Clone SD25477 Report

Search the DGRC for SD25477

Clone and Library Details

Library:SD
Tissue Source:Drosophila melanogaster Schneider L2 cell culture
Created by:Ling Hong
Date Registered:1999-02-25
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:254
Well:77
Vector:pOT2
Associated Gene/TranscriptCG31786-RB
Protein status:SD25477.pep: validated not full length
Preliminary Size:1437
Sequenced Size:1846

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31786 2003-01-01 Sim4 clustering to Release 3
CG31786 2003-02-13 Blastp of sequenced clone
CG31786 2008-04-29 Release 5.5 accounting
CG31786 2008-08-15 Release 5.9 accounting
CG31786 2008-12-18 5.12 accounting

Clone Sequence Records

SD25477.complete Sequence

1846 bp (1846 high quality bases) assembled on 2003-02-13

GenBank Submission: BT003744

> SD25477.complete
TGTACACTCGCTTAATAAAAACCAAATAAAGATAAAATGACCAACTGCGT
TTTGAGACTTTATTAACTACATCAGAAAACTGGCTTGCACTCCGTTAAGC
GATCCGTACACCTTAAATTGGTGAATCAATTTACTTAAAGGACACTGGGC
GTTTTCAAGATCCACAAAGACCTCAAAACCCCACCAAGAAAAAGAGGACA
ATGACTAAACTTTTGGGGCTGACTCTCTGAAATAAAAGGCGAGCAATGCA
TGGCGGATCTCAGCGTTTTTAGCTGCTAAAATTCAAAACTCTGGCCAAGA
CTGCTCTGCCACGCCCACTTATATTTAAAGCAAAGGGGGCGTTTATCCAT
TCTGAATTCTTCGAGAAAATGTCGCGCATTGTTTGACTTGAGCTATGCTT
TATTATAGACAAACAACCGGCAGCGACTAAGCCAAGTCTATTAACAGGGC
AAACAAAGCCAGGCCGCCAAAGAGAAACTGATTGTAAAGAAGCGAAAAGA
ATGTAAGCAGTCAAAAAAGGAAGAAAGTCGAAAAAGCTGGCAATGAGAGG
GCCAAGAACACAAGGGGCGCGGGCCAGAATTGAAACAGTTAGCTGGCAAA
TCGGATTGCGAATCTGCTGTATTGACACAAGGAAACCGTTAGCCGGCTTA
GCCAGCAAGAGGGCAAATTTAAAATTAAGAATATAGCAAGCAAGACCGTT
TCAAATCAAAGTGATATGCTAATGCCCCAGTCGCGAAGGACTTGAAGTCG
TGTGGCATGAATATTTCATGAGCGCAGGAGTGATGACAATAAGCCGGCTC
CGGGAATAAAAAAGAAGCGCAGAGTGAAATCAGGACGATGACGGAGCTAA
GACGAACTAATGGCCTGCACAAGCAGCACTCCCTGAGAGATCGACAGGTG
CATCCGATGCTGCACGCCCTGGCGGATCACGGCTGCAACCTCAGCAGCGG
TGGCAACAGTGCGGCCAGCACCACCAGCAGTAGTACGGCCACGGCCACCA
CAGCACTTGGTGGTGCCGGCGGTTTGGGCGGTCTGGGTGGCCTGAACGGT
GGTGTCGGCATAACAAGTCAGCGGAGCGTTGAGTTCGATGAGCACGACAT
CTTCTACGTCTCACCATCCAAGCGAAAAGGAGCCACTTCAGTAGGTTCCT
CTGGCAATGTGGTAACCTTCTCGAATTTTGTAAGTGAACAACGCCTGACG
CCCTCGTCGTCGAACCGCGGATCCCTGAAGCGGAGCAAGGGCCGCTCCAA
TCAGTCCCTGTGCAGCTGCGATGCCGGCGACGAGGCCCAACTGGATTTGC
AACCGAATGCGGCAAGGCCGCTGTACGAGTACAGTCTGGAACGAAAGCGT
AAGACACACACCTACTCCTGCGAGCAGAATGCGCAGATACTTATGAGACT
GGAGCGCGAGCGTAATCGTAAATTATCGCTGACTGGGATGGAAACGGGAT
TGGGAATCGGACTGGGAGTGGGATTGGGAATGGGATCTGGAGGAGGAACA
GGAGGAGCCGGAGACCCTCAGAAATACAGACAGAGTTTTGCAACAGGCAA
ATGCGCTAACCAAACAGAGCGTGGCACGTAGGAGGTGGATGTTGTAGTCT
GACGACCGAGTGACTGACACCTGCCACACCCACTGACTCTTGGGGCTCGG
GCTCAGGCCACCAAGCTGTCTTCGAATCGCGAGGGGAATGGAGGAGACTT
CAAGTTCGCCAAGTATTAGGGCACACATGAATTTTGATTGTTATGGCAAA
TGCTGTGAGCCAGCACTTCGGGTCGATAAATTTCAGAGATAATCCAATAC
AATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

