BDGP Sequence Production Resources |
Search the DGRC for SD23424
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 234 |
Well: | 24 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5044-RB |
Protein status: | SD23424.pep: gold |
Sequenced Size: | 1676 |
Gene | Date | Evidence |
---|---|---|
CG5044-RB | 2010-11-11 | Gleaning Pick By Joe Carlson |
1676 bp assembled on 2011-03-25
GenBank Submission: BT126275.1
> SD23424.complete ACACAACATTACTGACGACAGCCGCTCAAAATGCAGGGCCCAATTCAAAG GTTGGTGTACACATTTGGTCATCGCACCTGTAGCCAATTGCCGATGATCG GCGGAGCAACGATATCCCAAACAAAACCAACAACAATGGCTCTCTCCGTT CGCCAATCCTCCTCCTCCGTGCTGGCCACGGAGTCCTCTAACAAGGGAAT GATTATTCTGAACCGGCCCAAGGCGCTTAACGCCATCAACTTGGAGATGG TACGCAAGATCTACAAGCACCTGAAGAAGTGCGAGAAGTCCAAGTCGCTG GTGATCATCAAGGGCACAGGTGACAAGGCCTTCTGCGCCGGTGGAGATGT GCGCGCTCTGGTCGAGGCTGGCCCTACGGATGAGTCGAAGAGCTTCTTCC GGGAGGAGTACAGCACGAATGCCCTGATCGGAAACTATAAGATTCCCTAC ATCGCCATCATTGACGGTATTACCATGGGCGGTGGCGTGGGTCTGAGTGT GCATGGCAAGTACCGGGTGGCCAGCGATCGGACACTGTTCGCCATGCCCG AGACGGCGATTGGCCTCTTCCCGGATGTGGGTGGATCATACTTCCTGCCT CGACTGCAGGGAAAGCTGGGCCTCTATCTGGGTCTCACAGGATATCGACT GCGCGGAGCCGATGTCTATTACTCAGGCATTGCTACGCACTACTGCGAGA GCAGCAAGATCCCTGATCTGGAGACGGCTCTCCTTAACTGCCCGGATGCG GATGATGTTCCTGAGCTGCTGCAGAAGTACCATTCCCCGCCAGAAAAGCC CTTCTCGCTGCAGCCTGTCCTGGAGCAGATCAACAAGAATTTTTCAGCGG ACTCGGTGGAGGGGATTCTAGAGAATCTGCAGAACGATGGCAGTGAATGG GCCAAGAAGACGCTTGAGACGCTCTCGAAGATGTCTCCCACCTCGATGAA GGTTACGTTCCGTCAGTTGGAGCTCGGATCACAGCTGTCGCTGGCTCAGT GTCTTATTATGGAATATCGTCTGGCCGTGCGTCATCTGGAGCGAAGTGAT TTCAAGGAGGGAGTGCGCGCCCTACTCATCGACAAGGATCAGAAGCCCCA GTGGCAGCCAACCAAGCTGGCCGATGTTACTGAGGAACATGTGCAGTGGT TTTTCCGCAAGCTGCCGGACACCGAGGAACTCAAGCTGTAATGTAGCAAG CTTAGTTTTGTTTTTGTTTGAGCCTTGGCATCCAATCCTGTTTGTCTTCC GTTGAGCCGCTCATTCTTATATGCACACAACTTAATATCTTTGTATATAT CATTGCAAGCTTGAGTTATGTTATGCATGGTTCCTTGCCTGCCGTTTTGC AATATTCTTTATATATCTTTAGCGTTCTGTGGCCACAGTTTGATGAGTTC TGTCGGCTAATTTTCCGCAATCTCTTCTCTGTTTCATTCCAACAGCGAAT AACTACGAGGAAGAATCCTATTCGCCGGTATTTACCAATAACGATTGTGA AATTCAATGCATTTAAATATATGATATACATATATGCCTATCTATATATA TTATATACAATTCGTAGTCCTAATACAATCAATAATTGTGCCTAAAGAAT CGTTAGAATTCGTTTACCAAGAATAAAAAGAAGTGTATACGTTTAATAAA AAAAAACAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 15098220..15099105 | 33..918 | 4400 | 99.7 | Plus |
3R | 31820162 | 3R | 15099368..15100096 | 917..1649 | 3520 | 98.9 | Plus |
3R | 31820162 | 3R | 15098119..15098151 | 1..33 | 165 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 596..682 | 1566..1652 | 119 | 62.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11181923..11181955 | 1..33 | 100 | -> | Plus |
chr3R | 11182025..11182909 | 34..918 | 99 | -> | Plus |
