTPHLLLLGLKDTNFRCRALALQVGAQLLYGS
KAFLSQACSLGPSNFTPFAVSLASSVLTAYRILIAILEREYTPPVLTQCL
KCLAVLVQATPFHQLEMGFVYEFVGHVKKLIKSSDPPVAVSALLVMEMLV
GTSKLTPEIASSIGLAPSQRNLQMEHASTAETYQELCDSDAEMELEEGDE
QQQPSQNNVVNPVHTVSPTIPRNSWLLRQVLRCLEGMRIPSAVRLECFQV
LQAMATHIGLLRGHQVRLSRVISAGLTDPATDVKLYAARCLDSVGYQLGR
LLPEPAERELQMSFWLTLLPATYEAYDSAGFSLKCALCDALSNMGAISFE
RLPDGQRTALLAFLSGCASDDHEETLVRVAALRAMAVYVLHPSLRTDLGF
VENAAELTLRILGDSQLLARIKAAWALGNISDALVAGIPNQTERISAELL
ERLIQAATKSCADNDKVRANAVRALGNLLQILQVQPLGNGELMQVAMSKL
LDCVTLPGNAKVKWNACYVIGNLVKHRAFFANNRLAGILFPTLCQLVVQH
ANFKVRTNAAGVLLQVKQREDFSAHFPLLWRSLLDALVRSNVLESFEEYN
HRDALQQQLCLAIAHLLLLARSSDLPMMRESLEEDRLEEVQATWRRVAFR
IVPEQSDPLFTCSPLLQQRLQGDVNNLQRCALAFITSTLRLDP*

SD22791.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:17:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG16989-PB 940 CG16989-PB 1..940 104..1043 4807 100 Plus
CG16989-PA 940 CG16989-PA 1..940 104..1043 4807 100 Plus

SD22791.pep Sequence

Translation from 309 to 3131

> SD22791.pep
MLTVLKSTPKENLAGFWPRLSALTHAKDMDVALLLLQCQDRVLAELEESP
EVAEHNQGLVNSLINMHFEGRWLVAKEQLPLLLAQSLQLIQKLVTRQPDY
AAQRVPELMGLVQCYLQYGAEGETHLKPRKLPPAQQSAAYGQEKEEEDQL
LAQMSRPCGRKNKVRKMRSLAKQRNQAVNEHHEPNPRERLVLMGNQDYGC
LTGDSGENGLPSDSDQQQTENKHHRHQEAKVRISALHLLSTLTNQLPRRS
FYGYWHVLFPDGDAGGTPHLLLLGLKDTNFRCRALALQVGAQLLYGSKAF
LSQACSLGPSNFTPFAVSLASSVLTAYRILIAILEREYTPPVLTQCLKCL
AVLVQATPFHQLEMGFVYEFVGHVKKLIKSSDPPVAVSALLVMEMLVGTS
KLTPEIASSIGLAPSQRNLQMEHASTAETYQELCDSDAEMELEEGDEQQQ
PSQNNVVNPVHTVSPTIPRNSWLLRQVLRCLEGMRIPSAVRLECFQVLQA
MATHIGLLRGHQVRLSRVISAGLTDPATDVKLYAARCLDSVGYQLGRLLP
EPAERELQMSFWLTLLPATYEAYDSAGFSLKCALCDALSNMGAISFERLP
DGQRTALLAFLSGCASDDHEETLVRVAALRAMAVYVLHPSLRTDLGFVEN
AAELTLRILGDSQLLARIKAAWALGNISDALVAGIPNQTERISAELLERL
IQAATKSCADNDKVRANAVRALGNLLQILQVQPLGNGELMQVAMSKLLDC
VTLPGNAKVKWNACYVIGNLVKHRAFFANNRLAGILFPTLCQLVVQHANF
KVRTNAAGVLLQVKQREDFSAHFPLLWRSLLDALVRSNVLESFEEYNHRD
ALQQQLCLAIAHLLLLARSSDLPMMRESLEEDRLEEVQATWRRVAFRIVP
EQSDPLFTCSPLLQQRLQGDVNNLQRCALAFITSTLRLDP*

SD22791.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 04:09:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22106-PA 1061 GF22106-PA 111..1061 1..940 2975 65 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 04:09:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12811-PA 1042 GG12811-PA 106..1042 1..940 4254 88.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 04:09:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12298-PA 1153 GH12298-PA 123..1152 2..939 2216 50.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:11:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG16989-PB 940 CG16989-PB 1..940 1..940 4807 100 Plus
CG16989-PA 940 CG16989-PA 1..940 1..940 4807 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 04:09:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15805-PA 1144 GI15805-PA 122..1143 1..939 2133 49.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 04:09:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14201-PA 1076 GL14201-PA 121..1076 1..940 2535 58.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 04:09:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14261-PA 1085 GA14261-PA 121..1085 1..940 2534 57.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 04:09:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19092-PA 679 GM19092-PA 229..645 501..913 1985 94.2 Plus
Dsec\GM19092-PA 679 GM19092-PA 4..238 182..415 1100 88.9 Plus
Dsec\GM19091-PA 231 GM19091-PA 106..227 1..122 585 92.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 04:09:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18659-PA 1123 GJ18659-PA 122..1122 1..939 2290 52.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 04:09:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19879-PA 1058 GK19879-PA 114..1057 1..939 2411 55.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 04:09:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16639-PA 1045 GE16639-PA 106..1045 1..940 4408 89.9 Plus
Dyak\GE16445-PA 194 GE16445-PA 56..161 524..629 423 77.4 Plus
Dyak\GE16445-PA 194 GE16445-PA 158..194 693..729 162 91.9 Plus