BDGP Sequence Production Resources |
Search the DGRC for SD27708
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 277 |
Well: | 8 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11593-RB |
Protein status: | SD27708.pep: gold |
Sequenced Size: | 2127 |
Gene | Date | Evidence |
---|---|---|
CG11593 | 2007-09-25 | DGC5 pick |
CG11593 | 2008-04-29 | Release 5.5 accounting |
CG11593 | 2008-04-29 | Picked prior to 5.5 |
CG11593 | 2008-08-15 | Release 5.9 accounting |
CG11593 | 2008-12-18 | 5.12 accounting |
2127 bp assembled on 2007-12-03
GenBank Submission: BT031304
> SD27708.complete GTAACCTCGCCACTGGAGCCCTCTCGAAATTTTGTTTACTGGCATTTAAA ATCAGCGAATTCGGGCTAAAAAGTCTTACTTATGCACCCAGCACCGATGC CCGGAGCGACTAGATGAGTGTCTGGATGAGCGGGCCCCGAAATTTCGCAC TAGCCACACAAATTATACGGGAAACTATGAGTTTGCACTACGCGGAATCG GAATCTTCGCCGTCAGAGAGCAAAATGGACATCTCGGAGACGCCGACGGA CTCAACGGGCGTCTCGCCGCTGGCGGATGATGTTTTGCCCACCGCGCCGG AGAAGAATATCCTGAAATTGGAGCAGGCCAAGCAGGATCACGATAAGGAG GAACTGGAGTTCAAGACGACCTCCGCGCTGGACAACAGAATACTGCGTCC AGAGCTGCTGCCCATGGAGGCGATGCCACAACGACACAACATCATCGAGC GCACCCTGGCCAACAGCCATCCGCTGATGTCGCCAACCAACACGGACTCA GACTCGGAACCCTTTCAGCTGAAGAAGCAGGAGAAACAGCTGCCGAGGAG CAACTTTCCGGACGTTGTGCCCACCACGGAGACGGTGCAGGTGAAGAACA ACCTGAACCAATGCCGGAACAAGCCGCAGGACGCCAAGGTCAGCCTGCTA AGGGCCAACAGTCCGGATATCCTGAGCAGCGAGTCAGATGCGGATGTGTC CCAGTACTTGGCCGCCGTGGAGTCTAACTTTCAGTCCGTTTCCCTGATGC CCAATGGCAATGGCAAGAAATCCAAACGATCGACTGCACTCCCTGGTGGC GAGGACATATCTAGCCTGGATTCCATCTCCAATCACAGCTTCGACGATGA CGAGGACATTGAGCACAATTTGGCCTCTCTAAGTCCATCGAGCTCCCTGA TTGATGGCTTAGACGGAGAGGATGACGACGACGACTGCGAGGGTCCGGAA CTGCTGCCCGACCACGACGACGACTTGGAACTGGACCTGGAGTTCGGTTT GGCCACCACGCCCACGCCAAATGCTCCGGCATCGGCTACGGCTGCCTCAA CTCTGCCACAGTATACGGCTGCTGAAGAGAGACGTGATTCGCGGAATTGG CAGAAGATCACTTTACCGGATGGACGCACTAGGGAGATCGACATGCGGGT CATAGAGCCCTACAAGCGTGTGCTGTCCCACGGCGGCTATCTCAAATCTG GCGGTCAGAACGCCATTGTCATCTTTTGCGCCTGTCACCTGCCGGATAGG TCGAGGGCCGACTACAGCTACGTGATGGACAATTTGTTTCTGTACGTGGT CAAGACCCTGGAACAGTTGGTCACTGATGACTATGTGCTAATCTATCTGC ATGGCGGCTCCAATAGGCGTAATGTGCCACCTTTTCCCTGGCTTAAACGG TGTTATCAGCTGCTTGATCGCCGACTGCGCAAAAGCCTGAAGCACATGTA TTTGGTGCATCCGACATTCTGGATAAAATCGCTGGTTTGGATGGCGCGGC CTTTTGTGAGCACAAAGTTTTGGCGAAAGCTGGTCTACGTAAAGTCCCTG GAGGAACTGGGCATGCACGTGGTCGTGGAGAAGGCAGCCATTCCGGAGAA GGTCAAGCAATACGACGCCAAGCGGCACTGAGGCCCTGCGATGCCCCAGA CTTGTTAAACGCAAAACGCTAATGCAAACTTAACGCATTCATGCCACACT CGCTACTCGAGCCTCTGCATTCCCCATCTTCAATAAGGACTGAGGCTAAT CCTCCAAACCGATCGTTTGCGCTCTCTCGCTATGCTTTAATTTAAGATCT CAATCTTTGTGATACTTTATTTTTGCCTTCTCTCAGCCAAGTCGAAATCC CCCCCAGCATTTTTCTGTGTGAAGCGTGAAGGCGTTCAGCAAAACATCGA ACAAGTTTTTGTAGTTCTTTATTGGCAGTCGTAGAAATCGTATTAGACAC AGACTCATATGTGTTAGGATCCTATATATACACCCACATACATAATGGTA CCATGTAGTTATCGTGTAGCTTCCGCTTCATATATTTTATAGAGGAACAT ACATATGCAACCAGAAACCACCAAACTTCCGAACATGTTACCTTTCCTTT GTAGTGGCAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11593-RB | 2773 | CG11593-RB | 207..2332 | 1..2126 | 10585 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 4038197..4039419 | 1402..180 | 6085 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 4037368..4037967 | 2108..1509 | 3000 | 100 | Minus |