chr3R | 11183174..11183900 | 919..1649 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5044-RB | 1..1161 | 31..1191 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5044-RB | 1..1161 | 31..1191 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5044-RB | 1..1161 | 31..1191 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5044-RB | 44..1683 | 1..1644 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5044-RB | 60..1702 | 1..1647 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5044-RB | 60..1702 | 1..1647 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15357288..15357320 | 1..33 | 100 | -> | Plus |
3R | 15357390..15358274 | 34..918 | 99 | -> | Plus |
3R | 15358539..15359265 | 919..1649 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15357288..15357320 | 1..33 | 100 | -> | Plus |
3R | 15357390..15358274 | 34..918 | 99 | -> | Plus |
3R | 15358539..15359265 | 919..1649 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15357288..15357320 | 1..33 | 100 | -> | Plus |
3R | 15357390..15358274 | 34..918 | 99 | -> | Plus |
3R | 15358539..15359265 | 919..1649 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11183010..11183042 | 1..33 | 100 | -> | Plus |
arm_3R | 11183112..11183996 | 34..918 | 99 | -> | Plus |
arm_3R | 11184261..11184987 | 919..1649 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15098221..15099105 | 34..918 | 99 | -> | Plus |
3R | 15099370..15100096 | 919..1649 | 98 | Plus | |
3R | 15098119..15098151 | 1..33 | 100 | -> | Plus |
Translation from 30 to 1190
> SD23424.pep MQGPIQRLVYTFGHRTCSQLPMIGGATISQTKPTTMALSVRQSSSSVLAT ESSNKGMIILNRPKALNAINLEMVRKIYKHLKKCEKSKSLVIIKGTGDKA FCAGGDVRALVEAGPTDESKSFFREEYSTNALIGNYKIPYIAIIDGITMG GGVGLSVHGKYRVASDRTLFAMPETAIGLFPDVGGSYFLPRLQGKLGLYL GLTGYRLRGADVYYSGIATHYCESSKIPDLETALLNCPDADDVPELLQKY HSPPEKPFSLQPVLEQINKNFSADSVEGILENLQNDGSEWAKKTLETLSK MSPTSMKVTFRQLELGSQLSLAQCLIMEYRLAVRHLERSDFKEGVRALLI DKDQKPQWQPTKLADVTEEHVQWFFRKLPDTEELKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23000-PA | 351 | GF23000-PA | 1..351 | 36..386 | 1788 | 94 | Plus |
Dana\GF11161-PA | 293 | GF11161-PA | 43..230 | 48..229 | 204 | 29.8 | Plus |
Dana\GF11465-PA | 299 | GF11465-PA | 43..225 | 51..229 | 172 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16921-PA | 385 | GG16921-PA | 2..385 | 3..386 | 2004 | 97.1 | Plus |
Dere\GG22466-PA | 294 | GG22466-PA | 25..214 | 38..219 | 207 | 31.1 | Plus |
Dere\GG22562-PA | 299 | GG22562-PA | 51..225 | 57..229 | 174 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16630-PA | 354 | GH16630-PA | 6..354 | 39..386 | 1656 | 87.1 | Plus |
Dgri\GH20865-PA | 293 | GH20865-PA | 46..213 | 51..219 | 186 | 31 | Plus |
Dgri\GH22640-PA | 298 | GH22640-PA | 53..224 | 60..229 | 170 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5044-PB | 386 | CG5044-PB | 1..386 | 1..386 | 1991 | 100 | Plus |
CG5044-PA | 385 | CG5044-PA | 2..385 | 3..386 | 1981 | 100 | Plus |
Echs1-PA | 295 | CG6543-PA | 45..215 | 48..219 | 205 | 31.6 | Plus |
Echs1-PB | 295 | CG6543-PB | 45..215 | 48..219 | 205 | 31.6 | Plus |
CG8778-PA | 299 | CG8778-PA | 51..225 | 57..229 | 174 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22035-PA | 354 | GI22035-PA | 3..354 | 36..386 | 1664 | 87.8 | Plus |
