Clone TA01382 Report

Search the DGRC for TA01382

Clone and Library Details

Library:TA
Tissue Source:D melanogaster total adult RNA
Created by: 
Date Registered:2007-04-30
Comments: 
Original Plate Number:13
Well:82
Vector:pOTB7_DraIII
Associated Gene/TranscriptCG42521-RA
Protein status:TA01382.pep: gold
Sequenced Size:488

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG34237 2008-04-29 Release 5.5 accounting

Clone Sequence Records

TA01382.complete Sequence

488 bp assembled on 2007-08-08

GenBank Submission: BT031037

> TA01382.complete
GTCAACTTGAAAAATGCGAACGGTGCCCATCTTGTTGCTAATTTGCTGCC
TAGGCTGGTTACACAAAGGCCAAGCTGACGAAAGGAAGATTGGCGCTGTG
GGTCCGCCTATGAAACAGAGGAGTCTTCGACATGTAAGCTCCTTTGCTAA
TCCAGGGCAACCGGGTAGACCTGGCAGCGGAAGACCAGGACGACCTGGTC
AGGGAATGCCTGGCCGACCTGGGCGTCCAGGAGGATCAGGTGGAGCTGGA
GGAGCCGGAGGAAGTGGAGGTGATGGAGGAGCAGGTGGGGCTGGCGCACG
ACCAGTAAGAGGAGGGTATTGGAGGAAAGGTATTTCATTGGGTCAAAGGC
GACCAGAGCCAAGGTCAAAATATTATTTGTATTGAATCAAATTTTAAAGT
GTATAGAAACTGTTGCTTAAAAATGTGTAACATATTATAAATAAATTAAA
GAATATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

TA01382.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:02:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG42521-RA 544 CG42521-RA 37..499 1..463 2300 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:31:22
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 10614459..10614849 457..67 1835 98 Minus
chr3L 24539361 chr3L 10614901..10614969 69..1 345 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:59:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:31:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 10623060..10623456 463..67 1970 99.7 Minus
3L 28110227 3L 10623508..10623576 69..1 345 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:57:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 10616160..10616556 463..67 1970 99.7 Minus
3L 28103327 3L 10616608..10616676 69..1 345 100 Minus
Blast to na_te.dros performed 2019-03-16 16:31:20
Subject Length Description Subject Range Query Range Score Percent Strand
blood 7410 blood BLOOD 7410bp 6835..6929 458..368 131 65.6 Minus
Quasimodo 7387 Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. 6536..6617 455..374 113 59.8 Minus

TA01382.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:32:18 Download gff for TA01382.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 10614490..10614600 316..426 99 == Minus
chr3L 10614688..10614847 69..228 98 <- Minus
chr3L 10614902..10614969 1..68 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 21:11:37 Download gff for TA01382.complete
Subject Subject Range Query Range Percent Splice Strand
CG34237-RA 520..672 156..308 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:00:06 Download gff for TA01382.complete
Subject Subject Range Query Range Percent Splice Strand
CG42521-RA 1..372 14..385 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:15:42 Download gff for TA01382.complete
Subject Subject Range Query Range Percent Splice Strand
CG42521-RA 1..372 14..385 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:59:37 Download gff for TA01382.complete
Subject Subject Range Query Range Percent Splice Strand
CG34237-RA 520..672 156..308 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:31:43 Download gff for TA01382.complete
Subject Subject Range Query Range Percent Splice Strand
CG42521-RA 1..372 14..385 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:25:19 Download gff for TA01382.complete
Subject Subject Range Query Range Percent Splice Strand
CG34237-RA 520..672 156..308 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:00:06 Download gff for TA01382.complete
Subject Subject Range Query Range Percent Splice Strand
CG42521-RA 1..457 1..457 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:15:42 Download gff for TA01382.complete
Subject Subject Range Query Range Percent Splice Strand
CG42521-RA 1..457 1..457 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:59:37 Download gff for TA01382.complete
Subject Subject Range Query Range Percent Splice Strand
CG34237-RA 520..672 156..308 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:31:43 Download gff for TA01382.complete
Subject Subject Range Query Range Percent Splice Strand
CG42521-RA 1..457 1..457 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:32:18 Download gff for TA01382.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10623065..10623454 69..458 99 <- Minus
3L 10623509..10623576 1..68 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:32:18 Download gff for TA01382.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10623065..10623454 69..458 99 <- Minus
3L 10623509..10623576 1..68 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:32:18 Download gff for TA01382.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10623065..10623454 69..458 99 <- Minus
3L 10623509..10623576 1..68 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:15:42 Download gff for TA01382.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 10616165..10616554 69..458 99 <- Minus
arm_3L 10616609..10616676 1..68 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:35:37 Download gff for TA01382.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10616165..10616554 69..458 99 <- Minus
3L 10616609..10616676 1..68 100   Minus

TA01382.hyp Sequence

Translation from 13 to 384

> TA01382.hyp
MRTVPILLLICCLGWLHKGQADERKIGAVGPPMKQRSLRHVSSFANPGQP
GRPGSGRPGRPGQGMPGRPGRPGGSGGAGGAGGSGGDGGAGGAGARPVRG
GYWRKGISLGQRRPEPRSKYYLY*

TA01382.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:21:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG42521-PA 123 CG42521-PA 1..123 1..123 681 100 Plus
Mur82C-PB 578 CG12586-PB 385..488 16..117 150 37.5 Plus
lcs-PA 145 CG12794-PA 29..92 47..101 148 51.6 Plus
Cpr47Ef-PD 601 CG13214-PD 329..410 46..106 146 43.9 Plus
Cpr47Ef-PC 612 CG13214-PC 329..410 46..106 146 43.9 Plus
Cpr47Ef-PD 601 CG13214-PD 395..485 47..118 144 41.8 Plus

TA01382.pep Sequence

Translation from 13 to 384

> TA01382.pep
MRTVPILLLICCLGWLHKGQADERKIGAVGPPMKQRSLRHVSSFANPGQP
GRPGSGRPGRPGQGMPGRPGRPGGSGGAGGAGGSGGDGGAGGAGARPVRG
GYWRKGISLGQRRPEPRSKYYLY*

TA01382.pep Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:18:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG42521-PA 123 CG42521-PA 1..123 1..123 681 100 Plus
Mur82C-PB 578 CG12586-PB 385..488 16..117 150 37.5 Plus
lcs-PA 145 CG12794-PA 29..92 47..101 148 51.6 Plus
Cpr47Ef-PD 601 CG13214-PD 329..410 46..106 146 43.9 Plus
Cpr47Ef-PC 612 CG13214-PC 329..410 46..106 146 43.9 Plus
Cpr47Ef-PD 601 CG13214-PD 395..485 47..118 144 41.8 Plus