SD25477.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:20:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG31786-RB 1733 CG31786-RB 8..1733 78..1803 8600 99.8 Plus
nc_5899.a 697 nc_5899.a 28..104 1..77 385 100 Plus
CG42335-RD 2235 CG42335-RD 2195..2235 77..37 205 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:46:26
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 18209227..18209968 1141..400 3665 99.6 Minus
chr2L 23010047 chr2L 18208439..18208821 1521..1139 1900 99.7 Minus
chr2L 23010047 chr2L 18208082..18208366 1803..1519 1425 100 Minus
chr2L 23010047 chr2L 18214136..18214377 399..158 1210 100 Minus
chr2L 23010047 chr2L 18214437..18214518 159..78 410 100 Minus
chr2L 23010047 chr2L 3202384..3202460 77..1 385 100 Minus
chr2L 23010047 chr2L 3209313..3209389 77..1 385 100 Minus
chr2L 23010047 chr2L 4600909..4600985 77..1 385 100 Minus
chr2L 23010047 chr2L 4607851..4607927 77..1 385 100 Minus
chrX 22417052 chrX 21552536..21552612 77..1 385 100 Minus
chrX 22417052 chrX 21554742..21554818 1..77 385 100 Plus
chrX 22417052 chrX 21558863..21558939 77..1 385 100 Minus
chrX 22417052 chrX 21562252..21562328 1..77 385 100 Plus
chrX 22417052 chrX 21566375..21566451 77..1 385 100 Minus
chrX 22417052 chrX 21569695..21569771 1..77 385 100 Plus
chrU 10048995 chrU 6365304..6365380 1..77 385 100 Plus
chrU 10048995 chrU 6700041..6700117 77..1 385 100 Minus
chrU 10048995 chrU 6715435..6715511 77..1 385 100 Minus
chrU 10048995 chrU 8874929..8875005 77..1 385 100 Minus
chr3RHet 2517486 chr3RHet 1982313..1982389 77..1 385 100 Minus
chr3RHet 2517486 chr3RHet 1989224..1989300 77..1 385 100 Minus
chr3RHet 2517486 chr3RHet 2047926..2048002 77..1 385 100 Minus
chr3RHet 2517486 chr3RHet 2054972..2055048 77..1 385 100 Minus
chr3R 27901430 chr3R 23997014..23997090 1..77 385 100 Plus
chr3R 27901430 chr3R 24003945..24004021 1..77 385 100 Plus
chr3L 24539361 chr3L 925414..925490 1..77 385 100 Plus
chr3L 24539361 chr3L 932341..932417 1..77 385 100 Plus
chr3L 24539361 chr3L 17720555..17720631 77..1 385 100 Minus
chr2R 21145070 chr2R 187774..187850 77..1 385 100 Minus
chr2R 21145070 chr2R 194704..194780 77..1 385 100 Minus
chr2R 21145070 chr2R 267369..267445 1..77 385 100 Plus
chr2R 21145070 chr2R 274347..274423 1..77 385 100 Plus
chr2R 21145070 chr2R 6510336..6510412 1..77 385 100 Plus
chr2R 21145070 chr2R 6514810..6514886 77..1 385 100 Minus
chr2R 21145070 chr2R 6517701..6517777 1..77 385 100 Plus
chr2R 21145070 chr2R 6524602..6524678 1..77 385 100 Plus
chr2R 21145070 chr2R 6547178..6547254 1..77 385 100 Plus
chr2R 21145070 chr2R 6554139..6554215 1..77 385 100 Plus
chr2R 21145070 chr2R 10902788..10902864 77..1 385 100 Minus
chr2R 21145070 chr2R 10909712..10909788 77..1 385 100 Minus
chr2R 21145070 chr2R 20614190..20614266 1..77 385 100 Plus
chr2R 21145070 chr2R 20621199..20621275 1..77 385 100 Plus
chrX 22417052 chrX 17446692..17446768 1..77 370 98.7 Plus
chrU 10048995 chrU 9091550..9091626 77..1 370 98.7 Minus
chr3R 27901430 chr3R 5664330..5664406 1..77 370 98.7 Plus
chr3R 27901430 chr3R 5671253..5671329 1..77 370 98.7 Plus
chr3R 27901430 chr3R 17584957..17585033 77..1 370 98.7 Minus
chr3R 27901430 chr3R 17591850..17591926 77..1 370 98.7 Minus
chr2R 21145070 chr2R 15802088..15802164 77..1 370 98.7 Minus
chr2R 21145070 chr2R 15809001..15809077 77..1 370 98.7 Minus
chrU 10048995 chrU 6568948..6569022 1..75 360 98.7 Plus
chrU 10048995 chrU 9759114..9759188 75..1 360 98.7 Minus
chrU 10048995 chrU 8363208..8363284 1..77 355 97.4 Plus
chr3L 24539361 chr3L 19106677..19106747 77..7 355 100 Minus
chr3L 24539361 chr3L 19113625..19113695 77..7 355 100 Minus
chrX 22417052 chrX 2738810..2738880 77..7 340 98.6 Minus
chrX 22417052 chrX 2745721..2745791 77..7 340 98.6 Minus
