BDGP Sequence Production Resources |
Search the DGRC for SD27341
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 273 |
Well: | 41 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11418-RB |
Protein status: | SD27341.pep: gold |
Preliminary Size: | 1839 |
Sequenced Size: | 2338 |
Gene | Date | Evidence |
---|---|---|
CG11418 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11418 | 2002-05-19 | Blastp of sequenced clone |
CG11418 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11418 | 2008-04-29 | Release 5.5 accounting |
CG11418 | 2008-08-15 | Release 5.9 accounting |
CG11418 | 2008-12-18 | 5.12 accounting |
2338 bp (2338 high quality bases) assembled on 2002-05-19
GenBank Submission: AY119282
> SD27341.complete CTCGACCTAACCTCAAAAATACAGCCCAACAATATTCGGTTAAATTCCAG ATCCGAAATCACCCACACCAAGTGGGCCTAGGACTTGACCTGCCCACACC CCAAGCCCGCCATGAACAGCTTAGTGCGACGCAGCGCCCAGCAGCTGAGC CTCTGGCGTACATATTGCATAAAGCACAATGCTTCAGAGGCGGCTTCTCC CGGACGGAACGCAGGCAGGCCCAACTACGAGGAGTTCATTGGCCGTCATC AGCGACAGGCCCAGTGCAGCATTGTGGTCCAGGTGAGCTCCGAAAAGTCG TATGAGGAGTTGTATAACTACTGCAGCAGCTTCGGCTCGATCATGGGTGC CCACCACTACTGCGTGCGGCAGGACGAGGCCCTGCACTACATCCTGCTGG AGTACGCCACGTCGGACGAGGCGGCGGCTGCCATCGGAGCGGGCGTTACC AATGGCGAGCTGAGCGGCGTGCCCGTGCGATCTCCCTTTCTGTGGTTCCG GGCAGCGGGAGGAGGCAGACGGAGCCCCAAGCTAGTTGCCAATACAGCGC CCGCACTGCTATCCTTGGACGGCACCCGGCAGGTGGATCAGCGCCACCTA CTGGGGCTCTTACGTGGTGCAGCGGACATCGAAGAGCAGGTGCAGCAGCT GTACGAGCACACGCGCCTGAATGAGCTGGGAATCCGTATGCGCTTTCTAG CCGCCCTACAGGTGCAGCAGGCCATTGCCGGCATGTTTCCCGCCGCCCAG GCACAGCCCTTTGGCTCGTCGGTCAACGGATTTGGGCGAATGGGCTGCGA CCTGGACCTCATCCTGCGCTTTGACAGCGATATGGGAGCTAAGATCCCAC TGGAGGCGGCGGTGCCCTCGCGACTCGTGTACCACACCAAGGAGAACCTG AGCAACGGACGCTCGCAGACGCAAAGGCACATGGAATGTTTTGGAGATAT GCTGCATCTGTTCCTGCCCGGCGTGTGCCATGTGAGACGTATTTTGCAGG CGAGGGTGCCCATCATCAAGTACCACCATGAGCATCTGGACCTGGAGGTG GACCTCTCCATGAGTAACCTCACTGGCTTTTATATGTCGGAACTGCTTTA CATGTTCGGTGAAATGGATCCGCGCGTACGGCCGTTGACCTTTACCATTC GGCGCTGGGCGCAGACCTGCGGCCTCACGAATCCCTCGCCTGGTCGCTGG ATCAGCAACTTCTCGCTCACCTGCCTGGTCATGTTCTTCCTGCAGCAGCT GCGCCAGCCCATCCTTCCCACAATTGGAGCGCTGGCCAAGGCGGCGGAGC CAGGGGACTCGCGGGTCACCGAGGACGGGATCAACTGCACCTTCACCCGG AATGTGGATCGTCTGGGCTTCAGGAGTCGAAACCAAAGCTCGCTGAGCGA GTTGTTGCTGCAGTTCTTCGAGTTCTACTCGCAGTTCGACTTCCACAACC GTGCGATATCTTTGAACGAGGGAAAGCCGCTGTCCAAGCCGGATCACTCG GCCATGTACATCGTAAACCCACTGGAGCAGTTGCTAAATGTGAGCAAAAA TGTTAGCCTGGAGGAGTGTGAACGACTGCGCATCGAGGTGCGGAACGCGG CTTGGGTTCTGGAGTCGGAGGTGGAGAATGCCTCCGTTCCGGAGGGCGAC GGCCAGGAGCTCTCCTGCGGCCTGTTGAACCTGTTTAAGCATCCCGAAAA GGCCGTCATCCGGCCGAACATGTTCTTCAAGCCGCGCATGGTCGAAGTGA GCGATCTCTTCGAACAGAAGGAGGCGGGAGCAACGTCCAGCTCAACTCCT CCCACACCAGCCATAACCTACAAGAGTGCCTCTGTGCGGCAGCAGGTGCA GAGCATCAAGGCTGCTACGCGCTCCGAACTAAAGCAGCTGCGCGGATCAG GCAGCTCAGTTCCGACGAGCAGTCCCAATAATCGACGGCGAAGCAGGTGA TGTTTCCGAGACTGACACCGCCCATGTACATACATACTTAGGATAAGCCA CAACTTCACATTCATGGTGAGTCCAGCTTAAGGTTAGGGCAGCCGCCGTT GGCTGAATTGAATGTTGTTCATACTTTAAAACCTCCTGCTAGTTAGGATA AGTCCATGATCGATCCGACTTTGAGTATTGAAACCGATTGTTGTTGACGA ATGCGACCAAGTGTGGCAGGGCAGGGAAAGATCGGTGGGGCACGTCAAAA AGAGCCGAAGGAAGCAGTCATTATTTGACTTTGTGGATGAGTAGTTATCC GTAAGACATACTTTCCTAGTTCGAGTAGTTATAATTCTGTTTTTTATGAT AATAAAACGAAAATACCGTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11418-RA | 2429 | CG11418-RA | 91..2410 | 1..2320 | 11585 | 99.9 | Plus |
