BDGP Sequence Production Resources |
Search the DGRC for SD23052
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 230 |
Well: | 52 |
Vector: | pOT2 |
Associated Gene/Transcript | Art3-RB |
Protein status: | SD23052.pep: gold |
Preliminary Size: | 1779 |
Sequenced Size: | 1814 |
Gene | Date | Evidence |
---|---|---|
CG6563 | 2002-12-13 | Blastp of sequenced clone |
CG6563 | 2003-01-01 | Sim4 clustering to Release 3 |
Art3 | 2008-04-29 | Release 5.5 accounting |
Art3 | 2008-08-15 | Release 5.9 accounting |
Art3 | 2008-12-18 | 5.12 accounting |
1814 bp (1814 high quality bases) assembled on 2002-12-13
GenBank Submission: BT003167
> SD23052.complete TGTTCGCGCCGCTCAAAACCCCATTTAGTTGGCATTTATAAATTTGTGAT CTTCGTCGTGCGATTTGAATTCTTTTCTCTGAAAGCAGGCCAATAGGACT TGCAAACAAAGATAGCATGAAAGACACCGAGGTCAACGGTTCGAGCCCGT AAAAGCTTTTATTTCCTGGAGATGATTACTTATTAATCCCATCCCAATGT AGACAACACCACAGAGGAGGAGCCCGTGAAGGAGGCACCTGAGGTGCCGG CCAATTCCAGCTCCGACGAAGATGAGTACGATGACATAGATGACGATGAT GAGCCAATGGACGAAGGCGATGAGCTAACCACTTGTCTGTTTTGCACCGA AACATCTGCAAACATCTCGGTGGCCATTGACCATCTTGACGCCCGGCATA AAGTGAATCTGTCCCAGCTTCAGCGTAAATTCGAAATGGACCAGTATTCC TTTATCAAACTGATAAACTACATAAGAGCCAAAAAGATCAGTGCCGAGCA GTTATTGTCTGCGGAACATCCGCTTTGGCAGGATGAGAAGTACCTCCAGC CCGGGGAGTATGAGCCCTGGCTCTGCTATGACTACGAAGTCCTTAAAACA GACGGCGCTCCGACGCAGCCCTCGGTTCTGGAGCTACAACAGCGGATTGC TGAGCAGTCGCAATTGCTGCAGCAGGCCAACGAGGACATGGAACGCATGC GCAACGACTACAAGGCGCTGCTGCAAAAGGTACATGCTGACGGCGAGCCC AAAGGTTCCGACCAGAGCGTACCGCGTAACAACGTTTGTCTCGACAACGA ATACTTCAAAAGCTACGCCCACTTTGGCATTCACCATGAAATGCTCAGCG ACAAGGTGCGGACCAGCACCTATCGCGCGTCTTTGCTCCAAAACGAGGCC GTTGTTCGGGGCAAGACAGTGTTGGATGTGGGATGCGGCACGGGAATCCT ATCCATCTTCGCCTCCAAAGCGGGTGCAGCTCGCGTTGTCGGCATAGATA ACTCGGACATTGTGTACACCGCCATGGATATCATCAGGAAGAACAAGGTT GAGAATGTTGAACTGATCAAGGGACGGCTGGAGGACACAGATCTCCCAGA GACTAAATACGACATTATAATATCCGAATGGATGGGCTATTTTCTTTTGT ACGAATCAATGCTGGACAGCATTATCTACGCCCGCGAGAATCACCTCAAC CCCAATGGCATAATACTGCCCAGTCGCTGTACACTCAGTCTCTTGGGCTA TGGAGACGACACGCTTTATGCCGATGAAGTGGAATTCTGGTCTAACGTTT ACGAGGTCGACATGAGCGATCTGCGAAAGCAATCAATAGAGGAGCCACTC ATGCAGGTGGTGGATGCAGAGTTCATGCTGACGGAACCCGAACAGATAGC TAACTTCGACATAATGACCGTCGATATGAACTATCCAAACTTTACTCACC AGTTTAGCTTAAAGGTCACGAAGCCGGGACGATTATCCGCCTTTGTCGGT TACTTTGAAACATTGTTTGAACTACCCTCCCCCGTCATGTTCAGCACATC ACCATCTGCGACGCCCACCCATTGGAAGCAAACGGTTTTCTTCATCGAGA ACCCGCAGGTTGTGAAGGAAGGAGACGTCATTTGTGGGAAAATCACGTCA AGAAGACATAAAGAGGATGTCAGAGGACTTAGTGTGGACATAGAAGTCTT TGGCAAGAAACACAAATACAATGTGGTTTAATGTGCTTCTTTTTGAATAG AATTAAATAAAATACGCTTGAAGATCTAAGTTGGTATTTAATTTCAAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Art3-RB | 1835 | Art3-RB | 59..1835 | 1..1777 | 8885 | 100 | Plus |
Art3-RA | 1911 | Art3-RA | 283..1883 | 202..1802 | 8005 | 100 | Plus |
Art3.a | 1782 | Art3.a | 188..1782 | 201..1795 | 7975 | 100 | Plus |
Art3-RA | 1911 | Art3-RA | 146..283 | 1..138 | 690 | 100 | Plus |