chr3L 24539361 chr3L 2966475..2966552 1..77 250 91 Plus
chr3L 24539361 chr3L 2973399..2973476 1..77 250 91 Plus
chr3L 24539361 chr3L 17727420..17727461 42..1 210 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:58:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:46:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18210557..18211298 1141..400 3695 99.9 Minus
2L 23513712 2L 18209769..18210151 1521..1139 1900 99.7 Minus
2L 23513712 2L 18209411..18209696 1804..1519 1430 100 Minus
2L 23513712 2L 18215464..18215705 399..158 1210 100 Minus
2L 23513712 2L 18215765..18215846 159..78 410 100 Minus
2L 23513712 2L 3209748..3209824 77..1 385 100 Minus
2L 23513712 2L 4601783..4601859 77..1 385 100 Minus
2L 23513712 2L 4608725..4608801 77..1 385 100 Minus
2L 23513712 2L 3202819..3202895 77..1 385 100 Minus
U 3151297 U 1237863..1237939 77..1 385 100 Minus
U 3151297 U 2859893..2859969 1..77 385 100 Plus
U 3151297 U 2993083..2993159 77..1 385 100 Minus
Y 3667352 Y 1919389..1919465 77..1 385 100 Minus
Y 3667352 Y 1926342..1926418 77..1 385 100 Minus
Xmm 1049845 Xmm 255689..255765 77..1 385 100 Minus
X 23542271 X 21687378..21687454 77..1 385 100 Minus
X 23542271 X 21689584..21689660 1..77 385 100 Plus
X 23542271 X 21693705..21693781 77..1 385 100 Minus
X 23542271 X 21697094..21697170 1..77 385 100 Plus
X 23542271 X 21701217..21701293 77..1 385 100 Minus
X 23542271 X 21704537..21704613 1..77 385 100 Plus
3R 32079331 3R 3433112..3433188 1..77 385 100 Plus
3R 32079331 3R 3440159..3440235 1..77 385 100 Plus
3R 32079331 3R 3498862..3498938 1..77 385 100 Plus
3R 32079331 3R 3505769..3505845 1..77 385 100 Plus
3R 32079331 3R 28174066..28174142 1..77 385 100 Plus
3R 32079331 3R 28180997..28181073 1..77 385 100 Plus
3L 28110227 3L 925572..925648 1..77 385 100 Plus
3L 28110227 3L 932499..932575 1..77 385 100 Plus
3L 28110227 3L 17730931..17731007 77..1 385 100 Minus
2R 25286936 2R 24735289..24735365 1..77 385 100 Plus
2R 25286936 2R 4307149..4307225 77..1 385 100 Minus
2R 25286936 2R 4300219..4300295 77..1 385 100 Minus
2R 25286936 2R 4379795..4379871 1..77 385 100 Plus
2R 25286936 2R 4386773..4386849 1..77 385 100 Plus
2R 25286936 2R 10622748..10622824 1..77 385 100 Plus
2R 25286936 2R 10627222..10627298 77..1 385 100 Minus
2R 25286936 2R 10630113..10630189 1..77 385 100 Plus
2R 25286936 2R 10637014..10637090 1..77 385 100 Plus
2R 25286936 2R 10659593..10659669 1..77 385 100 Plus
2R 25286936 2R 10666554..10666630 1..77 385 100 Plus
2R 25286936 2R 15015537..15015613 77..1 385 100 Minus
2R 25286936 2R 15022461..15022537 77..1 385 100 Minus
2R 25286936 2R 24728280..24728356 1..77 385 100 Plus
U 3151297 U 1323589..1323665 77..1 370 98.7 Minus
Y 3667352 Y 2388017..2388093 1..77 370 98.7 Plus
Y 3667352 Y 2394945..2395021 1..77 370 98.7 Plus
X 23542271 X 17557339..17557415 1..77 370 98.7 Plus
3R 32079331 3R 9838504..9838580 1..77 370 98.7 Plus
3R 32079331 3R 9845427..9845503 1..77 370 98.7 Plus
3R 32079331 3R 21761201..21761277 77..1 370 98.7 Minus
3R 32079331 3R 21768094..21768170 77..1 370 98.7 Minus
2R 25286936 2R 19914924..19915000 77..1 370 98.7 Minus
2R 25286936 2R 19921837..19921913 77..1 370 98.7 Minus
Y 3667352 Y 2496390..2496464 1..75 360 98.7 Plus
Y 3667352 Y 2503318..2503392 1..75 360 98.7 Plus
Y 3667352 Y 2779158..2779232 1..75 360 98.7 Plus
Y 3667352 Y 2786068..2786142 1..75 360 98.7 Plus
Ymm 880023 Ymm 607233..607307 75..1 360 98.7 Minus
3L 28110227 3L 19117122..19117192 77..7 355 100 Minus
3L 28110227 3L 19124070..19124140 77..7 355 100 Minus
Ymm 880023 Ymm 612369..612445 1..77 355 97.4 Plus
X 23542271 X 2844979..2845049 77..7 340 98.6 Minus
X 23542271 X 2851890..2851960 77..7 340 98.6 Minus
3L 28110227 3L 2967119..2967196 1..77 250 91 Plus
3L 28110227 3L 2974043..2974120 1..77 250 91 Plus