CG11418-RB | 1372 | CG11418-RB | 125..1372 | 1070..2317 | 6240 | 100 | Plus |
CG11418.a | 1368 | CG11418.a | 121..1368 | 1070..2317 | 6240 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1238805..1240053 | 2319..1071 | 6230 | 99.9 | Minus |
chrX | 22417052 | chrX | 1242155..1243013 | 1070..212 | 4280 | 99.9 | Minus |
chrX | 22417052 | chrX | 1243076..1243290 | 215..1 | 1060 | 99.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1238805..1240053 | 1071..2319 | 99 | <- | Minus |
chrX | 1242155..1243010 | 215..1070 | 99 | <- | Minus |
chrX | 1243077..1243290 | 1..214 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11418-RA | 1..1839 | 112..1950 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11418-RA | 1..1839 | 112..1950 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11418-RA | 1..1839 | 112..1950 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11418-RA | 1..1839 | 112..1950 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11418-RA | 1..1839 | 112..1950 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11418-RA | 1..2317 | 1..2317 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11418-RA | 1..2319 | 1..2319 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11418-RA | 1..2319 | 1..2319 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11418-RA | 1..2317 | 1..2317 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11418-RA | 1..2319 | 1..2319 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1344872..1346120 | 1071..2319 | 100 | <- | Minus |
X | 1348222..1349077 | 215..1070 | 99 | <- | Minus |
X | 1349144..1349357 | 1..214 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1344872..1346120 | 1071..2319 | 100 | <- | Minus |
X | 1348222..1349077 | 215..1070 | 99 | <- | Minus |
X | 1349144..1349357 | 1..214 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1344872..1346120 | 1071..2319 | 100 | <- | Minus |
X | 1348222..1349077 | 215..1070 | 99 | <- | Minus |
X | 1349144..1349357 | 1..214 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1238905..1240153 | 1071..2319 | 100 | <- | Minus |
arm_X | 1242255..1243110 | 215..1070 | 99 | <- | Minus |
arm_X | 1243177..1243390 | 1..214 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1352970..1354218 | 1071..2319 | 100 | <- | Minus |
X | 1356320..1357175 | 215..1070 | 99 | <- | Minus |
X | 1357242..1357455 | 1..214 | 100 | Minus |
Translation from 111 to 1949
