BDGP Sequence Production Resources |
Search the DGRC for SD24341
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 243 |
Well: | 41 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1354-RB |
Protein status: | SD24341.pep: gold |
Sequenced Size: | 1298 |
Gene | Date | Evidence |
---|---|---|
CG1354-RB | 2009-06-22 | Replacement based on scoring |
1298 bp assembled on 2009-09-30
GenBank Submission: BT099912.1
> SD24341.complete CTCGTGCCGAATTCGGCACGAGCTTTTCATCTGCTCCTGCTGATGCTGCC GCCGATGGCTTTTGCCTTACCCACACGTCGTGTTCCGGTGCCCGATGAGC GTTTCGATTACCTGGTGGAGTACCACAAGCCGGCCAGTGTGGTTCCTGCC TATTTGAACGTCGTGGACATTGCTGGCTTGGTGAAGGGAGCCGCCGAGGG TCAGGGACTTGGAAACGACTTCCTTTCGCACATCAGCGCCTGCGATGCCA TTTTCCACTTGTGCCGCGCCTTCGAGGATCCGGATGTGACCCACGTGGAG GGCGAGGTGGATCCGGTGCGCGATCTGGAGATCATCTCCGAGGAGCTGCG CCTCAAGGACGAGGAGAATCTGCTCAAGAACTTGGACAAACTGGAGAAGG TGGTGGCCCGCGGCGGCGACAAGAAGCTCAAGCCCGAATACGATTCGATG CTTAAGATTAAGGATATCCTTATCGATCAGAAGCGTCATCTGCGCTTCGA GGACTGGAATGCCCATGATATTGAGGCCTTGAACAAGTATCTGTTCCTGA CCTCCAAACCGGTCATCTACCTGGTGAACCTTTCGGACAAGGACTTCATC CGCAAGAAGAACAAGTGGCTGCCGAAGATCAAGGAATGGATCGACAAGAA CGATCCCGGAGCACTGCTCATTCCCTTCTCCGGCGCCTTCGAGCACCAGC TGACCGAAAAGGACGAACTGGAGCGCAAGGCCTACGAGACGGAGACCAAG TGCAAAAGTATGCTGGAGAAGATCGTTGTGACCGGCTACAAGGGCCTGCA GCTGGAGTACTTCTTCACCGCCGGGCCGGATGAAGTGAAGGCATGGACCA TCCAGAAGGGCACCAAGGCTCCCCAAGCCGCCGGACGCATTCACACCGAC TTCGAGAAGGGCTTCATTATGGCCGAGGTGATGCACTTCGAGGACTTCAA GGCGGAGGGCAGTGAGGCGAATGCCAAGGCCGCTGGCAAATATCGCCAAC AGGGACGCAACTACACCGTCGAGGATGGCGACATCATATTCTTTAAGTTC AACGCCGGCGCTGGCCTCAAGGATGCCAAGAAGAAATGATACCGTTTGGC CATGATCATCGCCATGTCCACCGTTTTGTACATTAACTTGATCTTGTACT CCCAGATGTTTCGCTTCGCCAGAGGCTAGCTCCTCATTATCACATCCCTC ACTCTCATGTTCGAGGCCTGAAAATGCATTTTGAATTTCCTTTTTTTTTT GTACGCTATGTAAACACGCTTATGACACACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 9672919..9673678 | 520..1280 | 3755 | 99.9 | Plus |
chrX | 22417052 | chrX | 9672269..9672652 | 136..519 | 1920 | 100 | Plus |
chrX | 22417052 | chrX | 9671948..9672062 | 23..137 | 575 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 9671948..9672062 | 23..137 | 100 | -> | Plus |
chrX | 9672271..9672652 | 138..519 | 100 | -> | Plus |
chrX | 9672919..9673678 | 520..1280 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1354-RB | 1..1047 | 43..1089 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1354-RB | 1..1047 | 43..1089 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1354-RB | 1..1047 | 43..1089 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1354-RB | 1..1047 | 43..1089 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1354-RB | 1..1257 | 23..1280 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1354-RB | 1..1257 | 23..1280 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1354-RB | 1..1257 | 23..1280 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1354-RB | 1..1257 | 23..1280 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9780187..9780301 | 23..137 | 100 | -> | Plus |
X | 9780511..9780892 | 138..519 | 99 | -> | Plus |
X | 9781159..9781918 | 520..1280 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9780187..9780301 | 23..137 | 100 | -> | Plus |
X | 9780511..9780892 | 138..519 | 99 | -> | Plus |
X | 9781159..9781918 | 520..1280 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9780187..9780301 | 23..137 | 100 | -> | Plus |
