Clone SD27303 Report

Search the DGRC for SD27303

Clone and Library Details

Library:SD
Tissue Source:Drosophila melanogaster Schneider L2 cell culture
Created by:Ling Hong
Date Registered:1999-02-25
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:273
Well:3
Vector:pOT2
Associated Gene/TranscriptCG32582-RA
Protein status:SD27303.pep: wuzgold
Sequenced Size:738

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8565 2002-01-01 Sim4 clustering to Release 2
CG32582 2002-05-19 Blastp of sequenced clone
CG32582 2003-01-01 Sim4 clustering to Release 3
CG32582 2008-08-15 Release 5.9 accounting
CG32582 2008-12-18 5.12 accounting

Clone Sequence Records

SD27303.complete Sequence

738 bp (738 high quality bases) assembled on 2002-05-19

GenBank Submission: AY119281

> SD27303.complete
ATTCGAATGTAATTATTATTTAGAAACAACAACTTTAGGATTTGCTCCAA
ACATTTTTTTTATTGTTTTTATCATTTGGAAAACCGAGTCCCAACAATAA
AATCTTAATCTATGAGGGCATGACAAAGGATGGGGCAAGGAGCTAGACGA
ATATTGCGGGCGTCCCGCTCGCAGATTTGCGGTAGTCTTCGAACGGGCGA
AGGGTCCAGCACCTCAGCAAGTTGTCGAAAAGGTACACATAATCATTTTT
GTCCTGCAGGCACAAAAATTTGGAAATTCTTTTATTAAAAGCAAAAGCGA
TGTCACTCTCTACCATGAGCAATCCCTTGAGGACTTCTGAAAGTTTTTCA
TTATTGCAGTGGTAAAAAACCCAGCTGGATTGTCCGAATTTGACCAGTGC
TCGATGCTTTGGCCGTTCGCAGTCTGCCGCATTCCTGCTAGGCGTCCCAC
CCGCCCAGGATTCCTCAACCCAGGGCCATTGGGAGAGGATCCGTCGCTAA
CAGAATAAGTATATACAGACGTTCTTACGACTCGGTTTTGGGATCTAGGA
AGCCCAGGATAAATGGCAGAATGCTGCGGACTCTGAGCTTTGTCAATCAT
ATTCATTTTGATAACATAAAGATACCACTAAATTCTGTTTTTATTTTTCT
TCGTTTTCATGTTTACCTAGATTATTTTAATATATATTTACATTGAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

SD27303.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:59:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG32582-RA 742 CG32582-RA 1..698 1..698 3490 100 Plus
CG32582-RB 568 CG32582-RB 231..568 358..695 1690 100 Plus
CG32582-RB 568 CG32582-RB 1..232 1..232 1160 100 Plus
CG8928.b 1239 CG8928.b 1132..1189 225..168 230 93.1 Minus
CG8928.b 1239 CG8928.b 966..1026 577..517 230 91.8 Minus
CG8928.b 1239 CG8928.b 1044..1093 273..224 205 94 Minus
CG8928.b 1239 CG8928.b 902..950 679..631 185 91.8 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:10:35
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 15726118..15726512 115..509 1975 100 Plus
chrX 22417052 chrX 15726574..15726761 508..695 925 99.5 Plus
chrX 22417052 chrX 15725952..15726047 22..117 480 100 Plus
chrX 22417052 chrX 15836182..15836288 117..22 260 85 Minus
chrX 22417052 chrX 15835792..15835852 577..517 230 91.8 Minus
chrX 22417052 chrX 15835958..15836015 225..168 215 91.4 Minus
chrX 22417052 chrX 15835870..15835919 273..224 205 94 Minus
chrX 22417052 chrX 15835728..15835776 679..631 185 91.8 Minus
chrX 22417052 chrX 15836075..15836111 151..115 185 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:58:58 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:10:33
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15836280..15836674 115..509 1975 100 Plus
X 23542271 X 15836736..15836926 508..698 955 100 Plus
X 23542271 X 15836114..15836209 22..117 480 100 Plus
X 23542271 X 15946320..15946383 117..54 245 92.2 Minus
X 23542271 X 15945930..15945990 577..517 230 91.8 Minus
X 23542271 X 15946096..15946153 225..168 230 93.1 Minus
X 23542271 X 15946008..15946057 273..224 205 94 Minus
X 23542271 X 15945866..15945914 679..631 185 91.8 Minus
X 23542271 X 15946213..15946249 151..115 185 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:31:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 15844378..15844772 115..509 1975 100 Plus
X 23527363 X 15844834..15845024 508..698 955 100 Plus
X 23527363 X 15844212..15844307 22..117 480 100 Plus
X 23527363 X 15954418..15954481 117..54 245 92.1 Minus
X 23527363 X 15954194..15954251 225..168 230 93.1 Minus
X 23527363 X 15954028..15954088 577..517 230 91.8 Minus
X 23527363 X 15954106..15954155 273..224 205 94 Minus
X 23527363 X 15954311..15954347 151..115 185 100 Minus
X 23527363 X 15953964..15954012 679..631 185 91.8 Minus
X 23527363 X 15954478..15954526 70..22 185 91.8 Minus
Blast to na_te.dros performed 2019-03-15 23:10:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\Tom 7060 Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). 741..803 694..629 107 65.2 Minus

