TA01267.complete Sequence
666 bp assembled on 2007-08-08
GenBank Submission: BT031035
> TA01267.complete
AGACATTTGATCACATCTACTTGTTGGTGTAGGATAGAAGAAAAGCAATC
CATAAATATAACGTCATGAAACTGTTAATATGGTTGTGCCTCCTCGGCTT
CCTGGCCAGTGCCTATGGCATTTTCCTGGACAAGATTACCGGTCGAGGGG
ATTCATCTGGAAACGGCCTACTAGACGATATCTTTGGACTCGAAGACTCG
GATAACAGCAGCCACAACAAAACCTCCCAACATGCATTGCCAGCGTCGGG
AATTTTTACTCCGGTTAAAGTAGCTGTTGACGTTATTCAAAATATATGGG
ATGAATTTTCTAAGGGAGTTTTAGGCCTTATGGGCAGTTTTGGTACCGGT
GATGATGGAGGCGAATCACCGCCGTCTGGGAATACAGCGCCTGTCACAAC
AGAGTCTAGTTTGCCATCGCAAGAAACCACAACGACTAGAACAACGCCGT
TTACAACAACGGAATCCAGAACGGAATCGGTCTTGGAAACAACCACAACA
GATTCATCCACGAGTACTTTGCCGCCATAAGGAGAAATTCTGTCGCCTAA
CCTTCGCATCGGATATTGCTTGTCATTGTTTGTTTCCCAGCTGCTTTCTG
TCTGGTGTATTTAAACAACGAGAATGTAAATATAAGTACCAGCCACGCTT
CCAAAAAAAAAAAAAA
TA01267.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:02:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5402-RA | 721 | CG5402-RA | 25..675 | 1..651 | 3255 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:37:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 23325013..23325351 | 651..313 | 1665 | 99.4 | Minus |
chr3R | 27901430 | chr3R | 23325601..23325915 | 315..1 | 1560 | 99.7 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:59:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:37:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27502091..27502429 | 651..313 | 1695 | 100 | Minus |
3R | 32079331 | 3R | 27502679..27502993 | 315..1 | 1575 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:57:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 27242922..27243260 | 651..313 | 1695 | 100 | Minus |
3R | 31820162 | 3R | 27243510..27243824 | 315..1 | 1575 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 21:37:10 has no hits.
TA01267.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:38:16 Download gff for
TA01267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 23325602..23325915 | 1..314 | 99 | | Minus |
chr3R | 23325012..23325349 | 315..652 | 99 | <- | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 21:11:34 Download gff for
TA01267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5402-RA | 1..465 | 66..530 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:00:03 Download gff for
TA01267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5402-RA | 1..465 | 66..530 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:03:11 Download gff for
TA01267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5402-RA | 1..465 | 66..530 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:59:33 Download gff for
TA01267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5402-RA | 1..465 | 66..530 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:25:41 Download gff for
TA01267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5402-RA | 1..465 | 66..530 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:25:13 Download gff for
TA01267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5402-RA | 1..613 | 38..650 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:00:02 Download gff for
TA01267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5402-RA | 1..613 | 38..650 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:03:11 Download gff for
TA01267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5402-RA | 1..614 | 38..652 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:59:34 Download gff for
TA01267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5402-RA | 1..613 | 38..650 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:25:41 Download gff for
TA01267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5402-RA | 1..614 | 38..652 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:38:16 Download gff for
TA01267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27502090..27502427 | 315..652 | 99 | <- | Minus |
3R | 27502680..27502993 | 1..314 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:38:16 Download gff for
TA01267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27502090..27502427 | 315..652 | 99 | <- | Minus |
3R | 27502680..27502993 | 1..314 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:38:16 Download gff for
TA01267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27502090..27502427 | 315..652 | 99 | <- | Minus |
3R | 27502680..27502993 | 1..314 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:03:11 Download gff for
TA01267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 23327812..23328149 | 315..652 | 99 | <- | Minus |
arm_3R | 23328402..23328715 | 1..314 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:35:34 Download gff for
TA01267.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27242921..27243258 | 315..652 | 99 | <- | Minus |
3R | 27243511..27243824 | 1..314 | 100 | | Minus |
TA01267.hyp Sequence
Translation from 65 to 529
> TA01267.hyp
MKLLIWLCLLGFLASAYGIFLDKITGRGDSSGNGLLDDIFGLEDSDNSSH
NKTSQHALPASGIFTPVKVAVDVIQNIWDEFSKGVLGLMGSFGTGDDGGE
SPPSGNTAPVTTESSLPSQETTTTRTTPFTTTESRTESVLETTTTDSSTS
TLPP*
TA01267.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:07:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5402-PA | 154 | CG5402-PA | 1..154 | 1..154 | 795 | 100 | Plus |
TA01267.pep Sequence
Translation from 65 to 529
> TA01267.pep
MKLLIWLCLLGFLASAYGIFLDKITGRGDSSGNGLLDDIFGLEDSDNSSH
NKTSQHALPASGIFTPVKVAVDVIQNIWDEFSKGVLGLMGSFGTGDDGGE
SPPSGNTAPVTTESSLPSQETTTTRTTPFTTTESRTESVLETTTTDSSTS
TLPP*
TA01267.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:40:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF18709-PA | 203 | GF18709-PA | 1..129 | 1..122 | 174 | 38.1 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:40:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG12113-PA | 151 | GG12113-PA | 1..151 | 1..154 | 480 | 71.4 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:27:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5402-PA | 154 | CG5402-PA | 1..154 | 1..154 | 795 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:40:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM10105-PA | 154 | GM10105-PA | 1..154 | 1..154 | 571 | 87 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:40:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD18077-PA | 155 | GD18077-PA | 1..155 | 1..154 | 528 | 87.7 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:40:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE10561-PA | 151 | GE10561-PA | 1..96 | 1..105 | 265 | 57.8 | Plus |