BDGP Sequence Production Resources |
Search the DGRC for SD27025
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 270 |
Well: | 25 |
Vector: | pOT2 |
Associated Gene/Transcript | cv-RA |
Protein status: | SD27025.pep: gold |
Preliminary Size: | 780 |
Sequenced Size: | 1923 |
Gene | Date | Evidence |
---|---|---|
CG12410 | 2002-01-01 | Sim4 clustering to Release 2 |
CG12410 | 2002-06-12 | Blastp of sequenced clone |
CG12410 | 2003-01-01 | Sim4 clustering to Release 3 |
cv | 2008-04-29 | Release 5.5 accounting |
cv | 2008-08-15 | Release 5.9 accounting |
cv | 2008-12-18 | 5.12 accounting |
1923 bp (1923 high quality bases) assembled on 2002-06-12
GenBank Submission: AY122270
> SD27025.complete ATGTATCGAGCCGAATCGTGTTGTTGCTTTGCCTAGTTGATCATTCAGTT GGCGTACGCGTGCGCTGTGATCCGCCGATCTGATCTAAACCGATCCTCCA GATTCAGACGAAGTTATTTGATTCGGATACCGGAATTGTCAACAAAAGGC AGCGGCGCCGGCGTGTGGGTAAGAAGCAGAAAAGACAGTTTGTGCCCTAG CAATAACAAAAACAAGGCGAGAGAGAGACATTGTCGCCGCGCAGTCGCTC CTCTGCCGCCGTCAACGTCAGTGCCGCAGCGCACAGTTCGATCCGCTCGC TAGTTGTTGCTGTTTAGTGTTCGTTGTGGTGTCGCTTGTTGTTGTTTTGA TCCGTCCGGAATCGCATAGCGATAATTCATATATATATAAATATATATAT ATATATATAAATTAATAGTGGTGCAAGAAGGCGAGCAAATCGAGTCAAGT CAAGTCAAATCAAATGCCCAATCTGCGTGTGCTTGTGTGCCTGTAATTGT TGTTTTGTTGTAATTGCACCCGCGCACACACTCAAACACTTAACTGCGGG AAAGAGCGCATTCCAATCCCTACACACACACGCGCACACGCACACACAGC CACCGCCGATCATGGAAATTTGGCGCTCGCTCACAGTGGGCACCATCGTG CTATTGGCCATCGTCTGCTTCTACGGCACCGTGGAGTCCTGCAACGAGGT CGTCTGCGCCTCGATCGTCTCCAAGTGCATGCTCACCCAGAGCTGCAAGT GCGAGCTGAAGAACTGCTCCTGCTGCAAGGAGTGCCTCAAATGCCTGGGC AAGAACTACGAGGAGTGCTGCAGCTGTGTGGAACTCTGTCCGAAGCCCAA CGACACCCGCAACTCGCTGTCCAAGAAGTCCCACGTGGAGGATTTCGATG GAGTGCCGGAGCTCTTCAACGCCGTGGCCACTCCGGATGAGGGCGACAGC TTCGGATACAACTGGAACGTGTTCACGTTTCAAGTGGATTTCGACAAGTA CTTGAAGGGACCCAAGCTGGAGAAGGACGGTCATTACTTCTTGAGAACCA ATGATAAGAACCTGGACGAAGCGATTCAGGAGCGTGACAACATTGTGACC GTAAACTGCACGGTTATATATCTGGATCAGTGCGTGTCGTGGAACAAGTG CCGCACCAGCTGCCAGACGACAGGCGCCAGCAGTACGAGATGGTTCCACG ACGGCTGCTGCGAATGTGTGGGATCCACGTGCATCAACTACGGCGTAAAC GAGAGCCGCTGTAGAAAGTGCCCGGAGTCAAAGGGCGAACTGGGCGACGA GCTGGACGATCCCATGGAGGAGGAGATGCAGGACTTCGGGGAGAGCATGG GTCCGTTCGATGGACCCGTGAACAACAACTACTGAGCGCGGTGCGATCAG GATGCCATTCAAGGATTCAAGAAACAGAACAAAACAGAAGCCCACATCTA ACAAATTTAGCTACTCAATTCAGTGACATTATTATTATTATTATGTAGTA CGAAGTAATATTTGTATAGCACTATTATTATTATTTTTATTTACAACAAA TGATTAGGCGCTTTGAATTGTTTTACTTATGAACCGGCCAAGATATATAT ATATATATATATTATATTACACATTTTTTTTTTGGACTAAAAAATTTATT TTTTGTCAATGTTTTTGAGAGTTTTGATATTCTGGGGCGGGGTAAAGTGC AATTACTTAGTTGACCACACTTTGCTAACTTCTTCTTGTAAATAAAAATT TCATATGTAAACAGTAATCGTTGTCTTTTAATGCATGTCTTAAGGTTAAA TAAGCAATCAAGGCTCTACAAACACTCAATAAGTACATAACTTAATTTTG GAATTAATTTACAAATGTCAACTATGTATAAATATGCCATTATTACTCAA AAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 5584783..5585492 | 1188..1898 | 3505 | 99.9 | Plus |