chr3L | 24539361 | chr3L | 4039482..4039662 | 181..1 | 905 | 100 | Minus |
chr3L | 24539361 | chr3L | 4038028..4038139 | 1510..1399 | 560 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 4038811..4040033 | 1402..180 | 6085 | 99.8 | Minus |
3L | 28110227 | 3L | 4037964..4038581 | 2126..1509 | 3075 | 99.8 | Minus |
3L | 28110227 | 3L | 4040096..4040276 | 181..1 | 905 | 100 | Minus |
3L | 28110227 | 3L | 4038642..4038753 | 1510..1399 | 560 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 4038811..4040033 | 1402..180 | 6085 | 99.8 | Minus |
3L | 28103327 | 3L | 4037964..4038581 | 2126..1509 | 3075 | 99.8 | Minus |
3L | 28103327 | 3L | 4040096..4040276 | 181..1 | 905 | 100 | Minus |
3L | 28103327 | 3L | 4038642..4038753 | 1510..1399 | 560 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 4037368..4037965 | 1511..2108 | 100 | <- | Minus |
chr3L | 4038028..4038138 | 1400..1510 | 100 | <- | Minus |
chr3L | 4038200..4039417 | 182..1399 | 99 | <- | Minus |
chr3L | 4039482..4039662 | 1..181 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11593-RB | 1..1455 | 177..1631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11593-RB | 1..1455 | 177..1631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11593-RB | 1..1455 | 177..1631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11593-RB | 1..1455 | 177..1631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11593-RB | 1..1455 | 177..1631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11593-RB | 207..2314 | 1..2108 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11593-RB | 207..2314 | 1..2108 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11593-RB | 207..2314 | 1..2108 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11593-RB | 207..2314 | 1..2108 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11593-RB | 207..2314 | 1..2108 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4037982..4038579 | 1511..2108 | 100 | <- | Minus |
3L | 4038642..4038752 | 1400..1510 | 100 | <- | Minus |
3L | 4038814..4040031 | 182..1399 | 99 | <- | Minus |
3L | 4040096..4040276 | 1..181 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4037982..4038579 | 1511..2108 | 100 | <- | Minus |
3L | 4038642..4038752 | 1400..1510 | 100 | <- | Minus |
3L | 4038814..4040031 | 182..1399 | 99 | <- | Minus |
3L | 4040096..4040276 | 1..181 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4037982..4038579 | 1511..2108 | 100 | <- | Minus |
3L | 4038642..4038752 | 1400..1510 | 100 | <- | Minus |
3L | 4038814..4040031 | 182..1399 | 99 | <- | Minus |
3L | 4040096..4040276 | 1..181 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 4037982..4038579 | 1511..2108 | 100 | <- | Minus |