Art3.a | 1782 | Art3.a | 59..189 | 1..131 | 655 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 11052217..11054011 | 1795..1 | 8945 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 15227580..15229381 | 1802..1 | 9010 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 14968411..14970212 | 1802..1 | 9010 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11052217..11054011 | 1..1795 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Art3-RA | 22..1551 | 202..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Art3-RA | 22..1551 | 202..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Art3-RA | 22..1551 | 202..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Art3-RA | 22..1551 | 202..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Art3-RA | 22..1551 | 202..1731 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Art3-RB | 59..1837 | 1..1779 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Art3-RB | 59..1835 | 1..1777 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Art3-RB | 28..1804 | 1..1777 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Art3-RB | 59..1837 | 1..1779 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Art3-RB | 28..1804 | 1..1777 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15227587..15229381 | 1..1795 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15227587..15229381 | 1..1795 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15227587..15229381 | 1..1795 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11053309..11055103 | 1..1795 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14968418..14970212 | 1..1795 | 100 | Minus |
Translation from 306 to 1730
> SD23052.pep MDEGDELTTCLFCTETSANISVAIDHLDARHKVNLSQLQRKFEMDQYSFI KLINYIRAKKISAEQLLSAEHPLWQDEKYLQPGEYEPWLCYDYEVLKTDG APTQPSVLELQQRIAEQSQLLQQANEDMERMRNDYKALLQKVHADGEPKG SDQSVPRNNVCLDNEYFKSYAHFGIHHEMLSDKVRTSTYRASLLQNEAVV RGKTVLDVGCGTGILSIFASKAGAARVVGIDNSDIVYTAMDIIRKNKVEN VELIKGRLEDTDLPETKYDIIISEWMGYFLLYESMLDSIIYARENHLNPN GIILPSRCTLSLLGYGDDTLYADEVEFWSNVYEVDMSDLRKQSIEEPLMQ VVDAEFMLTEPEQIANFDIMTVDMNYPNFTHQFSLKVTKPGRLSAFVGYF ETLFELPSPVMFSTSPSATPTHWKQTVFFIENPQVVKEGDVICGKITSRR HKEDVRGLSVDIEVFGKKHKYNVV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11802-PA | 520 | GF11802-PA | 54..520 | 8..474 | 2020 | 77.9 | Plus |
Dana\GF17088-PA | 372 | GF17088-PA | 52..354 | 166..464 | 659 | 43.2 | Plus |
Dana\GF18899-PA | 348 | GF18899-PA | 25..330 | 164..464 | 527 | 37.5 | Plus |
Dana\GF14882-PA | 369 | GF14882-PA | 2..343 | 120..462 | 481 | 34.3 | Plus |
Dana\GF14044-PA | 343 | GF14044-PA | 4..310 | 164..463 | 462 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20792-PA | 517 | GG20792-PA | 51..517 | 8..474 | 2326 | 91.2 | Plus |
Dere\GG17264-PA | 397 | GG17264-PA | 52..379 | 140..464 | 646 | 40.4 | Plus |
Dere\GG17013-PA | 345 | GG17013-PA | 20..326 | 163..464 | 559 | 39.8 | Plus |
