Clone TB01391 Report

Search the DGRC for TB01391

Clone and Library Details

Library:TB
Tissue Source:D melanogaster total adult RNA, size selected for >1.5kb
Created by: 
Date Registered:2007-12-19
Comments: 
Original Plate Number:13
Well:91
Vector:pOTB7_DraIII
Associated Gene/TranscriptSems-RA
Protein status:TB01391.pep: gold
Sequenced Size:912

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10586-RA 2008-01-01 Library screening

Clone Sequence Records

TB01391.complete Sequence

912 bp assembled on 2009-03-27

GenBank Submission: BT081381.1

> TB01391.complete
AAAAAATCCATTCAGTGCTCGGCATGAAACGTCTTCTATTTCTCTTTCTG
CTTGCTGGTATTTTAATAAACAATCATGCCCTGCAGCACAACGAGACCAT
TGACTTGAAAAAGTTGGCCAAAATAGTGCTGCCTCCGGCTTATCAAACCC
GTGTTATTGGTGGTCGGGTGACCACCAACGCGAAATTGGGCGGATACCTG
GTGGCAATGCGGTACTTCAATAATTTCATCTGCGGCGGTACTTTAATCCA
TGAGCTCATTGTCCTCACGGCGGCGCACTGTTTTGAGGACCGAGCAGAAA
AGGAAGCCTGGAGCGTGGATGGTGGCATCTCCAGACTCAGCGAAAAAGGC
ATTCGTCGTCAAGTTAAGCGCTTCATTAAGTCGGCCCAGTTTAAAATGGT
CACCATGAACATGGACGTGGCTGTGGTGCTACTGAATCGACCGATGGTTG
GAAAAAACATCGGAACTCTATCCTTGTGCAGTACGGCCTTGACTCCGGGA
CAGACAATGGACGTATCCGGCTGGGGAATGACAAATCCGGATGACGAGGG
TCCGGGGCATATGCTCCGCACGGTATCAGTACCTGTGATTGAAAAAAGAA
TATGCCGCGAAGCCTATCGGGAATCAGTCTCCATATCGGATAGCATGTTT
TGTGCCTCAGTTTTGGGAAAAAAGGATGCTTGCACCTACGACTCAGGAGG
TCCCTTGGTTTACGAAAAACAAGTCTGCGGCATTGTGTCCTTTGGGATCG
GATGTGCGAGCAGGCGTTATCCCGGTGTCTATACGGATGTTCATTACGTA
AAGCCATTTATTGTAAAAGGCATCAAAGCTTTGCTCTCCCGTTCCAGGTA
ACTGAAATAAACTTTTTGCATTAAGATACTGCAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

TB01391.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:28:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG10586-RA 957 CG10586-RA 3..884 3..884 4410 100 Plus
CG10586.a 916 CG10586.a 3..848 3..848 4230 100 Plus
CG11037-RA 1073 CG11037-RA 789..952 672..835 340 80.4 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:48:13
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 20945130..20945754 627..3 3125 100 Minus
chr3L 24539361 chr3L 20944762..20945019 882..625 1290 100 Minus
chr3L 24539361 chr3L 20949447..20949610 835..672 340 80.5 Minus
chr3L 24539361 chr3L 20950627..20950769 787..645 280 79.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:59:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:48:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20956126..20956750 627..3 3125 100 Minus
3L 28110227 3L 20955756..20956015 884..625 1300 100 Minus
3L 28110227 3L 20960443..20960606 835..672 340 80.5 Minus
3L 28110227 3L 20961623..20961765 787..645 280 79.7 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:44:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 20949226..20949850 627..3 3125 100 Minus
3L 28103327 3L 20948856..20949115 884..625 1300 100 Minus
3L 28103327 3L 20953543..20953706 835..672 340 80.4 Minus
3L 28103327 3L 20954723..20954865 787..645 280 79.7 Minus
Blast to na_te.dros performed 2019-03-15 18:48:12
Subject Length Description Subject Range Query Range Score Percent Strand
Tabor 7345 Tabor TABOR 7345bp 1844..1873 59..30 114 86.7 Minus
G4 3856 G4 G4_DM 3856bp 2264..2303 68..28 112 78 Minus

