TA01551.complete Sequence
591 bp assembled on 2007-08-08
GenBank Submission: BT031045
> TA01551.complete
CCCCTTTTCTTTTTGCTGCGCTTCCGGAGAAGTCGTCTTTGCTAGAAGCC
ACGTGCTAAATTTGTAGCTTGCAAGTTTCGTTCGATTCTTAAACCGTTCG
CCACGAGAGATGACGAAGGGTACCTCCAGCTTTGGTAAGCGCCACAATAA
GACGCACACCCTGTGCCGTCGCTGTGGCCGCTCCTCCTACCACATCCAGA
AGTCCACTTGCGCCCAGTGCGGCTACCCCGCCGCCAAGTTGCGTTCCTAC
AACTGGTCCGTGAAGGCCAAGAGGAGGAAGACCACCGGCACCGGTCGCAT
GCAGCACCTGAAGGTTGTGCGCCGCCGTTTCCGCAACGGATTCCGCGAGG
GCACCCAGGCCAAGCCCAAGAAGGCCGTGGCCAGCAAGTAGGAGGCTCTG
TGTGTCCCAAGATGTATATCCCACACCGGGCTATATGGACGGAGATAGCA
GCTGCTCCCTTAACCGCAGATAACGACAGCCTCCAGTTGATCAACGTGTA
CACACCATCTAAAATCCACTGAAAATGGCCCCTCAACATGGCTAATAAAT
CGCTCGAGCGCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
TA01551.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:02:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL37a-RA | 1226 | RpL37a-RA | 55..621 | 2..568 | 2805 | 99.6 | Plus |
RpL37b-RA | 403 | RpL37b-RA | 85..248 | 108..271 | 250 | 76.8 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:21:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 15028750..15029062 | 561..249 | 1565 | 100 | Minus |
chrX | 22417052 | chrX | 15029128..15029264 | 248..112 | 685 | 100 | Minus |
chrX | 22417052 | chrX | 15029401..15029511 | 112..2 | 555 | 100 | Minus |
chr2R | 21145070 | chr2R | 18986598..18986832 | 342..108 | 245 | 73.6 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:59:40 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:21:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15138594..15138913 | 568..249 | 1570 | 99.4 | Minus |
X | 23542271 | X | 15138979..15139115 | 248..112 | 685 | 100 | Minus |
X | 23542271 | X | 15139252..15139362 | 112..2 | 555 | 100 | Minus |
2R | 25286936 | 2R | 23100141..23100375 | 342..108 | 275 | 74.5 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:58:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 15146692..15147011 | 568..249 | 1570 | 99.3 | Minus |
X | 23527363 | X | 15147077..15147213 | 248..112 | 685 | 100 | Minus |
X | 23527363 | X | 15147350..15147460 | 112..2 | 555 | 100 | Minus |
2R | 25260384 | 2R | 23101411..23101574 | 271..108 | 250 | 76.8 | Minus |
Blast to na_te.dros performed on 2019-03-15 18:21:17 has no hits.
