Clone SD26153 Report

Search the DGRC for SD26153

Clone and Library Details

Library:SD
Tissue Source:Drosophila melanogaster Schneider L2 cell culture
Created by:Ling Hong
Date Registered:1999-02-25
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:261
Well:53
Vector:pOT2
Associated Gene/TranscriptCG10688-RA
Protein status:SD26153.pep: gold
Preliminary Size:859
Sequenced Size:981

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10688 2002-01-01 Sim4 clustering to Release 2
CG10688 2003-01-01 Sim4 clustering to Release 3
CG10688 2003-05-02 Blastp of sequenced clone
CG10688 2008-04-29 Release 5.5 accounting
CG10688 2008-08-15 Release 5.9 accounting
CG10688 2008-12-18 5.12 accounting

Clone Sequence Records

SD26153.complete Sequence

981 bp (981 high quality bases) assembled on 2003-05-02

GenBank Submission: BT009926

> SD26153.complete
CATACGTGGACATAAATATCTGGATATTAAACACCTGCTGATTTACCACA
AAATTTAAATGCAAAATGACCACCGCCGCATTGAAGCGTGATGAAATCCT
GCTGCTCTTCGACGTGGACGGCACGCTAACGATGCCCAGATCCGTGGTCA
CTCCGGAGTTCGAGGAGTTCTTCTACTCGCGGGTTAAGCCGAGGGCGACC
ATCGGAATCGTCGGAGGCTCGGATTTGGAGAAGATGTTCGAGCAGCTGAA
TGGCAGGAAGATACTCAACGAGTTCGACTTCATATTCCCAGAAAATGGGC
TGGTGCAGATTGAGGGCGGAAAGGAGGTGGGAAAGCAGAATATCATCATG
CATTTGGGCGAGGAGACGGTGAAACGCTTCATTAACTTTGTGCTGCGCTA
TCTGTCCGAACTGGATGTGCCCATCAAGAGGGGCACCTTTATCGAATTCC
GAAATGGCATGATGAACGTATGTCCCATTGGCAGGCAGTGCACTCGGGAG
GAGCGCAACATGTTCGCCGAATACGACATTGAGCACAAGGTGCGCGAGAA
AATGATCAAGGACCTGAAGCAGGAGTTTGCCGATGTGGATCTCACGTACT
CGATTGGTGGTCAGATCAGCTTCGATGTCTTCCCGCATGGTTGGGACAAG
ACCTACTGCCTGCGACACATCGAAGCGCACTACAAGTTCAAGGAAATCCA
CTTCTTTGGCGATAAAACGGAGCCGGGCGGCAATGACTATGAGATCTATA
GCGATCCTCGAACCATCAGCCATAGGGTATATACTCCCAAGGATACGCAA
CGCATTCTCACCGAGATTCTGGAGCTGTGAGAATTTCGAGCTTACTCAGC
AGTTGAAAATATTCCATTTTTATACATGTGTACAATTGTTAACCAAATTT
AATATATAGTCACTGGAAATTCTTAAAAAAAAAACAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

SD26153.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:43:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG10688-RA 926 CG10688-RA 1..926 1..926 4495 99 Plus
CG4069-RA 1799 CG4069-RA 1654..1799 926..781 730 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:04:12
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 12525192..12526117 1..926 4510 99.1 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:58:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:04:10
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12534590..12535515 1..926 4495 99 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:04:25
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 12527690..12528615 1..926 4495 99 Plus
Blast to na_te.dros performed 2019-03-15 20:04:11
Subject Length Description Subject Range Query Range Score Percent Strand
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 3938..3977 421..382 110 75 Minus

