BDGP Sequence Production Resources |
Search the DGRC for SD22926
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 229 |
Well: | 26 |
Vector: | pOT2 |
Associated Gene/Transcript | Nup37-RA |
Protein status: | SD22926.pep: gold |
Preliminary Size: | 1027 |
Sequenced Size: | 1097 |
Gene | Date | Evidence |
---|---|---|
CG11875 | 2004-03-05 | Blastp of sequenced clone |
CG11875 | 2008-04-29 | Release 5.5 accounting |
CG11875 | 2008-08-15 | Release 5.9 accounting |
CG11875 | 2008-12-18 | 5.12 accounting |
1097 bp (1097 high quality bases) assembled on 2004-03-05
GenBank Submission: BT012297
> SD22926.complete ATTTTTTTGGCGCCGGCTAATTGTTGCATATATCCCGCGAATAACAAACA ATATTTATAGAAAGATGCGATCTGTCATCGAGCCCGACCACAGCATCCAG CTTAATGAAGCCATCTACTGCTACGATATATGCACCAATGACTTTGCCTA CAACCTAATCGCAGTGGCCTTCAGGAAACACTTGAGTCTGCTGCTCGTTG GACTGCCGGAGGAGAGCGGCGAGTTCGGGTACACACGCCTGCAGGACATG GACCTGGGCGAAAAGGAGCAGCGGAGCGTGAGCGCACTGGCCTTCTCGCC GGACACCTCGCTCAACTGCACGCCCAACAATGTGACTTTGTGCGCGGCCA ACGGCAGCCAGCTTAAACTATACCGCACCGATCTGGGCCAGTTCACCTCG CTCCAGGTGCTCCGTGGGCATGGGGACTACGTCAACGATGTATCCTGGGT TTGCGACGGCGAACTGCTGGCCTCCGTTAGCGATGACTTCACCTGCAGAT TCTGGACGACGACAGGCGGCGGGGAGAATGTCATAACCTTTGGCCTGTCC TCCGCTGGAATGTCCGTCAAGAGTCACCCCGAGGATCCCAACAAGGTTCT TGTGGCGGAAAAGAAGGGCATCATTCATCTATACAATGTGACGCTCAAGC AGACAGTCATCTCCGTGGAGTCGCCCAAATTCCCCCTGATGTCGGCGGAC TGGGCCCACAGCAACCGGCTCTTCATCACCTCGCTGGCCGGCGGAGATGT GGTTACCTGGGACCTGAACCGACCCTATGTGCCCGCGGATGTCAAGCAGG TCCACGAGGATTGCGGCCGGGTGGTGCGCTTCGCGCCAGGCAGCTCCGAG ATGGTTATCGCCATGGTCATCGGGCTGACTCTCAAAGTGTTCGCGGCCAA GTCGACCGTTCCTCTGCTGGAGGCCTCCCTGAAATCCTATGGGGGAATGG CCTGGCACCAGCGATTGCCGTACATTAGTGCGGTTTCCGATAGGAAACTG CTCTTCTGGAAAGTGCAAATGAAGTAATTTATATAAAATTGTATGAATAA TAAATAAAAGAATATAAAAAATATGATATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 21071722..21072184 | 617..1079 | 2315 | 100 | Plus |
chr3R | 27901430 | chr3R | 21071256..21071666 | 208..618 | 2055 | 100 | Plus |
chr3R | 27901430 | chr3R | 21070983..21071191 | 1..209 | 1045 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 25248638..25249106 | 617..1085 | 2345 | 100 | Plus |
3R | 32079331 | 3R | 25248172..25248582 | 208..618 | 2055 | 100 | Plus |
3R | 32079331 | 3R | 25247899..25248107 | 1..209 | 1045 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 24989469..24989937 | 617..1085 | 2345 | 100 | Plus |
3R | 31820162 | 3R | 24989003..24989413 | 208..618 | 2055 | 100 | Plus |
3R | 31820162 | 3R | 24988730..24988938 | 1..209 | 1045 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 21070983..21071190 | 1..208 | 100 | -> | Plus |
chr3R | 21071257..21071665 | 209..617 | 100 | -> | Plus |
chr3R | 21071723..21072128 | 618..1023 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11875-RA | 1..963 | 65..1027 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11875-RA | 1..963 | 65..1027 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup37-RA | 1..963 | 65..1027 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11875-RA | 1..963 | 65..1027 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup37-RA | 1..963 | 65..1027 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11875-RA | 22..1100 | 1..1079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11875-RA | 22..1100 | 1..1079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup37-RA | 29..1107 | 1..1079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11875-RA | 22..1100 | 1..1079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup37-RA | 29..1107 | 1..1079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25247899..25248106 | 1..208 | 100 | -> | Plus |