3L 28110227 3L 17737796..17737837 42..1 210 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:59:31
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18210557..18211298 1141..400 3695 99.8 Minus
2L 23513712 2L 18209769..18210151 1521..1139 1900 99.7 Minus
2L 23513712 2L 18209411..18209696 1804..1519 1430 100 Minus
2L 23513712 2L 18215464..18215705 399..158 1210 100 Minus
2L 23513712 2L 18215765..18215846 159..78 410 100 Minus
2L 23513712 2L 3202819..3202895 77..1 385 100 Minus
2L 23513712 2L 4608725..4608801 77..1 385 100 Minus
2L 23513712 2L 4601783..4601859 77..1 385 100 Minus
2L 23513712 2L 3209748..3209824 77..1 385 100 Minus
2R 25260384 2R 24736488..24736564 1..77 385 100 Plus
2R 25260384 2R 24729479..24729555 1..77 385 100 Plus
2R 25260384 2R 10667753..10667829 1..77 385 100 Plus
2R 25260384 2R 10660792..10660868 1..77 385 100 Plus
2R 25260384 2R 10638213..10638289 1..77 385 100 Plus
2R 25260384 2R 10631312..10631388 1..77 385 100 Plus
2R 25260384 2R 10623947..10624023 1..77 385 100 Plus
2R 25260384 2R 4387972..4388048 1..77 385 100 Plus
2R 25260384 2R 4380994..4381070 1..77 385 100 Plus
2R 25260384 2R 15023660..15023736 77..1 385 100 Minus
2R 25260384 2R 15016736..15016812 77..1 385 100 Minus
2R 25260384 2R 10628421..10628497 77..1 385 100 Minus
2R 25260384 2R 4308348..4308424 77..1 385 100 Minus
2R 25260384 2R 4301418..4301494 77..1 385 100 Minus
3R 31820162 3R 27921828..27921904 1..77 385 100 Plus
3R 31820162 3R 27914897..27914973 1..77 385 100 Plus
3R 31820162 3R 3167207..3167283 1..77 385 100 Plus
3R 31820162 3R 3160300..3160376 1..77 385 100 Plus
3R 31820162 3R 3101597..3101673 1..77 385 100 Plus
3R 31820162 3R 3094550..3094626 1..77 385 100 Plus
X 23527363 X 21689629..21689705 1..77 385 100 Plus
X 23527363 X 21682186..21682262 1..77 385 100 Plus
X 23527363 X 21674676..21674752 1..77 385 100 Plus
X 23527363 X 21686309..21686385 77..1 385 100 Minus
X 23527363 X 21678797..21678873 77..1 385 100 Minus
X 23527363 X 21672470..21672546 77..1 385 100 Minus
3L 28103327 3L 932499..932575 1..77 385 100 Plus
3L 28103327 3L 925572..925648 1..77 385 100 Plus
3L 28103327 3L 17724031..17724107 77..1 385 100 Minus
Y 3410481 Y 2025451..2025527 77..1 385 100 Minus
Y 3410481 Y 2018498..2018574 77..1 385 100 Minus
Unimproved_211000022278544_374_1527 1153 Unimproved_211000022278544_374_1527 793..869 77..1 385 100 Minus
2R 25260384 2R 19923036..19923112 77..1 370 98.7 Minus
2R 25260384 2R 19916123..19916199 77..1 370 98.7 Minus
3R 31820162 3R 9586258..9586334 1..77 370 98.7 Plus
3R 31820162 3R 9579335..9579411 1..77 370 98.7 Plus
3R 31820162 3R 21508925..21509001 77..1 370 98.7 Minus
3R 31820162 3R 21502032..21502108 77..1 370 98.7 Minus
X 23527363 X 17565437..17565513 1..77 370 98.7 Plus
Y 3410481 Y 2494054..2494130 1..77 370 98.7 Plus
Y 3410481 Y 2487126..2487202 1..77 370 98.7 Plus
Y 3410481 Y 2714269..2714343 1..75 360 98.6 Plus
Y 3410481 Y 2707359..2707433 1..75 360 98.6 Plus
Unmapped_scaffold_03 170808 Unmapped_scaffold_03 7098..7172 1..75 360 98.6 Plus
Unmapped_scaffold_03 170808 Unmapped_scaffold_03 170..244 1..75 360 98.6 Plus
3L 28103327 3L 19117170..19117240 77..7 355 100 Minus
3L 28103327 3L 19110222..19110292 77..7 355 100 Minus
X 23527363 X 2859988..2860058 77..7 340 98.5 Minus
X 23527363 X 2853077..2853147 77..7 340 98.5 Minus
3L 28103327 3L 2974043..2974120 1..77 260 91 Plus
3L 28103327 3L 2967119..2967196 1..77 260 91 Plus
3L 28103327 3L 17730896..17730937 42..1 210 100 Minus
Blast to na_te.dros performed 2019-03-15 20:46:24
Subject Length Description Subject Range Query Range Score Percent Strand
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 342..418 1..77 385 100 Plus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 7380..7456 1..77 385 100 Plus