SD27303.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:11:31 Download gff for SD27303.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 15725439..15725461 1..23 100 -> Plus
chrX 15725954..15726046 24..116 100 -> Plus
chrX 15726120..15726512 117..509 100 -> Plus
chrX 15726576..15726761 510..695 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 21:11:09 Download gff for SD27303.complete
Subject Subject Range Query Range Percent Splice Strand
CG32582-RA 1..159 130..288 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:39:25 Download gff for SD27303.complete
Subject Subject Range Query Range Percent Splice Strand
CG32582-RA 1..159 130..288 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:30:18 Download gff for SD27303.complete
Subject Subject Range Query Range Percent Splice Strand
CG32582-RA 1..159 130..288 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:31:12 Download gff for SD27303.complete
Subject Subject Range Query Range Percent Splice Strand
CG32582-RA 1..159 130..288 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:12:40 Download gff for SD27303.complete
Subject Subject Range Query Range Percent Splice Strand
CG32582-RA 1..695 1..695 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:39:25 Download gff for SD27303.complete
Subject Subject Range Query Range Percent Splice Strand
CG32582-RA 1..695 1..695 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:30:18 Download gff for SD27303.complete
Subject Subject Range Query Range Percent Splice Strand
CG32582-RA 1..695 1..695 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:31:13 Download gff for SD27303.complete
Subject Subject Range Query Range Percent Splice Strand
CG32582-RA 1..695 1..695 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:21:46 Download gff for SD27303.complete
Subject Subject Range Query Range Percent Splice Strand
Rrp47-RB 1252..1285 115..148 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:11:31 Download gff for SD27303.complete
Subject Subject Range Query Range Percent Splice Strand
X 15835601..15835623 1..23 100 -> Plus
X 15836116..15836208 24..116 100 -> Plus
X 15836282..15836674 117..509 100 -> Plus
X 15836738..15836923 510..695 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:11:31 Download gff for SD27303.complete
Subject Subject Range Query Range Percent Splice Strand
X 15835601..15835623 1..23 100 -> Plus
X 15836116..15836208 24..116 100 -> Plus
X 15836282..15836674 117..509 100 -> Plus
X 15836738..15836923 510..695 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:11:31 Download gff for SD27303.complete
Subject Subject Range Query Range Percent Splice Strand
X 15835601..15835623 1..23 100 -> Plus
X 15836116..15836208 24..116 100 -> Plus
X 15836282..15836674 117..509 100 -> Plus
X 15836738..15836923 510..695 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:30:18 Download gff for SD27303.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15729634..15729656 1..23 100 -> Plus
arm_X 15730149..15730241 24..116 100 -> Plus
arm_X 15730315..15730707 117..509 100 -> Plus
arm_X 15730771..15730956 510..695 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:03:46 Download gff for SD27303.complete
Subject Subject Range Query Range Percent Splice Strand
X 15844380..15844772 117..509 100 -> Plus
X 15844836..15845021 510..695 100   Plus
X 15843699..15843721 1..23 100 -> Plus
X 15844214..15844306 24..116 100 -> Plus

SD27303.pep Sequence

Translation from 129 to 287

> SD27303.pep
MGQGARRILRASRSQICGSLRTGEGSSTSASCRKGTHNHFCPAGTKIWKF
FY*
Sequence SD27303.pep has no blast hits.

SD27303.hyp Sequence

Translation from 129 to 287

> SD27303.hyp
MGQGARRILRASRSQICGSLRTGEGSSTSASCRKGTHNHFCPAGTKIWKF
FY*
Sequence SD27303.hyp has no blast hits.