> SD27341.pep MNSLVRRSAQQLSLWRTYCIKHNASEAASPGRNAGRPNYEEFIGRHQRQA QCSIVVQVSSEKSYEELYNYCSSFGSIMGAHHYCVRQDEALHYILLEYAT SDEAAAAIGAGVTNGELSGVPVRSPFLWFRAAGGGRRSPKLVANTAPALL SLDGTRQVDQRHLLGLLRGAADIEEQVQQLYEHTRLNELGIRMRFLAALQ VQQAIAGMFPAAQAQPFGSSVNGFGRMGCDLDLILRFDSDMGAKIPLEAA VPSRLVYHTKENLSNGRSQTQRHMECFGDMLHLFLPGVCHVRRILQARVP IIKYHHEHLDLEVDLSMSNLTGFYMSELLYMFGEMDPRVRPLTFTIRRWA QTCGLTNPSPGRWISNFSLTCLVMFFLQQLRQPILPTIGALAKAAEPGDS RVTEDGINCTFTRNVDRLGFRSRNQSSLSELLLQFFEFYSQFDFHNRAIS LNEGKPLSKPDHSAMYIVNPLEQLLNVSKNVSLEECERLRIEVRNAAWVL ESEVENASVPEGDGQELSCGLLNLFKHPEKAVIRPNMFFKPRMVEVSDLF EQKEAGATSSSTPPTPAITYKSASVRQQVQSIKAATRSELKQLRGSGSSV PTSSPNNRRRSR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21267-PA | 611 | GF21267-PA | 1..611 | 1..612 | 2597 | 80.4 | Plus |
Dana\GF18072-PA | 709 | GF18072-PA | 323..532 | 218..454 | 216 | 26.8 | Plus |
Dana\GF21578-PA | 1334 | GF21578-PA | 993..1214 | 218..454 | 213 | 28.5 | Plus |
Dana\GF17325-PA | 566 | GF17325-PA | 276..432 | 209..390 | 154 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12706-PA | 613 | GG12706-PA | 1..613 | 1..612 | 3035 | 94.6 | Plus |
Dere\GG11113-PA | 1345 | GG11113-PA | 962..1171 | 218..454 | 226 | 28.1 | Plus |
Dere\GG18455-PA | 1361 | GG18455-PA | 1087..1242 | 294..454 | 213 | 32.5 | Plus |
Dere\GG10113-PA | 567 | GG10113-PA | 274..478 | 217..446 | 192 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11902-PA | 610 | GH11902-PA | 1..597 | 1..596 | 2341 | 74.5 | Plus |
Dgri\GH21064-PA | 578 | GH21064-PA | 202..428 | 201..454 | 229 | 26.6 | Plus |
Dgri\GH12744-PA | 1336 | GH12744-PA | 965..1209 | 208..454 | 223 | 27 | Plus |
Dgri\GH18593-PA | 566 | GH18593-PA | 264..491 | 205..455 | 186 | 26.2 | Plus |
Dgri\GH16410-PA | 679 | GH16410-PA | 2..317 | 101..450 | 166 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MTPAP-PC | 612 | CG11418-PC | 1..612 | 1..612 | 3162 | 99.8 | Plus |
MTPAP-PA | 612 | CG11418-PA | 1..612 | 1..612 | 3162 | 99.8 | Plus |
MTPAP-PB | 288 | CG11418-PB | 1..288 | 325..612 | 1480 | 100 | Plus |
wisp-PB | 1372 | CG15737-PB | 1016..1237 | 218..454 | 225 | 29.2 | Plus |
wisp-PC | 1373 | CG15737-PC | 1017..1238 | 218..454 | 225 | 29.2 | Plus |
wisp-PA | 1373 | CG15737-PA | 1017..1238 | 218..454 | 225 | 29.2 | Plus |
Gld2-PB | 1364 | CG5732-PB | 981..1190 | 218..454 | 212 | 29.4 | Plus |
Gld2-PC | 1364 | CG5732-PC | 981..1190 | 218..454 | 212 | 29.4 | Plus |
Tailor-PC | 563 | CG1091-PC | 265..472 | 217..446 | 161 | 25 | Plus |
Tailor-PA | 505 | CG1091-PA | 210..414 | 217..446 | 159 | 25 | Plus |
Tailor-PB | 560 | CG1091-PB | 265..469 | 217..446 | 159 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15633-PA | 613 | GI15633-PA | 1..593 | 1..594 | 2234 | 73.2 | Plus |
Dmoj\GI10468-PA | 455 | GI10468-PA | 71..297 | 201..454 | 230 | 26.7 | Plus |
Dmoj\GI15889-PA | 550 | GI15889-PA | 114..391 | 167..454 | 209 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14387-PA | 628 | GL14387-PA | 1..610 | 1..595 | 2490 | 76.5 | Plus |
Dper\GL23210-PA | 1280 | GL23210-PA | 896..1124 | 194..454 | 236 | 26.1 | Plus |
Dper\GL20158-PA | 1338 | GL20158-PA | 830..1141 | 166..454 | 220 | 25.5 | Plus |
Dper\GL12677-PA | 541 | GL12677-PA | 236..451 | 204..445 | 169 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10992-PA | 660 | GA10992-PA | 1..616 | 1..599 | 2489 | 75.7 | Plus |