Dmoj\GI20973-PA | 293 | GI20973-PA | 5..213 | 18..219 | 187 | 27.9 | Plus |
Dmoj\GI21154-PA | 301 | GI21154-PA | 56..227 | 60..229 | 173 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13727-PA | 394 | GL13727-PA | 1..394 | 1..386 | 1795 | 87.8 | Plus |
Dper\GL16995-PA | 296 | GL16995-PA | 58..216 | 50..219 | 148 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18617-PA | 394 | GA18617-PA | 1..394 | 1..386 | 1795 | 87.8 | Plus |
Dpse\GA19673-PB | 296 | GA19673-PB | 49..216 | 51..219 | 207 | 32.2 | Plus |
Dpse\GA19673-PA | 296 | GA19673-PA | 49..216 | 51..219 | 207 | 32.2 | Plus |
Dpse\GA21314-PA | 298 | GA21314-PA | 42..224 | 51..229 | 166 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24227-PA | 351 | GM24227-PA | 1..351 | 36..386 | 1843 | 98.3 | Plus |
Dsec\GM20252-PA | 294 | GM20252-PA | 25..214 | 38..219 | 201 | 30.6 | Plus |
Dsec\GM20345-PA | 233 | GM20345-PA | 2..159 | 71..229 | 151 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19018-PA | 351 | GD19018-PA | 1..351 | 36..386 | 1852 | 98.9 | Plus |
Dsim\GD25738-PA | 294 | GD25738-PA | 25..214 | 38..219 | 201 | 30.6 | Plus |
Dsim\GD25824-PA | 299 | GD25824-PA | 51..225 | 57..229 | 172 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10482-PA | 354 | GJ10482-PA | 3..354 | 36..386 | 1668 | 87.8 | Plus |
Dvir\GJ20693-PA | 293 | GJ20693-PA | 46..213 | 51..219 | 184 | 30.5 | Plus |
Dvir\GJ21004-PA | 281 | GJ21004-PA | 25..207 | 51..229 | 178 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11777-PA | 351 | GK11777-PA | 1..351 | 36..386 | 1734 | 90.3 | Plus |
Dwil\GK17937-PA | 295 | GK17937-PA | 48..215 | 51..219 | 206 | 32.2 | Plus |
Dwil\GK15915-PA | 302 | GK15915-PA | 46..228 | 51..229 | 184 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24304-PA | 351 | GE24304-PA | 1..351 | 36..386 | 1855 | 98.9 | Plus |
Dyak\GE13337-PA | 294 | GE13337-PA | 25..214 | 38..219 | 211 | 31.6 | Plus |
Dyak\GE13432-PA | 299 | GE13432-PA | 51..225 | 57..229 | 179 | 29 | Plus |
Translation from 30 to 1190
> SD23424.hyp MQGPIQRLVYTFGHRTCSQLPMIGGATISQTKPTTMALSVRQSSSSVLAT ESSNKGMIILNRPKALNAINLEMVRKIYKHLKKCEKSKSLVIIKGTGDKA FCAGGDVRALVEAGPTDESKSFFREEYSTNALIGNYKIPYIAIIDGITMG GGVGLSVHGKYRVASDRTLFAMPETAIGLFPDVGGSYFLPRLQGKLGLYL GLTGYRLRGADVYYSGIATHYCESSKIPDLETALLNCPDADDVPELLQKY HSPPEKPFSLQPVLEQINKNFSADSVEGILENLQNDGSEWAKKTLETLSK MSPTSMKVTFRQLELGSQLSLAQCLIMEYRLAVRHLERSDFKEGVRALLI DKDQKPQWQPTKLADVTEEHVQWFFRKLPDTEELKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5044-PB | 386 | CG5044-PB | 1..386 | 1..386 | 1991 | 100 | Plus |
CG5044-PA | 385 | CG5044-PA | 2..385 | 3..386 | 1981 | 100 | Plus |
CG6543-PA | 295 | CG6543-PA | 45..215 | 48..219 | 205 | 31.6 | Plus |
CG6543-PB | 295 | CG6543-PB | 45..215 | 48..219 | 205 | 31.6 | Plus |
CG8778-PA | 299 | CG8778-PA | 51..225 | 57..229 | 174 | 28.4 | Plus |