X | 9780511..9780892 | 138..519 | 99 | -> | Plus |
X | 9781159..9781918 | 520..1280 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 9674220..9674334 | 23..137 | 100 | -> | Plus |
arm_X | 9674544..9674925 | 138..519 | 99 | -> | Plus |
arm_X | 9675192..9675951 | 520..1280 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9788609..9788990 | 138..519 | 99 | -> | Plus |
X | 9789257..9790016 | 520..1280 | 99 | Plus | |
X | 9788285..9788399 | 23..137 | 100 | -> | Plus |
Translation from 0 to 1088
> SD24341.pep LVPNSARAFHLLLLMLPPMAFALPTRRVPVPDERFDYLVEYHKPASVVPA YLNVVDIAGLVKGAAEGQGLGNDFLSHISACDAIFHLCRAFEDPDVTHVE GEVDPVRDLEIISEELRLKDEENLLKNLDKLEKVVARGGDKKLKPEYDSM LKIKDILIDQKRHLRFEDWNAHDIEALNKYLFLTSKPVIYLVNLSDKDFI RKKNKWLPKIKEWIDKNDPGALLIPFSGAFEHQLTEKDELERKAYETETK CKSMLEKIVVTGYKGLQLEYFFTAGPDEVKAWTIQKGTKAPQAAGRIHTD FEKGFIMAEVMHFEDFKAEGSEANAKAAGKYRQQGRNYTVEDGDIIFFKF NAGAGLKDAKKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25119-PA | 397 | GF25119-PA | 29..397 | 2..362 | 1671 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18324-PA | 397 | GG18324-PA | 29..397 | 2..362 | 1767 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11803-PA | 397 | GH11803-PA | 29..397 | 2..362 | 1676 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1354-PB | 348 | CG1354-PB | 1..348 | 15..362 | 1824 | 100 | Plus |
CG1354-PE | 397 | CG1354-PE | 62..397 | 27..362 | 1761 | 100 | Plus |
CG1354-PA | 397 | CG1354-PA | 62..397 | 27..362 | 1761 | 100 | Plus |
CG1354-PD | 397 | CG1354-PD | 62..397 | 27..362 | 1761 | 100 | Plus |
CG1354-PC | 397 | CG1354-PC | 62..397 | 27..362 | 1761 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15984-PA | 397 | GI15984-PA | 29..397 | 2..362 | 1690 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16374-PA | 397 | GL16374-PA | 62..397 | 27..362 | 1684 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12352-PA | 397 | GA12352-PA | 62..397 | 27..362 | 1706 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11387-PA | 397 | GM11387-PA | 29..397 | 2..362 | 1768 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24779-PA | 383 | GD24779-PA | 62..378 | 27..343 | 1674 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18714-PA | 397 | GJ18714-PA | 29..397 | 2..362 | 1677 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25358-PA | 397 | GK25358-PA | 29..397 | 2..362 | 1692 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17809-PA | 432 | GE17809-PA | 74..432 | 8..362 | 1823 | 96.9 | Plus |
Translation from 24 to 1088
> SD24341.hyp FHLLLLMLPPMAFALPTRRVPVPDERFDYLVEYHKPASVVPAYLNVVDIA GLVKGAAEGQGLGNDFLSHISACDAIFHLCRAFEDPDVTHVEGEVDPVRD LEIISEELRLKDEENLLKNLDKLEKVVARGGDKKLKPEYDSMLKIKDILI DQKRHLRFEDWNAHDIEALNKYLFLTSKPVIYLVNLSDKDFIRKKNKWLP KIKEWIDKNDPGALLIPFSGAFEHQLTEKDELERKAYETETKCKSMLEKI VVTGYKGLQLEYFFTAGPDEVKAWTIQKGTKAPQAAGRIHTDFEKGFIMA EVMHFEDFKAEGSEANAKAAGKYRQQGRNYTVEDGDIIFFKFNAGAGLKD AKKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1354-PB | 348 | CG1354-PB | 1..348 | 7..354 | 1824 | 100 | Plus |
CG1354-PE | 397 | CG1354-PE | 62..397 | 19..354 | 1761 | 100 | Plus |
CG1354-PA | 397 | CG1354-PA | 62..397 | 19..354 | 1761 | 100 | Plus |
CG1354-PD | 397 | CG1354-PD | 62..397 | 19..354 | 1761 | 100 | Plus |
CG1354-PC | 397 | CG1354-PC | 62..397 | 19..354 | 1761 | 100 | Plus |