BDGP Sequence Production Resources |
Search the DGRC for TA01224
Library: | TA |
Tissue Source: | D melanogaster total adult RNA |
Created by: | |
Date Registered: | 2007-04-30 |
Comments: | |
Original Plate Number: | 12 |
Well: | 24 |
Vector: | pOTB7_DraIII |
Associated Gene/Transcript | RpS6-RB |
Protein status: | TA01224.pep: gold |
Sequenced Size: | 988 |
Gene | Date | Evidence |
---|---|---|
RpS6-RB | 2008-01-01 | Library screening |
988 bp assembled on 2010-01-12
GenBank Submission: BT120122.1
> TA01224.complete CTTTTTCAACCCTGCGCTCGCAGCCAACAGACCTCCGCCGTTTCTTTTTT TTTCTGCGTTGCGTGCAAACAGACCGACAATATGAAGCTCAACGTTTCCT ATCCCGCGACGGGATGCCAAAAGCTATTCGAAGTGGTCGACGAGCACAAG CTGCGCGTCTTCTACGAGAAGCGTATGGGACAGGTTGTGGAGGCCGATAT CCTCGGTGACGAGTGGAAGGGCTACCAGCTGCGCATCGCCGGCGGCAACG ACAAGCAGGGATTCCCCATGAAGCAGGGTGTCTTGACCCACGGCCGTGTG CGTCTGCTCCTGAAGAAGGGACACTCCTGCTACCGTCCACGCCGCACTGG CGAGCGTAAGCGCAAGTCTGTGCGTGGATGCATCGTGGACGCCAACATGT CTGTGCTGGCTCTGGTCGTCTTGAAGAAGGGTGAGAAGGACATTCCCGGT CTCACCGACACCACCATCCCACGTCGCCTGGGACCCAAGCGTGCTAGCAA GATCCGCAAGCTCTACAACTTGAGCAAGGAAGATGATGTGCGTCGCTTCG TTGTGCGTCGCCCTTTGCCCGCCAAGGACAACAAGAAGGCCACCTCCAAG GCCCCCAAAATTCAGCGCCTGATCACCCCCGTTGTGCTGCAGCGCAAGCA CCGTCGCATTGCGCTGAAGAAGAAGCGCCAGATCGCTTCCAAGGAGGCTT CCGCCGACTACGCCAAGCTGTTGGTGCAGCGCAAGAAGGAGTCCAAGGCC AAGCGCGAGGAGGCCAAGCGCCGCCGTTCTGCCTCCATTCGCGAGTCCAA GAGCTCTGTCTCCAGCGACAAGAAGTAAACACCGCGACACGGAACCCACA TTCTTCGTTTAAGCAGAAACTGAACGTTGATCACAACCAAATGATCCACG AGAGGAGAAATAAAACTTTGTAACCATTTATGTTAAATAAACGCGATAAA TGGTATCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpS6-RB | 1164 | RpS6-RB | 48..1007 | 1..960 | 4785 | 99.8 | Plus |
RpS6-RA | 1228 | RpS6-RA | 352..1226 | 86..960 | 4360 | 99.8 | Plus |
RpS6-RA | 1228 | RpS6-RA | 32..118 | 1..87 | 435 | 100 | Plus |
nc_22436.a | 547 | nc_22436.a | 385..511 | 761..886 | 370 | 87.4 | Plus |
nc_22436.a | 547 | nc_22436.a | 1..60 | 28..87 | 300 | 100 | Plus |
nc_22436.a | 547 | nc_22436.a | 307..396 | 668..757 | 270 | 86.6 | Plus |
nc_22436.a | 547 | nc_22436.a | 72..194 | 307..429 | 195 | 77.2 | Plus |
nc_22436.a | 547 | nc_22436.a | 203..273 | 468..538 | 175 | 83 | Plus |
nc_22436.a | 547 | nc_22436.a | 512..547 | 921..956 | 165 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 7791525..7792189 | 956..292 | 3310 | 99.8 | Minus |
chrX | 22417052 | chrX | 7792701..7792908 | 293..86 | 1040 | 100 | Minus |
chrX | 22417052 | chrX | 7793142..7793228 | 87..1 | 435 | 100 | Minus |
chrX | 22417052 | chrX | 7789185..7789389 | 886..668 | 415 | 81.4 | Minus |
chrX | 22417052 | chrX | 7790375..7790579 | 886..668 | 415 | 81.4 | Minus |
chrX | 22417052 | chrX | 7789502..7789624 | 429..307 | 195 | 77.2 | Minus |
chrX | 22417052 | chrX | 7790692..7790814 | 429..307 | 195 | 77.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CR11386-RB | 429 | CR11386-RB | 284..373 | 668..757 | 270 | 86.6 | Plus |
CR11386-RB | 429 | CR11386-RB | 49..171 | 307..429 | 195 | 77.2 | Plus |
CR11386-RB | 429 | CR11386-RB | 362..429 | 761..828 | 175 | 83.8 | Plus |
CR11386-RB | 429 | CR11386-RB | 180..250 | 468..538 | 175 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 7899622..7900290 | 960..292 | 3330 | 99.9 | Minus |
X | 23542271 | X | 7900802..7901009 | 293..86 | 1040 | 100 | Minus |
X | 23542271 | X | 7901243..7901329 | 87..1 | 435 | 100 | Minus |
X | 23542271 | X | 7897286..7897490 | 886..668 | 415 | 81.4 | Minus |
X | 23542271 | X | 7898476..7898680 | 886..668 | 415 | 81.4 | Minus |
X | 23542271 | X | 7897603..7897725 | 429..307 | 195 | 77.2 | Minus |
X | 23542271 | X | 7898793..7898915 | 429..307 | 195 | 77.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 7907720..7908388 | 960..292 | 3330 | 99.8 | Minus |
X | 23527363 | X | 7908900..7909107 | 293..86 | 1040 | 100 | Minus |
X | 23527363 | X | 7909341..7909427 | 87..1 | 435 | 100 | Minus |
X | 23527363 | X | 7906574..7906700 | 886..761 | 370 | 87.4 | Minus |
X | 23527363 | X | 7905384..7905510 | 886..761 | 370 | 87.4 | Minus |
X | 23527363 | X | 7906689..7906778 | 757..668 | 270 | 86.6 | Minus |
X | 23527363 | X | 7905499..7905588 | 757..668 | 270 | 86.6 | Minus |
X | 23527363 | X | 7906891..7907013 | 429..307 | 195 | 77.2 | Minus |
X | 23527363 | X | 7905701..7905823 | 429..307 | 195 | 77.2 | Minus |
X | 23527363 | X | 7906812..7906882 | 538..468 | 175 | 83 | Minus |
X | 23527363 | X | 7905622..7905692 | 538..468 | 175 | 83 | Minus |
