BDGP Sequence Production Resources |
Search the DGRC for SD28012
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 280 |
Well: | 12 |
Vector: | pOT2 |
Associated Gene/Transcript | ash2-RB |
Protein status: | SD28012.pep: gold |
Preliminary Size: | 2075 |
Sequenced Size: | 1322 |
Gene | Date | Evidence |
---|---|---|
CG6677 | 2004-01-13 | Blastp of sequenced clone |
ash2 | 2008-04-29 | Release 5.5 accounting |
ash2 | 2008-08-15 | Release 5.9 accounting |
ash2 | 2008-12-18 | 5.12 accounting |
1322 bp (1322 high quality bases) assembled on 2004-01-13
GenBank Submission: BT011328
> SD28012.complete CAATTGCAAGGCCCCCGCTCCTTCAGTTCCATTGTGACCGGGTCCTGCTT CTGCTCCTGCTCATTCTCCCTCCGCGATGGCGTCATCTTTTACGGACGAG GAGTCTTCCCTCTCCAAAAACAATCGACAGAAAAGGAAATTTCCCGGCAC GGATTCGGGTCCCACGGGCAAGAAGGGTCGGCCCAGTTCCGATATTACGG CCAATGTAAAGTTGCCACCGCATGGCTATCCATTGGAACACCCCTTCAAC AAGGATGGCTATCGTTATATACTCGCCGAACCGGATCCACATGCTCCATT TCGTCAGGAGTTCGACGAGAGCTCCGATTGGGCTGGCAAACCTATCCCCG GCTGGCTCTACCGCATCCTGGTGCCACATTCTGTGCTCCTGGCGCTGCAT GATCGGGCACCACAGCTGAAAATAAGCGAGGATCGGTTGGCGGTGACGGG CGAACGTGGTTACTGCATGGTCCGAGCCACACACTCTGTGAACCGGGGAT GCTGGTACTTTGAGGTCACCATCGAAGAGATGCCCGACGGAGCTGCCACG CGACTTGGCTGGGGCCGGGAGTACGGCAACTTGCAGGCTCCATTGGGATA CGACAAGTTCGGTTACTCCTGGAGATCTCGCAAGGGCACCAAGTTTACCG AGAGCCATGGCAAACACTACAGTGATGCCTATGTGGAGGGCGATACATTG GGATTCCTCATAGAGCTGCCAGAGGAGGCGTCGCTCGACTATCTGCCCAA CACATTCAAAGATCGGCCCCTGGTCAAGTTCAAGTCTCATCTGTACTACG AGGATAAGGACAAGATCACAGAAACCCTGAAAAATCTGCACATCCTGCAG GGCAGCCGCATCGAGTTCTTTAAGAACGGTCAATCGCAGGGTGTGGCATT CGAAGACATTTATGCCGGCAGCTATTTCCCGGCCATCTCGATCCACAAAA GTGCAACGGTCAGCGTAAACTTCGGACCCGCCTTCAAGTATCCCGAGGTG CTCGTCGAGCACAAAGCCAAGGGGATGCACGATCGCGTGGAGGAGCTGAT CACAGAGCAATGTTTAGCCGACACCCTCTACCTCACAGAACACGATGGAC GTCTGCGCTTGGATAATATGGGTCTTTAGTGGGATATGTCGTCATACACA TGAGTTTTGGAGAACTAGTGTGTTATTTTTGTATGCACTATACTTTGGAA AGCAGAAATTTGAAAAGACTATCATCATACTATCATACCTAAAACATTTA AAATTTACCACTTTTAAAGCAGAAGAATTTTAAGAAAACACTCTTTTGAG ATCAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 20475109..20475489 | 105..485 | 1905 | 100 | Plus |
chr3R | 27901430 | chr3R | 20475558..20475838 | 486..766 | 1405 | 100 | Plus |
chr3R | 27901430 | chr3R | 20476345..20476624 | 1024..1303 | 1400 | 100 | Plus |
chr3R | 27901430 | chr3R | 20476029..20476287 | 766..1024 | 1295 | 100 | Plus |
chr3R | 27901430 | chr3R | 20474775..20474878 | 1..104 | 520 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 24651861..24652241 | 105..485 | 1905 | 100 | Plus |
3R | 32079331 | 3R | 24652310..24652590 | 486..766 | 1405 | 100 | Plus |
3R | 32079331 | 3R | 24653097..24653377 | 1024..1304 | 1405 | 100 | Plus |
3R | 32079331 | 3R | 24652781..24653039 | 766..1024 | 1295 | 100 | Plus |
3R | 32079331 | 3R | 24651527..24651630 | 1..104 | 520 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 24392692..24393072 | 105..485 | 1905 | 100 | Plus |
3R | 31820162 | 3R | 24393928..24394208 | 1024..1304 | 1405 | 100 | Plus |
3R | 31820162 | 3R | 24393141..24393421 | 486..766 | 1405 | 100 | Plus |
3R | 31820162 | 3R | 24393612..24393870 | 766..1024 | 1295 | 100 | Plus |
3R | 31820162 | 3R | 24392358..24392461 | 1..104 | 520 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 20474775..20474878 | 1..104 | 100 | -> | Plus |
chr3R | 20476030..20476287 | 767..1024 | 100 | -> | Plus |
chr3R | 20475558..20475838 | 486..766 | 100 | -> | Plus |
chr3R | 20475109..20475489 | 105..485 | 100 | -> | Plus |
chr3R | 20476346..20476624 | 1025..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ash2-RB | 1..1053 | 77..1129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ash2-RB | 1..1053 | 77..1129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ash2-RB | 1..1053 | 77..1129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ash2-RB | 1..1053 | 77..1129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ash2-RB | 1..1053 | 77..1129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ash2-RB | 1..1303 | 1..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ash2-RB | 1..1303 | 1..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ash2-RB | 111..1413 | 1..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ash2-RB | 1..1303 | 1..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ash2-RB | 111..1413 | 1..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24651527..24651630 | 1..104 | 100 | -> | Plus |