Dere\GG24386-PA | 355 | GG24386-PA | 33..332 | 166..465 | 474 | 35.4 | Plus |
Dere\GG10333-PA | 341 | GG10333-PA | 1..310 | 162..465 | 418 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18753-PA | 507 | GH18753-PA | 39..506 | 8..473 | 1776 | 70.6 | Plus |
Dgri\GH19565-PA | 382 | GH19565-PA | 62..367 | 166..467 | 659 | 43.5 | Plus |
Dgri\GH13621-PA | 342 | GH13621-PA | 2..311 | 164..465 | 432 | 33.5 | Plus |
Dgri\GH16647-PA | 336 | GH16647-PA | 20..312 | 168..463 | 410 | 33 | Plus |
Dgri\GH14177-PA | 544 | GH14177-PA | 151..462 | 164..466 | 405 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Art3-PB | 474 | CG6563-PB | 1..474 | 1..474 | 2474 | 100 | Plus |
Art3-PA | 516 | CG6563-PA | 43..516 | 1..474 | 2474 | 100 | Plus |
Art1-PA | 376 | CG6554-PA | 31..358 | 140..464 | 636 | 40.4 | Plus |
Art6-PA | 341 | CG9927-PA | 16..322 | 163..464 | 521 | 38.5 | Plus |
Art2-PB | 355 | CG3675-PB | 30..331 | 163..464 | 467 | 35.2 | Plus |
Art2-PA | 355 | CG3675-PA | 30..331 | 163..464 | 467 | 35.2 | Plus |
Art8-PA | 341 | CG16840-PA | 3..309 | 164..464 | 405 | 33.9 | Plus |
Art4-PB | 530 | CG5358-PB | 142..453 | 164..466 | 392 | 31.6 | Plus |
Art4-PA | 530 | CG5358-PA | 142..453 | 164..466 | 392 | 31.6 | Plus |
CG32152-PC | 357 | CG32152-PC | 12..320 | 171..474 | 334 | 27.4 | Plus |
CG32152-PB | 357 | CG32152-PB | 12..320 | 171..474 | 334 | 27.4 | Plus |
Art9-PA | 313 | CG9929-PA | 15..287 | 179..446 | 303 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24669-PA | 431 | GI24669-PA | 1..430 | 44..473 | 1599 | 66.8 | Plus |
Dmoj\GI23860-PA | 387 | GI23860-PA | 50..369 | 144..464 | 664 | 42 | Plus |
Dmoj\GI20553-PA | 341 | GI20553-PA | 2..310 | 164..465 | 453 | 34 | Plus |
Dmoj\GI11605-PA | 338 | GI11605-PA | 23..312 | 169..463 | 409 | 31.6 | Plus |
Dmoj\GI12675-PA | 632 | GI12675-PA | 316..596 | 189..466 | 408 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12077-PA | 514 | GL12077-PA | 48..513 | 8..473 | 1851 | 73.7 | Plus |
Dper\GL12503-PA | 235 | GL12503-PA | 13..234 | 219..473 | 853 | 64.7 | Plus |
Dper\GL21930-PA | 392 | GL21930-PA | 41..377 | 138..467 | 650 | 39.8 | Plus |
Dper\GL23322-PA | 351 | GL23322-PA | 11..336 | 150..470 | 518 | 34.6 | Plus |
Dper\GL16439-PA | 366 | GL16439-PA | 37..338 | 166..462 | 494 | 34.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19687-PB | 481 | GA19687-PB | 9..480 | 2..473 | 1862 | 73.2 | Plus |
Dpse\GA19687-PA | 514 | GA19687-PA | 48..513 | 8..473 | 1846 | 73.5 | Plus |
Dpse\GA19682-PA | 392 | GA19682-PA | 41..377 | 138..467 | 650 | 39.8 | Plus |
Dpse\GA27221-PA | 351 | GA27221-PA | 14..336 | 153..470 | 509 | 34.8 | Plus |
Dpse\GA17605-PA | 366 | GA17605-PA | 37..338 | 166..462 | 493 | 34.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25795-PA | 516 | GM25795-PA | 50..516 | 8..474 | 2415 | 94.4 | Plus |
Dsec\GM26148-PA | 397 | GM26148-PA | 52..379 | 140..464 | 635 | 39.8 | Plus |