X | 23527363 | X | 7906534..7906573 | 960..921 | 170 | 95 | Minus |
X | 23527363 | X | 7905344..7905383 | 960..921 | 170 | 95 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 7791523..7792188 | 293..958 | 99 | <- | Minus |
chrX | 7792702..7792906 | 88..292 | 100 | <- | Minus |
chrX | 7793142..7793228 | 1..87 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS6-RB | 1..747 | 82..828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS6-RB | 1..747 | 82..828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS6-RB | 1..747 | 82..828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS6-RB | 1..747 | 82..828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS6-RB | 1..958 | 1..958 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS6-RB | 1..958 | 1..958 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS6-RB | 3..960 | 1..958 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS6-RB | 3..960 | 1..958 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7899624..7900289 | 293..958 | 99 | <- | Minus |
X | 7900803..7901007 | 88..292 | 100 | <- | Minus |
X | 7901243..7901329 | 1..87 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7899624..7900289 | 293..958 | 99 | <- | Minus |
X | 7900803..7901007 | 88..292 | 100 | <- | Minus |
X | 7901243..7901329 | 1..87 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7899624..7900289 | 293..958 | 99 | <- | Minus |
X | 7900803..7901007 | 88..292 | 100 | <- | Minus |
X | 7901243..7901329 | 1..87 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 7793657..7794322 | 293..958 | 99 | <- | Minus |
arm_X | 7794836..7795040 | 88..292 | 100 | <- | Minus |
arm_X | 7795276..7795362 | 1..87 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7907722..7908387 | 293..958 | 99 | <- | Minus |
X | 7908901..7909105 | 88..292 | 100 | <- | Minus |
X | 7909341..7909427 | 1..87 | 100 | Minus |
Translation from 0 to 827
> TA01224.pep LFQPCARSQQTSAVSFFFCVACKQTDNMKLNVSYPATGCQKLFEVVDEHK LRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRV RLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPG LTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPAKDNKKATSK APKIQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKA KREEAKRRRSASIRESKSSVSSDKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21093-PA | 248 | GF21093-PA | 1..248 | 28..275 | 1252 | 96.8 | Plus |
Dana\GF10419-PA | 249 | GF10419-PA | 1..226 | 28..253 | 958 | 79.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17600-PA | 222 | GG17600-PA | 1..222 | 28..275 | 1102 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24620-PA | 248 | GH24620-PA | 1..238 | 28..265 | 1187 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpS6-PB | 248 | CG10944-PB | 1..248 | 28..275 | 1251 | 100 | Plus |
RpS6-PA | 217 | CG10944-PA | 1..217 | 59..275 | 1087 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11119-PA | 248 | GI11119-PA | 1..238 | 28..265 | 1181 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18222-PA | 236 | GL18222-PA | 2..236 | 41..275 | 1175 | 96.6 | Plus |
Dper\GL17130-PA | 218 | GL17130-PA | 1..204 | 28..256 | 667 | 63.3 | Plus |
Dper\GL25484-PA | 61 | GL25484-PA | 2..49 | 158..205 | 196 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10657-PA | 248 | GA10657-PA | 1..248 | 28..275 | 1250 | 96.8 | Plus |
Dpse\GA23494-PA | 243 | GA23494-PA | 1..229 | 28..256 | 801 | 71.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11965-PA | 246 | GM11965-PA | 1..236 | 28..265 | 980 | 81.9 | Plus |
Dsec\GM11553-PA | 144 | GM11553-PA | 5..144 | 90..275 | 330 | 51.1 | Plus |
Dsec\GM11558-PA | 144 | GM11558-PA | 5..144 | 90..275 | 330 | 51.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16145-PA | 248 | GD16145-PA | 1..248 | 28..275 | 1280 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15976-PA | 248 | GJ15976-PA | 1..248 | 28..275 | 1253 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25015-PA | 248 | GK25015-PA | 1..248 | 28..275 | 1250 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\RpS6-PA | 222 | GE17500-PA | 1..222 | 28..275 | 1102 | 87.9 | Plus |
Translation from 0 to 827
> TA01224.hyp LFQPCARSQQTSAVSFFFCVACKQTDNMKLNVSYPATGCQKLFEVVDEHK LRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRV RLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPG LTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPAKDNKKATSK APKIQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKA KREEAKRRRSASIRESKSSVSSDKK*