SD25477.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:47:10 Download gff for SD25477.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 18208082..18208363 1522..1803 100 <- Minus
chr2L 18208439..18208818 1142..1521 88 <- Minus
chr2L 18209227..18209968 400..1141 99 <- Minus
chr2L 18214136..18214375 160..399 100 <- Minus
chr2L 18214437..18214518 78..159 100 == Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 21:10:50 Download gff for SD25477.complete
Subject Subject Range Query Range Percent Splice Strand
CG31786-RB 1..744 838..1581 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:51:01 Download gff for SD25477.complete
Subject Subject Range Query Range Percent Splice Strand
CG42750-RB 1..691 838..1528 99 == Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:20:13 Download gff for SD25477.complete
Subject Subject Range Query Range Percent Splice Strand
CG42750-RB 1..691 838..1528 99 == Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:42:11 Download gff for SD25477.complete
Subject Subject Range Query Range Percent Splice Strand
CG31786-RA 1..684 838..1521 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:27:57 Download gff for SD25477.complete
Subject Subject Range Query Range Percent Splice Strand
CG42750-RB 1..691 838..1528 99 == Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:04:27 Download gff for SD25477.complete
Subject Subject Range Query Range Percent Splice Strand
CG31786-RB 1..1733 70..1803 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:51:01 Download gff for SD25477.complete
Subject Subject Range Query Range Percent Splice Strand
CG42750-RB 1414..2542 400..1528 99 == Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:20:13 Download gff for SD25477.complete
Subject Subject Range Query Range Percent Splice Strand
CG42750-RC 1319..2779 65..1528 99 == Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:42:11 Download gff for SD25477.complete
Subject Subject Range Query Range Percent Splice Strand
CG31786-RA 1..1451 70..1521 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:27:57 Download gff for SD25477.complete
Subject Subject Range Query Range Percent Splice Strand
CG42750-RC 1319..2779 65..1528 99 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:47:10 Download gff for SD25477.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18215765..18215846 78..159 100 == Minus
2L 18209412..18209693 1522..1803 100 <- Minus
2L 18209769..18210148 1142..1521 99 <- Minus
2L 18210557..18211298 400..1141 99 <- Minus
2L 18215464..18215703 160..399 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:47:10 Download gff for SD25477.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18215765..18215846 78..159 100 == Minus
2L 18209412..18209693 1522..1803 100 <- Minus
2L 18209769..18210148 1142..1521 99 <- Minus
2L 18210557..18211298 400..1141 99 <- Minus
2L 18215464..18215703 160..399 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:47:10 Download gff for SD25477.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18215765..18215846 78..159 100 == Minus
2L 18209412..18209693 1522..1803 100 <- Minus
2L 18209769..18210148 1142..1521 99 <- Minus
2L 18210557..18211298 400..1141 99 <- Minus
2L 18215464..18215703 160..399 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:20:13 Download gff for SD25477.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18209769..18210148 1142..1521 99 <- Minus
arm_2L 18209412..18209693 1522..1803 100 <- Minus
arm_2L 18210557..18211298 400..1141 99 <- Minus
arm_2L 18215464..18215703 160..399 100 <- Minus
arm_2L 18215765..18215846 78..159 100 == Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:12:51 Download gff for SD25477.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18209412..18209693 1522..1803 100 <- Minus
2L 18209769..18210148 1142..1521 99 <- Minus
2L 18210557..18211298 400..1141 99 <- Minus
2L 18215464..18215703 160..399 100 <- Minus
2L 18215765..18215846 78..159 100 == Minus

