BDGP Sequence Production Resources |
Search the DGRC for SD27954
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 279 |
Well: | 54 |
Vector: | pOT2 |
Associated Gene/Transcript | CG31800-RA |
Protein status: | SD27954.pep: gold |
Sequenced Size: | 767 |
Gene | Date | Evidence |
---|---|---|
CG10652 | 2002-01-01 | Sim4 clustering to Release 2 |
CG31800 | 2003-01-01 | Sim4 clustering to Release 3 |
CG31800 | 2008-04-29 | Release 5.5 accounting |
CG31800 | 2008-04-29 | Picked prior to 5.5 |
CG31800 | 2008-08-15 | Release 5.9 accounting |
CG31800 | 2008-12-18 | 5.12 accounting |
767 bp assembled on 2007-07-05
GenBank Submission: BT031031
> SD27954.complete AGAACACATGTTATTATTTTATTTTTGGCAGTCCATAAATTTACATAGTT GTCAATCGCGGAGTGATTACTTATTTGTATTCATGTTCGGTAGCGTGTGA TGAAAAGAGCGGCCGAAATGGACGAATTGACGTATCAGACAGCTGTAAAA AAGGCCCAACTGGTTGAGAGGAATCCCCAGTTGCAGATAAACCCCATGCG TGTGTCCATGCACCAGGAGGAGGATATCATCGAATTGGCCCAACAAATTC AGAATGCTGATAAACAATTGAAAAACACAACTTGCCAAAAGCTGGGGGTC ATAATGGAGCAGATCAAAATGCTTCAGGCCCAAGCGATGGAGATACTTAA GGAGTCCACTCTCAACCGAGATCTGCACAGTGCGGCCTGCAATTTCACCA AAAAACCCGGACACATCTATCATCTTTATCAAAGGCCATCGGGTCAAAAC TATTTCAGCATGCTATCACCGGAAGAATGGAGTCTCTCCGTTGACCAAAC ATTCAAAGGCAGCTACAGGTTGGAGTACGATTTGAGCTGGACCCCACTGG ACAAGATTAAGGAGCAGGATGAGAAGCTAAAGTGGGCGGAGCAGTGCATG CTAAAGGCACTAGATGGTGGGCGTGGTTCGGCCATGGCAATTGACTTTAA TATAAGCAATGATTGACAGAATATATTAAAAATTATTTTTATTAACATGA GGTTGTACCCAAACTTCGATGTTACTGATATTAAAATTATAAAAGCTCAA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 19032276..19032549 | 748..475 | 1370 | 100 | Minus |
chr2L | 23010047 | chr2L | 19032607..19032771 | 475..311 | 825 | 100 | Minus |
chr2L | 23010047 | chr2L | 19032824..19032982 | 312..154 | 795 | 100 | Minus |
chr2L | 23010047 | chr2L | 19033039..19033192 | 154..1 | 770 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 19033657..19033930 | 748..475 | 1370 | 100 | Minus |
2L | 23513712 | 2L | 19033988..19034152 | 475..311 | 825 | 100 | Minus |
2L | 23513712 | 2L | 19034205..19034363 | 312..154 | 795 | 100 | Minus |
2L | 23513712 | 2L | 19034420..19034573 | 154..1 | 770 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 19033657..19033930 | 748..475 | 1370 | 100 | Minus |
2L | 23513712 | 2L | 19033988..19034152 | 475..311 | 825 | 100 | Minus |
2L | 23513712 | 2L | 19034205..19034363 | 312..154 | 795 | 100 | Minus |
2L | 23513712 | 2L | 19034420..19034573 | 154..1 | 770 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 19032608..19032769 | 313..474 | 100 | <- | Minus |
chr2L | 19032824..19032981 | 155..312 | 100 | <- | Minus |
chr2L | 19033039..19033192 | 1..154 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31800-RA | 1..549 | 118..666 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31800-RA | 1..549 | 118..666 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31800-RA | 1..549 | 118..666 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31800-RA | 1..549 | 118..666 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31800-RA | 1..549 | 118..666 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31800-RA | 1..631 | 118..748 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31800-RA | 1..631 | 118..748 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31800-RA | 4..751 | 1..748 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31800-RA | 1..631 | 118..748 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31800-RA | 4..751 | 1..748 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19034205..19034362 | 155..312 | 100 | <- | Minus |