chrX | 22417052 | chrX | 5582721..5583391 | 163..831 | 3290 | 99.7 | Plus |
chrX | 22417052 | chrX | 5584299..5584513 | 831..1045 | 1075 | 100 | Plus |
chrX | 22417052 | chrX | 5582399..5582562 | 1..164 | 820 | 100 | Plus |
chrX | 22417052 | chrX | 5584573..5584717 | 1045..1189 | 710 | 99.3 | Plus |
chrX | 22417052 | chrX | 11879814..11879924 | 800..690 | 210 | 79.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 5692375..5693087 | 1188..1901 | 3520 | 99.9 | Plus |
X | 23542271 | X | 5690318..5690988 | 163..831 | 3290 | 99.7 | Plus |
X | 23542271 | X | 5691891..5692105 | 831..1045 | 1075 | 100 | Plus |
X | 23542271 | X | 5689996..5690159 | 1..164 | 820 | 100 | Plus |
X | 23542271 | X | 5692165..5692309 | 1045..1189 | 725 | 100 | Plus |
X | 23542271 | X | 11988727..11988837 | 800..690 | 210 | 79.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 5700473..5701185 | 1188..1901 | 3530 | 99.8 | Plus |
X | 23527363 | X | 5698416..5699086 | 163..831 | 3300 | 99.7 | Plus |
X | 23527363 | X | 5699989..5700203 | 831..1045 | 1075 | 100 | Plus |
X | 23527363 | X | 5698094..5698257 | 1..164 | 820 | 100 | Plus |
X | 23527363 | X | 5700263..5700407 | 1045..1189 | 725 | 100 | Plus |
X | 23527363 | X | 11996825..11996935 | 800..690 | 210 | 79.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 1500..1661 | 1682..1514 | 151 | 59.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 5582399..5582560 | 1..162 | 100 | -> | Plus |
chrX | 5582721..5583391 | 163..831 | 86 | -> | Plus |
chrX | 5584300..5584512 | 832..1044 | 100 | -> | Plus |
chrX | 5584573..5584717 | 1045..1189 | 99 | -> | Plus |
chrX | 5584785..5585072 | 1190..1477 | 100 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cv-RA | 1..774 | 612..1385 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cv-RA | 1..774 | 612..1385 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cv-RA | 1..774 | 612..1385 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cv-RA | 1..774 | 612..1385 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cv-RA | 1..774 | 612..1385 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cv-RA | 1..1899 | 1..1898 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cv-RA | 1..1899 | 1..1898 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cv-RA | 1..1893 | 7..1898 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cv-RA | 1..1899 | 1..1898 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cv-RA | 1..1893 | 7..1898 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5689996..5690157 | 1..162 | 100 | -> | Plus |
X | 5690318..5690988 | 163..831 | 99 | -> | Plus |
X | 5691892..5692104 | 832..1044 | 100 | -> | Plus |
X | 5692165..5692309 | 1045..1189 | 100 | -> | Plus |