arm_3L | 4038642..4038752 | 1400..1510 | 100 | <- | Minus |
arm_3L | 4038814..4040031 | 182..1399 | 99 | <- | Minus |
arm_3L | 4040096..4040276 | 1..181 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4040096..4040276 | 1..181 | 100 | Minus | |
3L | 4037982..4038579 | 1511..2108 | 100 | <- | Minus |
3L | 4038642..4038752 | 1400..1510 | 100 | <- | Minus |
3L | 4038814..4040031 | 182..1399 | 99 | <- | Minus |
Translation from 113 to 1630
> SD27708.pep MSVWMSGPRNFALATQIIRETMSLHYAESESSPSESKMDISETPTDSTGV SPLADDVLPTAPEKNILKLEQAKQDHDKEELEFKTTSALDNRILRPELLP MEAMPQRHNIIERTLANSHPLMSPTNTDSDSEPFQLKKQEKQLPRSNFPD VVPTTETVQVKNNLNQCRNKPQDAKVSLLRANSPDILSSESDADVSQYLA AVESNFQSVSLMPNGNGKKSKRSTALPGGEDISSLDSISNHSFDDDEDIE HNLASLSPSSSLIDGLDGEDDDDDCEGPELLPDHDDDLELDLEFGLATTP TPNAPASATAASTLPQYTAAEERRDSRNWQKITLPDGRTREIDMRVIEPY KRVLSHGGYLKSGGQNAIVIFCACHLPDRSRADYSYVMDNLFLYVVKTLE QLVTDDYVLIYLHGGSNRRNVPPFPWLKRCYQLLDRRLRKSLKHMYLVHP TFWIKSLVWMARPFVSTKFWRKLVYVKSLEELGMHVVVEKAAIPEKVKQY DAKRH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24411-PA | 483 | GF24411-PA | 1..483 | 22..505 | 2044 | 87.1 | Plus |
Dana\GF24803-PA | 474 | GF24803-PA | 110..242 | 364..503 | 219 | 33.6 | Plus |
Dana\GF11695-PA | 540 | GF11695-PA | 396..524 | 368..501 | 207 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14227-PA | 484 | GG14227-PA | 1..484 | 22..505 | 2519 | 97.5 | Plus |
Dere\GG15561-PA | 476 | GG15561-PA | 110..242 | 364..503 | 224 | 33.6 | Plus |
Dere\GG10715-PA | 540 | GG10715-PA | 396..524 | 368..501 | 208 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17007-PA | 478 | GH17007-PA | 1..478 | 22..505 | 1725 | 77.8 | Plus |
Dgri\GH16152-PA | 466 | GH16152-PA | 110..242 | 364..503 | 235 | 35 | Plus |
Dgri\GH21586-PA | 546 | GH21586-PA | 402..530 | 368..501 | 209 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11593-PC | 484 | CG11593-PC | 1..484 | 22..505 | 2525 | 100 | Plus |
CG11593-PB | 484 | CG11593-PB | 1..484 | 22..505 | 2525 | 100 | Plus |
RhoGAP68F-PC | 419 | CG6811-PC | 61..185 | 373..503 | 225 | 35.1 | Plus |
RhoGAP68F-PE | 475 | CG6811-PE | 117..241 | 373..503 | 225 | 35.1 | Plus |
RhoGAP68F-PD | 476 | CG6811-PD | 118..242 | 373..503 | 225 | 35.1 | Plus |
RhoGAP68F-PA | 476 | CG6811-PA | 118..242 | 373..503 | 225 | 35.1 | Plus |
CG18812-PA | 217 | CG18812-PA | 73..201 | 368..501 | 209 | 29.1 | Plus |
CG18812-PE | 225 | CG18812-PE | 73..201 | 368..501 | 209 | 29.1 | Plus |
CG18812-PB | 244 | CG18812-PB | 100..228 | 368..501 | 209 | 29.1 | Plus |
CG18812-PD | 264 | CG18812-PD | 120..248 | 368..501 | 209 | 29.1 | Plus |
CG18812-PF | 534 | CG18812-PF | 390..518 | 368..501 | 209 | 29.1 | Plus |
CG18812-PC | 540 | CG18812-PC | 396..524 | 368..501 | 209 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11422-PA | 486 | GI11422-PA | 1..486 | 22..505 | 1776 | 78.7 | Plus |
Dmoj\GI12424-PA | 466 | GI12424-PA | 110..242 | 364..503 | 233 | 35 | Plus |