3R | 25248173..25248581 | 209..617 | 100 | -> | Plus |
3R | 25248639..25249100 | 618..1079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25247899..25248106 | 1..208 | 100 | -> | Plus |
3R | 25248173..25248581 | 209..617 | 100 | -> | Plus |
3R | 25248639..25249100 | 618..1079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25247899..25248106 | 1..208 | 100 | -> | Plus |
3R | 25248173..25248581 | 209..617 | 100 | -> | Plus |
3R | 25248639..25249100 | 618..1079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 21073621..21073828 | 1..208 | 100 | -> | Plus |
arm_3R | 21073895..21074303 | 209..617 | 100 | -> | Plus |
arm_3R | 21074361..21074822 | 618..1079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24988730..24988937 | 1..208 | 100 | -> | Plus |
3R | 24989004..24989412 | 209..617 | 100 | -> | Plus |
3R | 24989470..24989931 | 618..1079 | 100 | Plus |
Translation from 0 to 1026
> SD22926.hyp FFWRRLIVAYIPRITNNIYRKMRSVIEPDHSIQLNEAIYCYDICTNDFAY NLIAVAFRKHLSLLLVGLPEESGEFGYTRLQDMDLGEKEQRSVSALAFSP DTSLNCTPNNVTLCAANGSQLKLYRTDLGQFTSLQVLRGHGDYVNDVSWV CDGELLASVSDDFTCRFWTTTGGGENVITFGLSSAGMSVKSHPEDPNKVL VAEKKGIIHLYNVTLKQTVISVESPKFPLMSADWAHSNRLFITSLAGGDV VTWDLNRPYVPADVKQVHEDCGRVVRFAPGSSEMVIAMVIGLTLKVFAAK STVPLLEASLKSYGGMAWHQRLPYISAVSDRKLLFWKVQMK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nup37-PB | 320 | CG11875-PB | 1..320 | 22..341 | 1672 | 100 | Plus |
Nup37-PA | 320 | CG11875-PA | 1..320 | 22..341 | 1672 | 100 | Plus |
CG10931-PA | 345 | CG10931-PA | 60..254 | 102..300 | 174 | 28.6 | Plus |
Translation from 64 to 1026
> SD22926.pep MRSVIEPDHSIQLNEAIYCYDICTNDFAYNLIAVAFRKHLSLLLVGLPEE SGEFGYTRLQDMDLGEKEQRSVSALAFSPDTSLNCTPNNVTLCAANGSQL KLYRTDLGQFTSLQVLRGHGDYVNDVSWVCDGELLASVSDDFTCRFWTTT GGGENVITFGLSSAGMSVKSHPEDPNKVLVAEKKGIIHLYNVTLKQTVIS VESPKFPLMSADWAHSNRLFITSLAGGDVVTWDLNRPYVPADVKQVHEDC GRVVRFAPGSSEMVIAMVIGLTLKVFAAKSTVPLLEASLKSYGGMAWHQR LPYISAVSDRKLLFWKVQMK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17555-PA | 322 | GF17555-PA | 1..322 | 1..320 | 1360 | 76.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11381-PA | 320 | GG11381-PA | 1..320 | 1..320 | 1627 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17354-PA | 334 | GH17354-PA | 1..334 | 1..320 | 1129 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nup37-PB | 320 | CG11875-PB | 1..320 | 1..320 | 1672 | 100 | Plus |
Nup37-PA | 320 | CG11875-PA | 1..320 | 1..320 | 1672 | 100 | Plus |
CG10931-PA | 345 | CG10931-PA | 60..254 | 81..279 | 174 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23891-PA | 322 | GI23891-PA | 1..322 | 1..320 | 1223 | 68.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11990-PA | 322 | GL11990-PA | 1..322 | 1..320 | 1268 | 71.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11251-PA | 322 | GA11251-PA | 1..322 | 1..320 | 1268 | 71.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17824-PA | 320 | GM17824-PA | 1..320 | 1..320 | 1676 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21192-PA | 320 | GD21192-PA | 1..320 | 1..320 | 1676 | 97.5 | Plus |
Dsim\GD13274-PA | 257 | GD13274-PA | 1..210 | 1..210 | 1081 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23983-PA | 322 | GJ23983-PA | 1..322 | 1..320 | 1243 | 70 | Plus |
Dvir\GJ22241-PA | 373 | GJ22241-PA | 74..323 | 66..320 | 150 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12951-PA | 322 | GK12951-PA | 1..322 | 1..320 | 1251 | 70.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23578-PA | 320 | GE23578-PA | 1..320 | 1..320 | 1629 | 93.8 | Plus |