TA01551.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:22:13 Download gff for
TA01551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 15028749..15029062 | 249..562 | 99 | <- | Minus |
chrX | 15029128..15029263 | 113..248 | 100 | <- | Minus |
chrX | 15029401..15029511 | 1..112 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 21:11:46 Download gff for
TA01551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL37a-RA | 1..282 | 110..391 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:00:17 Download gff for
TA01551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL37a-RA | 1..282 | 110..391 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:59:55 Download gff for
TA01551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL37a-RA | 1..282 | 110..391 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:59:49 Download gff for
TA01551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL37a-RA | 1..282 | 110..391 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:59:05 Download gff for
TA01551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL37a-RA | 1..282 | 110..391 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:25:30 Download gff for
TA01551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL37a-RA | 28..588 | 1..562 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:00:17 Download gff for
TA01551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL37a-RA | 28..588 | 1..562 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:59:55 Download gff for
TA01551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL37a-RA | 5..565 | 1..562 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:59:50 Download gff for
TA01551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL37a-RA | 28..588 | 1..562 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:59:05 Download gff for
TA01551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL37a-RA | 5..565 | 1..562 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:22:13 Download gff for
TA01551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15138600..15138913 | 249..562 | 99 | <- | Minus |
X | 15138979..15139114 | 113..248 | 100 | <- | Minus |
X | 15139252..15139362 | 1..112 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:22:13 Download gff for
TA01551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15138600..15138913 | 249..562 | 99 | <- | Minus |
X | 15138979..15139114 | 113..248 | 100 | <- | Minus |
X | 15139252..15139362 | 1..112 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:22:13 Download gff for
TA01551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15138600..15138913 | 249..562 | 99 | <- | Minus |
X | 15138979..15139114 | 113..248 | 100 | <- | Minus |
X | 15139252..15139362 | 1..112 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:59:55 Download gff for
TA01551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15033285..15033395 | 1..112 | 99 | | Minus |
arm_X | 15032633..15032946 | 249..562 | 99 | <- | Minus |
arm_X | 15033012..15033147 | 113..248 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:35:45 Download gff for
TA01551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15146698..15147011 | 249..562 | 99 | <- | Minus |
X | 15147077..15147212 | 113..248 | 100 | <- | Minus |
X | 15147350..15147460 | 1..112 | 99 | | Minus |
TA01551.hyp Sequence
Translation from 109 to 390
> TA01551.hyp
MTKGTSSFGKRHNKTHTLCRRCGRSSYHIQKSTCAQCGYPAAKLRSYNWS
VKAKRRKTTGTGRMQHLKVVRRRFRNGFREGTQAKPKKAVASK*
TA01551.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:57:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL37a-PB | 93 | CG9091-PB | 1..93 | 1..93 | 500 | 100 | Plus |
RpL37a-PA | 93 | CG9091-PA | 1..93 | 1..93 | 500 | 100 | Plus |
RpL37b-PA | 89 | CG9873-PA | 1..87 | 1..87 | 372 | 77 | Plus |
TA01551.pep Sequence
Translation from 109 to 390
> TA01551.pep
MTKGTSSFGKRHNKTHTLCRRCGRSSYHIQKSTCAQCGYPAAKLRSYNWS
VKAKRRKTTGTGRMQHLKVVRRRFRNGFREGTQAKPKKAVASK*
TA01551.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:43:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF21054-PA | 105 | GF21054-PA | 13..103 | 2..92 | 449 | 94.5 | Plus |
Dana\GF13322-PA | 90 | GF13322-PA | 1..89 | 1..89 | 324 | 71.9 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:43:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG19417-PA | 94 | GG19417-PA | 1..92 | 1..92 | 467 | 97.8 | Plus |
Dere\GG20067-PA | 89 | GG20067-PA | 1..81 | 1..81 | 341 | 79 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:43:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH24309-PA | 106 | GH24309-PA | 15..106 | 2..93 | 461 | 97.8 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL37a-PB | 93 | CG9091-PB | 1..93 | 1..93 | 500 | 100 | Plus |
RpL37a-PA | 93 | CG9091-PA | 1..93 | 1..93 | 500 | 100 | Plus |
RpL37b-PA | 89 | CG9873-PA | 1..87 | 1..87 | 372 | 77 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:43:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI21554-PA | 105 | GI21554-PA | 14..105 | 2..93 | 447 | 94.6 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:43:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL13157-PA | 64 | GL13157-PA | 1..62 | 31..92 | 287 | 91.9 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:43:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM12004-PA | 94 | GM12004-PA | 1..92 | 1..92 | 467 | 97.8 | Plus |
Dsec\GM15582-PA | 89 | GM15582-PA | 1..85 | 1..85 | 344 | 77.6 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:43:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ15698-PA | 96 | GJ15698-PA | 5..96 | 2..93 | 452 | 95.7 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:43:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK16414-PA | 94 | GK16414-PA | 1..90 | 1..90 | 451 | 95.6 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:43:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE16068-PA | 94 | GE16068-PA | 1..92 | 1..92 | 467 | 97.8 | Plus |
Dyak\GE11606-PA | 89 | GE11606-PA | 1..87 | 1..87 | 346 | 74.7 | Plus |