Dmoj\GI19557-PA | 546 | GI19557-PA | 402..530 | 368..501 | 213 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16822-PA | 465 | GL16822-PA | 1..465 | 22..505 | 1867 | 84 | Plus |
Dper\GL25156-PA | 477 | GL25156-PA | 110..242 | 364..503 | 234 | 34.3 | Plus |
Dper\GL11245-PA | 542 | GL11245-PA | 398..526 | 368..501 | 208 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23790-PA | 465 | GA23790-PA | 1..465 | 22..505 | 1867 | 84 | Plus |
Dpse\GA23702-PA | 435 | GA23702-PA | 68..200 | 364..503 | 232 | 34.3 | Plus |
Dpse\GA15091-PA | 542 | GA15091-PA | 398..526 | 368..501 | 207 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14021-PA | 484 | GM14021-PA | 1..484 | 22..505 | 2564 | 99.2 | Plus |
Dsec\GM25330-PA | 476 | GM25330-PA | 110..242 | 364..503 | 227 | 34.3 | Plus |
Dsec\GM20761-PA | 540 | GM20761-PA | 396..524 | 368..501 | 206 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13300-PA | 484 | GD13300-PA | 1..484 | 22..505 | 2551 | 98.6 | Plus |
Dsim\GD14361-PA | 287 | GD14361-PA | 110..242 | 364..503 | 229 | 35 | Plus |
Dsim\GD10224-PA | 540 | GD10224-PA | 396..524 | 368..501 | 208 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13618-PA | 489 | GJ13618-PA | 1..489 | 22..505 | 1710 | 78 | Plus |
Dvir\GJ12319-PA | 466 | GJ12319-PA | 110..242 | 364..503 | 233 | 35 | Plus |
Dvir\GJ21132-PA | 244 | GJ21132-PA | 100..228 | 368..501 | 204 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18025-PA | 469 | GK18025-PA | 1..469 | 38..505 | 1560 | 72.7 | Plus |
Dwil\GK17548-PA | 482 | GK17548-PA | 112..242 | 364..503 | 223 | 34.3 | Plus |
Dwil\GK21585-PA | 553 | GK21585-PA | 409..537 | 368..501 | 209 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20655-PA | 484 | GE20655-PA | 1..484 | 22..505 | 2527 | 97.5 | Plus |
Dyak\GE21888-PA | 474 | GE21888-PA | 110..242 | 364..503 | 225 | 34.3 | Plus |
Dyak\GE23673-PA | 540 | GE23673-PA | 396..524 | 368..501 | 208 | 29.1 | Plus |
Translation from 113 to 1630
> SD27708.hyp MSVWMSGPRNFALATQIIRETMSLHYAESESSPSESKMDISETPTDSTGV SPLADDVLPTAPEKNILKLEQAKQDHDKEELEFKTTSALDNRILRPELLP MEAMPQRHNIIERTLANSHPLMSPTNTDSDSEPFQLKKQEKQLPRSNFPD VVPTTETVQVKNNLNQCRNKPQDAKVSLLRANSPDILSSESDADVSQYLA AVESNFQSVSLMPNGNGKKSKRSTALPGGEDISSLDSISNHSFDDDEDIE HNLASLSPSSSLIDGLDGEDDDDDCEGPELLPDHDDDLELDLEFGLATTP TPNAPASATAASTLPQYTAAEERRDSRNWQKITLPDGRTREIDMRVIEPY KRVLSHGGYLKSGGQNAIVIFCACHLPDRSRADYSYVMDNLFLYVVKTLE QLVTDDYVLIYLHGGSNRRNVPPFPWLKRCYQLLDRRLRKSLKHMYLVHP TFWIKSLVWMARPFVSTKFWRKLVYVKSLEELGMHVVVEKAAIPEKVKQY DAKRH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11593-PC | 484 | CG11593-PC | 1..484 | 22..505 | 2525 | 100 | Plus |
CG11593-PB | 484 | CG11593-PB | 1..484 | 22..505 | 2525 | 100 | Plus |
RhoGAP68F-PC | 419 | CG6811-PC | 61..185 | 373..503 | 225 | 35.1 | Plus |
RhoGAP68F-PE | 475 | CG6811-PE | 117..241 | 373..503 | 225 | 35.1 | Plus |
RhoGAP68F-PD | 476 | CG6811-PD | 118..242 | 373..503 | 225 | 35.1 | Plus |