TB01391.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:49:12 Download gff for TB01391.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 20944762..20945016 628..882 100 <- Minus
chr3L 20945130..20945754 1..627 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:07:54 Download gff for TB01391.complete
Subject Subject Range Query Range Percent Splice Strand
CG10586-RA 1..828 24..851 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:42:13 Download gff for TB01391.complete
Subject Subject Range Query Range Percent Splice Strand
CG10586-RA 1..828 24..851 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:31:58 Download gff for TB01391.complete
Subject Subject Range Query Range Percent Splice Strand
Sems-RA 1..828 24..851 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:01:26 Download gff for TB01391.complete
Subject Subject Range Query Range Percent Splice Strand
Sems-RA 1..828 24..851 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-03-27 14:26:36 Download gff for TB01391.complete
Subject Subject Range Query Range Percent Splice Strand
CG10586-RA 1..828 24..851 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:42:13 Download gff for TB01391.complete
Subject Subject Range Query Range Percent Splice Strand
CG10586-RA 1..880 3..882 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:31:58 Download gff for TB01391.complete
Subject Subject Range Query Range Percent Splice Strand
Sems-RA 1..880 3..882 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:01:26 Download gff for TB01391.complete
Subject Subject Range Query Range Percent Splice Strand
Sems-RA 1..880 3..882 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:49:12 Download gff for TB01391.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20955758..20956012 628..882 100 <- Minus
3L 20956126..20956750 1..627 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:49:12 Download gff for TB01391.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20955758..20956012 628..882 100 <- Minus
3L 20956126..20956750 1..627 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:49:12 Download gff for TB01391.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20955758..20956012 628..882 100 <- Minus
3L 20956126..20956750 1..627 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:31:58 Download gff for TB01391.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20948858..20949112 628..882 100 <- Minus
arm_3L 20949226..20949850 1..627 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:16:55 Download gff for TB01391.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20948858..20949112 628..882 100 <- Minus
3L 20949226..20949850 1..627 99   Minus

TB01391.hyp Sequence

Translation from 2 to 850

> TB01391.hyp
KIHSVLGMKRLLFLFLLAGILINNHALQHNETIDLKKLAKIVLPPAYQTR
VIGGRVTTNAKLGGYLVAMRYFNNFICGGTLIHELIVLTAAHCFEDRAEK
EAWSVDGGISRLSEKGIRRQVKRFIKSAQFKMVTMNMDVAVVLLNRPMVG
KNIGTLSLCSTALTPGQTMDVSGWGMTNPDDEGPGHMLRTVSVPVIEKRI
CREAYRESVSISDSMFCASVLGKKDACTYDSGGPLVYEKQVCGIVSFGIG
CASRRYPGVYTDVHYVKPFIVKGIKALLSRSR*

TB01391.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:56:15
Subject Length Description Subject Range Query Range Score Percent Strand
Sems-PA 275 CG10586-PA 1..275 8..282 1425 100 Plus
CG11037-PA 292 CG11037-PA 41..291 30..280 871 66.5 Plus
CG10587-PA 276 CG10587-PA 1..275 8..280 855 59.6 Plus
CG10587-PC 289 CG10587-PC 1..288 8..280 831 56.9 Plus
CG10587-PD 225 CG10587-PD 1..200 8..205 554 54.5 Plus

TB01391.pep Sequence

Translation from 2 to 850

> TB01391.pep
KIHSVLGMKRLLFLFLLAGILINNHALQHNETIDLKKLAKIVLPPAYQTR
VIGGRVTTNAKLGGYLVAMRYFNNFICGGTLIHELIVLTAAHCFEDRAEK
EAWSVDGGISRLSEKGIRRQVKRFIKSAQFKMVTMNMDVAVVLLNRPMVG
KNIGTLSLCSTALTPGQTMDVSGWGMTNPDDEGPGHMLRTVSVPVIEKRI
CREAYRESVSISDSMFCASVLGKKDACTYDSGGPLVYEKQVCGIVSFGIG
CASRRYPGVYTDVHYVKPFIVKGIKALLSRSR*