X | 5692377..5693084 | 1190..1898 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5689996..5690157 | 1..162 | 100 | -> | Plus |
X | 5690318..5690988 | 163..831 | 99 | -> | Plus |
X | 5691892..5692104 | 832..1044 | 100 | -> | Plus |
X | 5692165..5692309 | 1045..1189 | 100 | -> | Plus |
X | 5692377..5693084 | 1190..1898 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5689996..5690157 | 1..162 | 100 | -> | Plus |
X | 5690318..5690988 | 163..831 | 99 | -> | Plus |
X | 5691892..5692104 | 832..1044 | 100 | -> | Plus |
X | 5692165..5692309 | 1045..1189 | 100 | -> | Plus |
X | 5692377..5693084 | 1190..1898 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 5584029..5584190 | 1..162 | 100 | -> | Plus |
arm_X | 5584351..5585021 | 163..831 | 99 | -> | Plus |
arm_X | 5585925..5586137 | 832..1044 | 100 | -> | Plus |
arm_X | 5586198..5586342 | 1045..1189 | 100 | -> | Plus |
arm_X | 5586410..5587117 | 1190..1898 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5698416..5699086 | 163..831 | 99 | -> | Plus |
X | 5699990..5700202 | 832..1044 | 100 | -> | Plus |
X | 5700263..5700407 | 1045..1189 | 100 | -> | Plus |
X | 5700475..5701182 | 1190..1898 | 99 | Plus | |
X | 5698094..5698255 | 1..162 | 100 | -> | Plus |
Translation from 611 to 1384
> SD27025.pep MEIWRSLTVGTIVLLAIVCFYGTVESCNEVVCASIVSKCMLTQSCKCELK NCSCCKECLKCLGKNYEECCSCVELCPKPNDTRNSLSKKSHVEDFDGVPE LFNAVATPDEGDSFGYNWNVFTFQVDFDKYLKGPKLEKDGHYFLRTNDKN LDEAIQERDNIVTVNCTVIYLDQCVSWNKCRTSCQTTGASSTRWFHDGCC ECVGSTCINYGVNESRCRKCPESKGELGDELDDPMEEEMQDFGESMGPFD GPVNNNY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21369-PA | 256 | GF21369-PA | 1..256 | 1..257 | 1160 | 87.5 | Plus |
Dana\GF22285-PA | 296 | GF22285-PA | 46..252 | 5..238 | 468 | 42.3 | Plus |
Dana\GF20091-PA | 119 | GF20091-PA | 1..119 | 86..233 | 319 | 45.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18776-PA | 257 | GG18776-PA | 1..257 | 1..257 | 1357 | 100 | Plus |
Dere\GG18813-PA | 251 | GG18813-PA | 7..232 | 8..242 | 469 | 40.9 | Plus |
Dere\GG14197-PA | 116 | GG14197-PA | 4..108 | 86..222 | 317 | 48.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12675-PA | 253 | GH12675-PA | 1..253 | 1..257 | 986 | 77.5 | Plus |
Dgri\GH11824-PA | 243 | GH11824-PA | 21..203 | 25..224 | 483 | 47 | Plus |
Dgri\GH15535-PA | 150 | GH15535-PA | 29..143 | 86..222 | 336 | 47.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
cv-PC | 257 | CG12410-PC | 1..257 | 1..257 | 1446 | 100 | Plus |
cv-PB | 257 | CG12410-PB | 1..257 | 1..257 | 1446 | 100 | Plus |
cv-PA | 257 | CG12410-PA | 1..257 | 1..257 | 1446 | 100 | Plus |
tsg-PA | 249 | CG1502-PA | 24..230 | 25..242 | 540 | 43.2 | Plus |