SD26153.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:05:17 Download gff for SD26153.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 12525192..12526115 1..924 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 21:10:58 Download gff for SD26153.complete
Subject Subject Range Query Range Percent Splice Strand
CG10688-RA 1..765 66..830 98   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:37:07 Download gff for SD26153.complete
Subject Subject Range Query Range Percent Splice Strand
CG10688-RA 1..765 66..830 98   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:18:57 Download gff for SD26153.complete
Subject Subject Range Query Range Percent Splice Strand
CG10688-RA 1..765 66..830 98   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:13:08 Download gff for SD26153.complete
Subject Subject Range Query Range Percent Splice Strand
CG10688-RA 1..765 66..830 98   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:14:46 Download gff for SD26153.complete
Subject Subject Range Query Range Percent Splice Strand
CG10688-RA 1..765 66..830 98   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:40:42 Download gff for SD26153.complete
Subject Subject Range Query Range Percent Splice Strand
CG10688-RA 1..924 1..924 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:37:06 Download gff for SD26153.complete
Subject Subject Range Query Range Percent Splice Strand
CG10688-RA 1..924 1..924 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:18:57 Download gff for SD26153.complete
Subject Subject Range Query Range Percent Splice Strand
CG10688-RA 1..924 1..924 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:13:08 Download gff for SD26153.complete
Subject Subject Range Query Range Percent Splice Strand
CG10688-RA 1..924 1..924 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:14:46 Download gff for SD26153.complete
Subject Subject Range Query Range Percent Splice Strand
CG10688-RA 1..924 1..924 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:05:17 Download gff for SD26153.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12534590..12535513 1..924 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:05:17 Download gff for SD26153.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12534590..12535513 1..924 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:05:17 Download gff for SD26153.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12534590..12535513 1..924 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:18:57 Download gff for SD26153.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12527690..12528613 1..924 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:49:40 Download gff for SD26153.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12527690..12528613 1..924 99   Plus

SD26153.pep Sequence

Translation from 65 to 829

> SD26153.pep
MTTAALKRDEILLLFDVDGTLTMPRSVVTPEFEEFFYSRVKPRATIGIVG
GSDLEKMFEQLNGRKILNEFDFIFPENGLVQIEGGKEVGKQNIIMHLGEE
TVKRFINFVLRYLSELDVPIKRGTFIEFRNGMMNVCPIGRQCTREERNMF
AEYDIEHKVREKMIKDLKQEFADVDLTYSIGGQISFDVFPHGWDKTYCLR
HIEAHYKFKEIHFFGDKTEPGGNDYEIYSDPRTISHRVYTPKDTQRILTE
ILEL*

SD26153.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:26:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24687-PA 254 GF24687-PA 1..254 1..254 1205 87.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:26:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15582-PA 254 GG15582-PA 1..254 1..254 1314 96.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:26:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14714-PA 254 GH14714-PA 1..254 1..254 1161 82.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:34
Subject Length Description Subject Range Query Range Score Percent Strand
Pmm2-PA 254 CG10688-PA 1..254 1..254 1340 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:26:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12260-PA 250 GI12260-PA 3..250 7..254 1137 83.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:26:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25199-PA 254 GL25199-PA 1..254 1..254 1199 87.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:27:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10496-PA 254 GA10496-PA 1..254 1..254 1199 87.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:27:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25353-PA 254 GM25353-PA 1..254 1..254 1344 99.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:27:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14386-PA 253 GD14386-PA 1..253 1..254 1296 96.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:27:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11491-PA 254 GJ11491-PA 1..254 1..254 1173 84.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:27:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13390-PA 256 GK13390-PA 1..256 1..254 1173 85.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:27:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21911-PA 254 GE21911-PA 1..254 1..254 1314 96.9 Plus

SD26153.hyp Sequence

Translation from 65 to 829

> SD26153.hyp
MTTAALKRDEILLLFDVDGTLTMPRSVVTPEFEEFFYSRVKPRATIGIVG
GSDLEKMFEQLNGRKILNEFDFIFPENGLVQIEGGKEVGKQNIIMHLGEE
TVKRFINFVLRYLSELDVPIKRGTFIEFRNGMMNVCPIGRQCTREERNMF
AEYDIEHKVREKMIKDLKQEFADVDLTYSIGGQISFDVFPHGWDKTYCLR
HIEAHYKFKEIHFFGDKTEPGGNDYEIYSDPRTISHRVYTPKDTQRILTE
ILEL*

SD26153.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:08:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG10688-PA 254 CG10688-PA 1..254 1..254 1340 100 Plus