Dsec\GM25897-PA | 444 | GM25897-PA | 119..434 | 163..473 | 537 | 38.1 | Plus |
Dsec\GM18100-PA | 355 | GM18100-PA | 33..331 | 166..464 | 475 | 36.2 | Plus |
Dsec\GM11203-PA | 341 | GM11203-PA | 1..310 | 162..465 | 417 | 33.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20372-PA | 477 | GD20372-PA | 50..477 | 8..474 | 2185 | 87.4 | Plus |
Dsim\GD20702-PA | 397 | GD20702-PA | 52..379 | 140..464 | 646 | 40.4 | Plus |
Dsim\GD20467-PA | 341 | GD20467-PA | 16..331 | 163..473 | 536 | 38.1 | Plus |
Dsim\GD22717-PA | 355 | GD22717-PA | 33..331 | 166..464 | 480 | 36.5 | Plus |
Dsim\GD22203-PA | 325 | GD22203-PA | 1..301 | 162..456 | 413 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24043-PA | 508 | GJ24043-PA | 33..507 | 2..473 | 1790 | 69.4 | Plus |
Dvir\GJ10573-PA | 381 | GJ10573-PA | 41..363 | 146..464 | 660 | 41.8 | Plus |
Dvir\GJ13894-PA | 341 | GJ13894-PA | 2..310 | 164..465 | 445 | 33.7 | Plus |
Dvir\GJ11284-PA | 311 | GJ11284-PA | 1..285 | 180..463 | 405 | 32.2 | Plus |
Dvir\GJ24202-PA | 538 | GJ24202-PA | 149..460 | 164..466 | 404 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12781-PA | 517 | GK12781-PA | 38..516 | 1..473 | 1706 | 65.1 | Plus |
Dwil\GK13389-PA | 382 | GK13389-PA | 3..364 | 106..464 | 680 | 40.1 | Plus |
Dwil\GK24448-PA | 383 | GK24448-PA | 51..357 | 163..464 | 546 | 36.8 | Plus |
Dwil\GK22483-PA | 344 | GK22483-PA | 16..301 | 165..444 | 490 | 35.9 | Plus |
Dwil\GK14886-PA | 340 | GK14886-PA | 1..310 | 162..465 | 439 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26400-PA | 516 | GE26400-PA | 50..516 | 8..474 | 2346 | 91.6 | Plus |
Dyak\GE24666-PA | 378 | GE24666-PA | 36..360 | 149..464 | 648 | 41.2 | Plus |
Dyak\GE24405-PA | 345 | GE24405-PA | 20..326 | 163..464 | 549 | 39.5 | Plus |
Dyak\GE14754-PA | 355 | GE14754-PA | 33..331 | 166..464 | 443 | 34.9 | Plus |
Dyak\GE13077-PA | 341 | GE13077-PA | 1..310 | 162..465 | 424 | 33.8 | Plus |
Translation from 306 to 1730
> SD23052.hyp MDEGDELTTCLFCTETSANISVAIDHLDARHKVNLSQLQRKFEMDQYSFI KLINYIRAKKISAEQLLSAEHPLWQDEKYLQPGEYEPWLCYDYEVLKTDG APTQPSVLELQQRIAEQSQLLQQANEDMERMRNDYKALLQKVHADGEPKG SDQSVPRNNVCLDNEYFKSYAHFGIHHEMLSDKVRTSTYRASLLQNEAVV RGKTVLDVGCGTGILSIFASKAGAARVVGIDNSDIVYTAMDIIRKNKVEN VELIKGRLEDTDLPETKYDIIISEWMGYFLLYESMLDSIIYARENHLNPN GIILPSRCTLSLLGYGDDTLYADEVEFWSNVYEVDMSDLRKQSIEEPLMQ VVDAEFMLTEPEQIANFDIMTVDMNYPNFTHQFSLKVTKPGRLSAFVGYF ETLFELPSPVMFSTSPSATPTHWKQTVFFIENPQVVKEGDVICGKITSRR HKEDVRGLSVDIEVFGKKHKYNVV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Art3-PB | 474 | CG6563-PB | 1..474 | 1..474 | 2474 | 100 | Plus |
Art3-PA | 516 | CG6563-PA | 43..516 | 1..474 | 2474 | 100 | Plus |
Art1-PA | 376 | CG6554-PA | 31..358 | 140..464 | 636 | 40.4 | Plus |
Art6-PA | 341 | CG9927-PA | 16..322 | 163..464 | 521 | 38.5 | Plus |
Art2-PB | 355 | CG3675-PB | 30..331 | 163..464 | 467 | 35.2 | Plus |