SD25477.pep Sequence

Translation from 837 to 1580

> SD25477.pep
MTELRRTNGLHKQHSLRDRQVHPMLHALADHGCNLSSGGNSAASTTSSST
ATATTALGGAGGLGGLGGLNGGVGITSQRSVEFDEHDIFYVSPSKRKGAT
SVGSSGNVVTFSNFVSEQRLTPSSSNRGSLKRSKGRSNQSLCSCDAGDEA
QLDLQPNAARPLYEYSLERKRKTHTYSCEQNAQILMRLERERNRKLSLTG
METGLGIGLGVGLGMGSGGGTGGAGDPQKYRQSFATGKCANQTERGT*

SD25477.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 07:11:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14852-PA 254 GF14852-PA 1..254 1..247 811 75.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 07:11:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21713-PA 241 GG21713-PA 1..204 1..203 874 96.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 07:11:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10537-PA 207 GH10537-PA 1..201 1..201 581 62.6 Plus
Dgri\GH23793-PA 207 GH23793-PA 1..201 1..201 577 62.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG42750-PB 1068 CG42750-PB 1..228 1..228 1174 100 Plus
CG42750-PC 1067 CG42750-PC 1..227 1..228 1158 99.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 07:11:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20835-PA 232 GI20835-PA 1..209 1..201 581 65.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 07:11:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19432-PA 292 GL19432-PA 1..253 1..228 681 68.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 07:11:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16476-PA 262 GA16476-PA 1..255 1..230 648 66.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 07:11:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17094-PA 237 GM17094-PA 1..228 1..228 1160 98.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 07:11:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21838-PA 237 GD21838-PA 1..228 1..228 1170 99.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 07:11:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19845-PA 237 GJ19845-PA 1..215 1..201 521 63.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 07:11:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14578-PA 230 GK14578-PA 1..207 1..198 725 78.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 07:11:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12737-PA 247 GE12737-PA 1..238 1..228 1090 91.6 Plus

SD25477.hyp Sequence

Translation from 837 to 1580

> SD25477.hyp
MTELRRTNGLHKQHSLRDRQVHPMLHALADHGCNLSSGGNSAASTTSSST
ATATTALGGAGGLGGLGGLNGGVGITSQRSVEFDEHDIFYVSPSKRKGAT
SVGSSGNVVTFSNFVSEQRLTPSSSNRGSLKRSKGRSNQSLCSCDAGDEA
QLDLQPNAARPLYEYSLERKRKTHTYSCEQNAQILMRLERERNRKLSLTG
METGLGIGLGVGLGMGSGGGTGGAGDPQKYRQSFATGKCANQTERGT*

SD25477.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:01:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG42750-PB 1068 CG42750-PB 1..228 1..228 1174 100 Plus
CG42750-PC 1067 CG42750-PC 1..227 1..228 1158 99.6 Plus