SD23574.complete Sequence
806 bp assembled on 2011-03-18
GenBank Submission: BT126233.1
> SD23574.complete
CTCCACGCCAACGGAACGCTCGAGCAGCCAGCGGCAGGCAGTAGCAGCAG
CAGTGCAGAGCGCAATATATAGAACATTTGAGAGAAAAGAAATAAAAGGA
GCCAAGTCAGACGGGGCCCCCAGCGGTGGTAGTAGAAGTACGGAAAAGCA
CGCGCGTCATCGTAAAAAACGTGCTACGAAATCGCAGGGAGACGGGCGGT
AATAGCAAATAAATTACATAAAAACCACGGAGGAGCAATCACAGCATAAG
AATGACCGATACCAGTGCAAATAATTTGGATGTATCGGTGGATGTGGTCT
GGCCGACGATAATTGTCCTGGCCATGCTGGTCATAAATGGCTTCGTTTTC
GCCTACATTATGCGCAAGCGGCGGGAATACAAATGCCAGGAGGAGGAGCT
GCAGCAACAACAACAACCTGTTCCACATTCCTCCTATGCGGCCACTTCGA
CAACGGAACGGCATGCGGATGCGGATCAGGAGGACGATAGCTGTGCCATC
GAGATGGAGCGACTGTAGGGATGGAGATCGCACTAGCTAAGCTCTCTGAT
ACTCAACTACTATCGTCCAAGCTTCTCAACTGCAACGAAGTTTCCTAAGC
CACATATGTAGTATATCTAGATTGATAGATACAAAACGTATACGTCGAGT
GCCTGGATATCACATCGGATCGCACGTGCATTTAATTACGGTGTTTTTAA
GTTGTTAACTCTATCTGCATATATCGCAAATTCAAATTTTCTACAAAAGT
ATACAATAAATGTGTGAATTTTATCATGCGGCAACGAGAAAAAAAAAAAA
AAAAAA
SD23574.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:33:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 9851992..9852779 | 1..788 | 3925 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:33:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 13964668..13965457 | 1..790 | 3950 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:09:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 13965867..13966656 | 1..790 | 3950 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 22:33:16 has no hits.
SD23574.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:34:03 Download gff for
SD23574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 9851992..9852779 | 1..788 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-22 17:53:23 Download gff for
SD23574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42806-RB | 1..267 | 252..518 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:57:50 Download gff for
SD23574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42806-RB | 1..267 | 252..518 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:30:08 Download gff for
SD23574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42806-RB | 1..267 | 252..518 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-22 17:53:22 Download gff for
SD23574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42806-RB | 1..707 | 1..707 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:57:50 Download gff for
SD23574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42806-RB | 16..803 | 1..788 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:30:08 Download gff for
SD23574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42806-RB | 16..803 | 1..788 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:34:03 Download gff for
SD23574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13964668..13965455 | 1..788 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:34:03 Download gff for
SD23574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13964668..13965455 | 1..788 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:34:03 Download gff for
SD23574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13964668..13965455 | 1..788 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:57:50 Download gff for
SD23574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 9852173..9852960 | 1..788 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:02:09 Download gff for
SD23574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13965867..13966654 | 1..788 | 100 | | Plus |
SD23574.hyp Sequence
Translation from 251 to 517
> SD23574.hyp
MTDTSANNLDVSVDVVWPTIIVLAMLVINGFVFAYIMRKRREYKCQEEEL
QQQQQPVPHSSYAATSTTERHADADQEDDSCAIEMERL*
SD23574.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:11:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42806-PB | 88 | CG42806-PB | 1..88 | 1..88 | 453 | 100 | Plus |
SD23574.pep Sequence
Translation from 251 to 517
> SD23574.pep
MTDTSANNLDVSVDVVWPTIIVLAMLVINGFVFAYIMRKRREYKCQEEEL
QQQQQPVPHSSYAATSTTERHADADQEDDSCAIEMERL*
SD23574.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:54:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42806-PB | 88 | CG42806-PB | 1..88 | 1..88 | 453 | 100 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:25:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA30444-PB | 61 | GA30444-PB | 1..44 | 1..44 | 162 | 68.2 | Plus |