srw-PB | 136 | CG11582-PB | 24..128 | 86..222 | 342 | 48.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16252-PA | 251 | GI16252-PA | 1..251 | 1..257 | 953 | 75.2 | Plus |
Dmoj\GI14766-PA | 241 | GI14766-PA | 4..218 | 13..240 | 482 | 41 | Plus |
Dmoj\GI16812-PA | 121 | GI16812-PA | 4..121 | 86..232 | 339 | 51 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18239-PA | 258 | GL18239-PA | 1..258 | 1..257 | 1199 | 88 | Plus |
Dper\GL17975-PA | 100 | GL17975-PA | 3..99 | 106..230 | 291 | 49.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11617-PA | 258 | GA11617-PA | 1..258 | 1..257 | 1201 | 88.4 | Plus |
Dpse\GA13438-PA | 248 | GA13438-PA | 25..222 | 25..240 | 482 | 44.7 | Plus |
Dpse\GA11080-PA | 100 | GA11080-PA | 3..99 | 106..230 | 287 | 48.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12427-PA | 254 | GM12427-PA | 1..254 | 1..257 | 1327 | 98.8 | Plus |
Dsec\GM13232-PA | 247 | GM13232-PA | 24..228 | 25..242 | 464 | 42.7 | Plus |
Dsec\GM13987-PA | 116 | GM13987-PA | 4..116 | 86..232 | 316 | 46.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16744-PA | 257 | GD16744-PA | 1..257 | 1..257 | 1357 | 100 | Plus |
Dsim\GD15950-PA | 247 | GD15950-PA | 24..228 | 25..242 | 469 | 43.2 | Plus |
Dsim\GD13268-PA | 116 | GD13268-PA | 4..116 | 86..232 | 315 | 45.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16717-PA | 253 | GJ16717-PA | 1..253 | 1..257 | 999 | 78.7 | Plus |
Dvir\GJ18736-PA | 239 | GJ18736-PA | 19..216 | 25..240 | 478 | 43.5 | Plus |
Dvir\GJ12558-PA | 123 | GJ12558-PA | 4..123 | 86..233 | 335 | 48 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19972-PA | 251 | GK19972-PA | 1..251 | 1..257 | 1046 | 80.3 | Plus |
Dwil\GK20114-PA | 240 | GK20114-PA | 24..236 | 25..245 | 479 | 41.9 | Plus |
Dwil\GK19749-PA | 240 | GK19749-PA | 8..236 | 9..245 | 474 | 39.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16419-PA | 257 | GE16419-PA | 1..257 | 1..257 | 1354 | 99.6 | Plus |
Dyak\GE17577-PA | 246 | GE17577-PA | 24..227 | 25..242 | 488 | 45 | Plus |
Dyak\GE20626-PA | 116 | GE20626-PA | 4..108 | 86..222 | 321 | 48.2 | Plus |
Translation from 611 to 1384
> SD27025.hyp MEIWRSLTVGTIVLLAIVCFYGTVESCNEVVCASIVSKCMLTQSCKCELK NCSCCKECLKCLGKNYEECCSCVELCPKPNDTRNSLSKKSHVEDFDGVPE LFNAVATPDEGDSFGYNWNVFTFQVDFDKYLKGPKLEKDGHYFLRTNDKN LDEAIQERDNIVTVNCTVIYLDQCVSWNKCRTSCQTTGASSTRWFHDGCC ECVGSTCINYGVNESRCRKCPESKGELGDELDDPMEEEMQDFGESMGPFD GPVNNNY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
cv-PC | 257 | CG12410-PC | 1..257 | 1..257 | 1446 | 100 | Plus |
cv-PB | 257 | CG12410-PB | 1..257 | 1..257 | 1446 | 100 | Plus |
cv-PA | 257 | CG12410-PA | 1..257 | 1..257 | 1446 | 100 | Plus |
tsg-PA | 249 | CG1502-PA | 24..230 | 25..242 | 540 | 43.2 | Plus |
srw-PB | 136 | CG11582-PB | 24..128 | 86..222 | 342 | 48.2 | Plus |