2L | 19034420..19034573 | 1..154 | 100 | Minus | |
2L | 19033657..19033930 | 475..748 | 100 | <- | Minus |
2L | 19033989..19034150 | 313..474 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19034205..19034362 | 155..312 | 100 | <- | Minus |
2L | 19034420..19034573 | 1..154 | 100 | Minus | |
2L | 19033657..19033930 | 475..748 | 100 | <- | Minus |
2L | 19033989..19034150 | 313..474 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19034205..19034362 | 155..312 | 100 | <- | Minus |
2L | 19034420..19034573 | 1..154 | 100 | Minus | |
2L | 19033657..19033930 | 475..748 | 100 | <- | Minus |
2L | 19033989..19034150 | 313..474 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 19033657..19033930 | 475..748 | 100 | <- | Minus |
arm_2L | 19033989..19034150 | 313..474 | 100 | <- | Minus |
arm_2L | 19034205..19034362 | 155..312 | 100 | <- | Minus |
arm_2L | 19034420..19034573 | 1..154 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19033657..19033930 | 475..748 | 100 | <- | Minus |
2L | 19033989..19034150 | 313..474 | 100 | <- | Minus |
2L | 19034205..19034362 | 155..312 | 100 | <- | Minus |
2L | 19034420..19034573 | 1..154 | 100 | Minus |
Translation from 99 to 665
> SD27954.hyp MKRAAEMDELTYQTAVKKAQLVERNPQLQINPMRVSMHQEEDIIELAQQI QNADKQLKNTTCQKLGVIMEQIKMLQAQAMEILKESTLNRDLHSAACNFT KKPGHIYHLYQRPSGQNYFSMLSPEEWSLSVDQTFKGSYRLEYDLSWTPL DKIKEQDEKLKWAEQCMLKALDGGRGSAMAIDFNISND*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31800-PA | 182 | CG31800-PA | 1..182 | 7..188 | 948 | 100 | Plus |
Translation from 99 to 665
> SD27954.pep MKRAAEMDELTYQTAVKKAQLVERNPQLQINPMRVSMHQEEDIIELAQQI QNADKQLKNTTCQKLGVIMEQIKMLQAQAMEILKESTLNRDLHSAACNFT KKPGHIYHLYQRPSGQNYFSMLSPEEWSLSVDQTFKGSYRLEYDLSWTPL DKIKEQDEKLKWAEQCMLKALDGGRGSAMAIDFNISND*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15218-PA | 181 | GF15218-PA | 1..181 | 7..188 | 847 | 86.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21660-PA | 182 | GG21660-PA | 1..182 | 7..188 | 915 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10888-PA | 181 | GH10888-PA | 4..176 | 9..184 | 678 | 70.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31800-PA | 182 | CG31800-PA | 1..182 | 7..188 | 948 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13030-PA | 180 | GI13030-PA | 4..180 | 9..188 | 700 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19223-PA | 181 | GL19223-PA | 1..181 | 7..188 | 811 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16486-PA | 181 | GA16486-PA | 1..181 | 7..188 | 815 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17039-PA | 182 | GM17039-PA | 1..182 | 7..188 | 941 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21787-PA | 182 | GD21787-PA | 1..182 | 7..188 | 946 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11570-PA | 179 | GJ11570-PA | 4..179 | 9..188 | 730 | 73.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12680-PA | 182 | GE12680-PA | 1..182 | 7..188 | 926 | 94 | Plus |