Dpse\GA27190-PB | 1277 | GA27190-PB | 893..1121 | 194..454 | 235 | 25.8 | Plus |
Dpse\GA26658-PA | 510 | GA26658-PA | 23..344 | 173..488 | 221 | 25.4 | Plus |
Dpse\GA10633-PA | 541 | GA10633-PA | 236..451 | 204..445 | 170 | 27.3 | Plus |
Dpse\GA10633-PC | 444 | GA10633-PC | 139..353 | 204..444 | 169 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18983-PA | 315 | GM18983-PA | 1..315 | 1..320 | 1615 | 94.7 | Plus |
Dsec\GM18985-PA | 287 | GM18985-PA | 1..287 | 325..612 | 1468 | 96.5 | Plus |
Dsec\GM26408-PA | 1338 | GM26408-PA | 956..1165 | 218..454 | 217 | 29.4 | Plus |
Dsec\GM13245-PA | 430 | GM13245-PA | 69..300 | 208..454 | 211 | 28.4 | Plus |
Dsec\GM10512-PA | 563 | GM10512-PA | 268..481 | 217..455 | 172 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20928-PA | 1338 | GD20928-PA | 956..1165 | 218..454 | 218 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19221-PA | 618 | GJ19221-PA | 1..603 | 1..596 | 2269 | 72.5 | Plus |
Dvir\GJ23150-PA | 588 | GJ23150-PA | 202..428 | 201..454 | 224 | 26.3 | Plus |
Dvir\GJ16636-PA | 1399 | GJ16636-PA | 1043..1265 | 218..454 | 220 | 27.5 | Plus |
Dvir\GJ22696-PA | 561 | GJ22696-PA | 273..475 | 217..444 | 158 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16234-PA | 506 | GK16234-PA | 1..477 | 117..595 | 1917 | 74.3 | Plus |
Dwil\GK25423-PA | 1383 | GK25423-PA | 965..1252 | 178..454 | 223 | 25.9 | Plus |
Dwil\GK14246-PA | 1448 | GK14246-PA | 960..1212 | 189..454 | 222 | 26.2 | Plus |
Dwil\GK18036-PA | 582 | GK18036-PA | 15..272 | 175..459 | 187 | 27.3 | Plus |
Dwil\GK14518-PA | 565 | GK14518-PA | 259..485 | 205..456 | 163 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16534-PA | 612 | GE16534-PA | 1..612 | 1..612 | 3103 | 94.3 | Plus |
Dyak\GE10276-PA | 1341 | GE10276-PA | 958..1167 | 218..454 | 227 | 28.2 | Plus |
Dyak\GE25820-PA | 559 | GE25820-PA | 265..479 | 217..456 | 181 | 26.7 | Plus |
Translation from 111 to 1949
> SD27341.hyp MNSLVRRSAQQLSLWRTYCIKHNASEAASPGRNAGRPNYEEFIGRHQRQA QCSIVVQVSSEKSYEELYNYCSSFGSIMGAHHYCVRQDETLHYILLEYAT SDEAAAAIGAGVTNGELSGVPVRSPFLWFRAAGGGRRSPKLVANTAPALL SLDGTRQVDQRHLLGLLRGAADIEEQVQQLYEHTRLNELGIRMRFLAALQ VQQAIAGMFPAAQAQPFGSSVNGFGRMGCDLDLILRFDSDMGAKIPLEAA VPSRLVYHTKENLSNGRSQTQRHMECFGDMLHLFLPGVCHVRRILQARVP IIKYHHEHLDLEVDLSMSNLTGFYMSELLYMFGEMDPRVRPLTFTIRRWA QTCGLTNPSPGRWISNFSLTCLVMFFLQQLRQPILPTIGALAKAAEPGDS RVTEDGINCTFTRNVDRLGFRSRNQSSLSELLLQFFEFYSQFDFHNRAIS LNEGKPLSKPDHSAMYIVNPLEQLLNVSKNVSLEECERLRIEVRNAAWVL ESEVENASVPEGDGQELSCGLLNLFKHPEKAVIRPNMFFKPRMVEVSDLF EQKEAGATSSSTPPTPAITYKSASVRQQVQSIKAATRSELKQLRGSGSSV PTSSPNNRRRSR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11418-PC | 612 | CG11418-PC | 1..612 | 1..612 | 3167 | 100 | Plus |
CG11418-PA | 612 | CG11418-PA | 1..612 | 1..612 | 3167 | 100 | Plus |
CG11418-PB | 288 | CG11418-PB | 1..288 | 325..612 | 1480 | 100 | Plus |
wisp-PB | 1372 | CG15737-PB | 1016..1237 | 218..454 | 225 | 29.2 | Plus |
wisp-PC | 1373 | CG15737-PC | 1017..1238 | 218..454 | 225 | 29.2 | Plus |