TA01382.complete Sequence
488 bp assembled on 2007-08-08
GenBank Submission: BT031037
> TA01382.complete
GTCAACTTGAAAAATGCGAACGGTGCCCATCTTGTTGCTAATTTGCTGCC
TAGGCTGGTTACACAAAGGCCAAGCTGACGAAAGGAAGATTGGCGCTGTG
GGTCCGCCTATGAAACAGAGGAGTCTTCGACATGTAAGCTCCTTTGCTAA
TCCAGGGCAACCGGGTAGACCTGGCAGCGGAAGACCAGGACGACCTGGTC
AGGGAATGCCTGGCCGACCTGGGCGTCCAGGAGGATCAGGTGGAGCTGGA
GGAGCCGGAGGAAGTGGAGGTGATGGAGGAGCAGGTGGGGCTGGCGCACG
ACCAGTAAGAGGAGGGTATTGGAGGAAAGGTATTTCATTGGGTCAAAGGC
GACCAGAGCCAAGGTCAAAATATTATTTGTATTGAATCAAATTTTAAAGT
GTATAGAAACTGTTGCTTAAAAATGTGTAACATATTATAAATAAATTAAA
GAATATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
TA01382.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:02:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42521-RA | 544 | CG42521-RA | 37..499 | 1..463 | 2300 | 99.7 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:31:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 10614459..10614849 | 457..67 | 1835 | 98 | Minus |
chr3L | 24539361 | chr3L | 10614901..10614969 | 69..1 | 345 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:59:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:31:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 10623060..10623456 | 463..67 | 1970 | 99.7 | Minus |
3L | 28110227 | 3L | 10623508..10623576 | 69..1 | 345 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:57:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 10616160..10616556 | 463..67 | 1970 | 99.7 | Minus |
3L | 28103327 | 3L | 10616608..10616676 | 69..1 | 345 | 100 | Minus |
Blast to na_te.dros performed 2019-03-16 16:31:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
blood | 7410 | blood BLOOD 7410bp | 6835..6929 | 458..368 | 131 | 65.6 | Minus |
Quasimodo | 7387 | Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. | 6536..6617 | 455..374 | 113 | 59.8 | Minus |
TA01382.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:32:18 Download gff for
TA01382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 10614490..10614600 | 316..426 | 99 | == | Minus |
chr3L | 10614688..10614847 | 69..228 | 98 | <- | Minus |
chr3L | 10614902..10614969 | 1..68 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 21:11:37 Download gff for
TA01382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34237-RA | 520..672 | 156..308 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:00:06 Download gff for
TA01382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42521-RA | 1..372 | 14..385 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:15:42 Download gff for
TA01382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42521-RA | 1..372 | 14..385 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:59:37 Download gff for
TA01382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34237-RA | 520..672 | 156..308 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:31:43 Download gff for
TA01382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42521-RA | 1..372 | 14..385 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:25:19 Download gff for
TA01382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34237-RA | 520..672 | 156..308 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:00:06 Download gff for
TA01382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42521-RA | 1..457 | 1..457 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:15:42 Download gff for
TA01382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42521-RA | 1..457 | 1..457 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:59:37 Download gff for
TA01382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34237-RA | 520..672 | 156..308 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:31:43 Download gff for
TA01382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42521-RA | 1..457 | 1..457 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:32:18 Download gff for
TA01382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 10623065..10623454 | 69..458 | 99 | <- | Minus |
3L | 10623509..10623576 | 1..68 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:32:18 Download gff for
TA01382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 10623065..10623454 | 69..458 | 99 | <- | Minus |
3L | 10623509..10623576 | 1..68 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:32:18 Download gff for
TA01382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 10623065..10623454 | 69..458 | 99 | <- | Minus |
3L | 10623509..10623576 | 1..68 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:15:42 Download gff for
TA01382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 10616165..10616554 | 69..458 | 99 | <- | Minus |
arm_3L | 10616609..10616676 | 1..68 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:35:37 Download gff for
TA01382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 10616165..10616554 | 69..458 | 99 | <- | Minus |
3L | 10616609..10616676 | 1..68 | 100 | | Minus |
TA01382.hyp Sequence
Translation from 13 to 384
> TA01382.hyp
MRTVPILLLICCLGWLHKGQADERKIGAVGPPMKQRSLRHVSSFANPGQP
GRPGSGRPGRPGQGMPGRPGRPGGSGGAGGAGGSGGDGGAGGAGARPVRG
GYWRKGISLGQRRPEPRSKYYLY*
TA01382.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:21:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42521-PA | 123 | CG42521-PA | 1..123 | 1..123 | 681 | 100 | Plus |
Mur82C-PB | 578 | CG12586-PB | 385..488 | 16..117 | 150 | 37.5 | Plus |
lcs-PA | 145 | CG12794-PA | 29..92 | 47..101 | 148 | 51.6 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 329..410 | 46..106 | 146 | 43.9 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 329..410 | 46..106 | 146 | 43.9 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 395..485 | 47..118 | 144 | 41.8 | Plus |
TA01382.pep Sequence
Translation from 13 to 384
> TA01382.pep
MRTVPILLLICCLGWLHKGQADERKIGAVGPPMKQRSLRHVSSFANPGQP
GRPGSGRPGRPGQGMPGRPGRPGGSGGAGGAGGSGGDGGAGGAGARPVRG
GYWRKGISLGQRRPEPRSKYYLY*
TA01382.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:18:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42521-PA | 123 | CG42521-PA | 1..123 | 1..123 | 681 | 100 | Plus |
Mur82C-PB | 578 | CG12586-PB | 385..488 | 16..117 | 150 | 37.5 | Plus |
lcs-PA | 145 | CG12794-PA | 29..92 | 47..101 | 148 | 51.6 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 329..410 | 46..106 | 146 | 43.9 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 329..410 | 46..106 | 146 | 43.9 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 395..485 | 47..118 | 144 | 41.8 | Plus |