3R | 24651861..24652241 | 105..485 | 100 | -> | Plus |
3R | 24652310..24652590 | 486..766 | 100 | -> | Plus |
3R | 24652782..24653039 | 767..1024 | 100 | -> | Plus |
3R | 24653098..24653376 | 1025..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24651527..24651630 | 1..104 | 100 | -> | Plus |
3R | 24651861..24652241 | 105..485 | 100 | -> | Plus |
3R | 24652310..24652590 | 486..766 | 100 | -> | Plus |
3R | 24652782..24653039 | 767..1024 | 100 | -> | Plus |
3R | 24653098..24653376 | 1025..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24651527..24651630 | 1..104 | 100 | -> | Plus |
3R | 24651861..24652241 | 105..485 | 100 | -> | Plus |
3R | 24652310..24652590 | 486..766 | 100 | -> | Plus |
3R | 24652782..24653039 | 767..1024 | 100 | -> | Plus |
3R | 24653098..24653376 | 1025..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 20478032..20478312 | 486..766 | 100 | -> | Plus |
arm_3R | 20478504..20478761 | 767..1024 | 100 | -> | Plus |
arm_3R | 20478820..20479098 | 1025..1303 | 100 | Plus | |
arm_3R | 20477249..20477352 | 1..104 | 100 | -> | Plus |
arm_3R | 20477583..20477963 | 105..485 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24392692..24393072 | 105..485 | 100 | -> | Plus |
3R | 24393141..24393421 | 486..766 | 100 | -> | Plus |
3R | 24393613..24393870 | 767..1024 | 100 | -> | Plus |
3R | 24393929..24394207 | 1025..1303 | 100 | Plus | |
3R | 24392358..24392461 | 1..104 | 100 | -> | Plus |
Translation from 76 to 1128
> SD28012.pep MASSFTDEESSLSKNNRQKRKFPGTDSGPTGKKGRPSSDITANVKLPPHG YPLEHPFNKDGYRYILAEPDPHAPFRQEFDESSDWAGKPIPGWLYRILVP HSVLLALHDRAPQLKISEDRLAVTGERGYCMVRATHSVNRGCWYFEVTIE EMPDGAATRLGWGREYGNLQAPLGYDKFGYSWRSRKGTKFTESHGKHYSD AYVEGDTLGFLIELPEEASLDYLPNTFKDRPLVKFKSHLYYEDKDKITET LKNLHILQGSRIEFFKNGQSQGVAFEDIYAGSYFPAISIHKSATVSVNFG PAFKYPEVLVEHKAKGMHDRVEELITEQCLADTLYLTEHDGRLRLDNMGL *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17218-PA | 555 | GF17218-PA | 205..555 | 2..350 | 1783 | 93.2 | Plus |
Dana\GF20784-PA | 483 | GF20784-PA | 124..459 | 1..338 | 1211 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11306-PA | 556 | GG11306-PA | 215..556 | 9..350 | 1836 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18438-PA | 576 | GH18438-PA | 235..576 | 9..350 | 1699 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ash2-PB | 350 | CG6677-PB | 1..350 | 1..350 | 1886 | 100 | Plus |
ash2-PC | 556 | CG6677-PC | 215..556 | 9..350 | 1841 | 99.4 | Plus |
ash2-PE | 220 | CG6677-PE | 1..220 | 131..350 | 1179 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24014-PA | 554 | GI24014-PA | 213..554 | 9..350 | 1721 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13614-PA | 557 | GL13614-PA | 216..557 | 9..350 | 1776 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26848-PA | 557 | GA26848-PA | 216..557 | 9..350 | 1772 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26615-PA | 556 | GM26615-PA | 215..556 | 9..350 | 1840 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21115-PA | 350 | GD21115-PA | 1..350 | 1..350 | 1870 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23645-PA | 573 | GJ23645-PA | 232..573 | 9..350 | 1733 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10965-PA | 569 | GK10965-PA | 227..559 | 9..341 | 1720 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23503-PA | 626 | GE23503-PA | 285..626 | 9..350 | 1833 | 97.4 | Plus |
Translation from 76 to 1128
> SD28012.hyp MASSFTDEESSLSKNNRQKRKFPGTDSGPTGKKGRPSSDITANVKLPPHG YPLEHPFNKDGYRYILAEPDPHAPFRQEFDESSDWAGKPIPGWLYRILVP HSVLLALHDRAPQLKISEDRLAVTGERGYCMVRATHSVNRGCWYFEVTIE EMPDGAATRLGWGREYGNLQAPLGYDKFGYSWRSRKGTKFTESHGKHYSD AYVEGDTLGFLIELPEEASLDYLPNTFKDRPLVKFKSHLYYEDKDKITET LKNLHILQGSRIEFFKNGQSQGVAFEDIYAGSYFPAISIHKSATVSVNFG PAFKYPEVLVEHKAKGMHDRVEELITEQCLADTLYLTEHDGRLRLDNMGL *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ash2-PB | 350 | CG6677-PB | 1..350 | 1..350 | 1886 | 100 | Plus |
ash2-PC | 556 | CG6677-PC | 215..556 | 9..350 | 1841 | 99.4 | Plus |
ash2-PE | 220 | CG6677-PE | 1..220 | 131..350 | 1179 | 100 | Plus |