TB01391.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 10:58:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10198-PA 272 GF10198-PA 9..272 11..278 854 58.6 Plus
Dana\GF10197-PA 277 GF10197-PA 25..275 30..279 801 59 Plus
Dana\GF10196-PA 263 GF10196-PA 19..262 36..279 757 57.8 Plus
Dana\GF13344-PA 260 GF13344-PA 34..259 48..275 536 43 Plus
Dana\GF24381-PA 250 GF24381-PA 24..249 48..275 450 40.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 10:59:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13274-PA 273 GG13274-PA 1..272 8..279 1131 79.4 Plus
Dere\GG13272-PA 276 GG13272-PA 25..275 30..280 872 61.4 Plus
Dere\GG13273-PA 292 GG13273-PA 40..291 29..280 870 64.3 Plus
Dere\GG23011-PA 246 GG23011-PA 20..245 48..275 510 42.1 Plus
Dere\GG14278-PA 248 GG14278-PA 22..246 48..274 444 40.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 10:59:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15562-PA 274 GH15562-PA 18..272 30..279 668 53.7 Plus
Dgri\GH15252-PA 261 GH15252-PA 49..259 65..274 456 43.4 Plus
Dgri\GH15251-PA 253 GH15251-PA 13..253 42..279 418 39.5 Plus
Dgri\GH15247-PA 255 GH15247-PA 28..248 48..271 387 40 Plus
Dgri\GH15245-PA 343 GH15245-PA 145..341 76..274 356 41 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:43:50
Subject Length Description Subject Range Query Range Score Percent Strand
Sems-PA 275 CG10586-PA 1..275 8..282 1425 100 Plus
CG11037-PA 292 CG11037-PA 41..291 30..280 871 66.5 Plus
CG10587-PA 276 CG10587-PA 1..275 8..280 855 59.6 Plus
CG10587-PC 289 CG10587-PC 1..288 8..280 831 56.9 Plus
CG10587-PD 225 CG10587-PD 1..200 8..205 554 54.5 Plus
CG3650-PA 249 CG3650-PA 23..248 48..275 514 42.5 Plus
CG32271-PA 248 CG32271-PA 23..246 49..274 442 40.3 Plus
CG33159-PA 257 CG33159-PA 13..239 38..263 404 40.4 Plus
CG32270-PA 259 CG32270-PA 30..255 50..274 369 37.7 Plus
CG32269-PB 332 CG32269-PB 106..318 48..263 367 38.7 Plus
CG32269-PA 332 CG32269-PA 106..318 48..263 367 38.7 Plus
CG33160-PA 258 CG33160-PA 31..255 48..275 354 36.8 Plus
CG32376-PA 291 CG32376-PA 61..288 46..274 314 35 Plus
etaTry-PA 262 CG12386-PA 27..256 50..272 311 34.3 Plus
Try29F-PD 267 CG9564-PD 9..267 7..274 304 36 Plus
Try29F-PC 267 CG9564-PC 9..267 7..274 304 36 Plus
CG13430-PB 267 CG13430-PB 31..267 50..278 303 33.2 Plus
CG13430-PA 267 CG13430-PA 31..267 50..278 303 33.2 Plus
lambdaTry-PA 272 CG12350-PA 1..260 8..274 300 30.9 Plus
CG31954-PA 277 CG31954-PA 14..271 14..270 300 31.3 Plus
CG34129-PA 314 CG34129-PA 39..263 50..272 299 33.8 Plus
CG8299-PA 260 CG8299-PA 26..246 49..264 297 34.4 Plus
betaTry-PB 253 CG18211-PB 23..250 43..271 287 31.2 Plus
betaTry-PA 253 CG18211-PA 23..250 43..271 287 31.2 Plus
CG11192-PB 279 CG11192-PB 27..265 50..276 286 33.2 Plus
zetaTry-PA 280 CG12387-PA 38..273 50..270 286 30.7 Plus
CG6048-PA 362 CG6048-PA 45..288 50..274 285 34.9 Plus
gammaTry-PA 253 CG30028-PA 23..250 43..271 284 30.3 Plus
CG30025-PA 253 CG30025-PA 23..250 43..271 284 30.3 Plus
deltaTry-PA 253 CG12351-PA 23..250 43..271 284 30.3 Plus
CG30031-PA 253 CG30031-PA 23..250 43..271 284 30.3 Plus
alphaTry-PA 256 CG18444-PA 23..250 43..271 284 31.6 Plus
CG17239-PB 248 CG17239-PB 23..244 50..277 281 35.4 Plus
CG17239-PA 248 CG17239-PA 23..244 50..277 281 35.4 Plus
Ser12-PA 245 CG17240-PA 23..245 50..277 280 33.5 Plus
CG14780-PA 302 CG14780-PA 8..270 7..270 279 33.8 Plus
CG32374-PA 299 CG32374-PA 72..297 49..275 277 32.6 Plus
CG7829-PA 253 CG7829-PA 27..245 50..270 273 30 Plus
epsilonTry-PA 256 CG18681-PA 23..249 43..270 270 32 Plus
l(2)k05911-PC 639 CG31728-PC 397..639 48..275 268 32.8 Plus
iotaTry-PA 252 CG7754-PA 27..252 50..277 267 32.5 Plus
CG16998-PA 258 CG16998-PA 22..233 48..261 267 35.3 Plus
thetaTry-PA 262 CG12385-PA 34..262 50..277 263 33.3 Plus
CG4815-PA 265 CG4815-PA 31..263 47..277 262 29.4 Plus
CG11664-PA 254 CG11664-PA 35..253 64..282 259 29.8 Plus
CG11836-PI 281 CG11836-PI 42..275 48..275 259 32.1 Plus
CG11836-PJ 333 CG11836-PJ 94..327 48..275 259 32.1 Plus
CG10405-PB 268 CG10405-PB 12..265 16..277 258 29 Plus
CG32277-PA 261 CG32277-PA 24..259 48..280 257 32 Plus
CG17571-PB 258 CG17571-PB 57..252 77..271 255 37.7 Plus
CG17571-PA 258 CG17571-PA 57..252 77..271 255 37.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 10:59:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16837-PA 287 GI16837-PA 38..283 34..275 680 52.2 Plus
Dmoj\GI11961-PA 263 GI11961-PA 38..261 50..274 471 40.9 Plus
Dmoj\GI11960-PA 250 GI11960-PA 20..250 50..277 426 40.3 Plus
Dmoj\GI11954-PA 218 GI11954-PA 1..213 66..274 371 37.6 Plus
Dmoj\GI11955-PA 358 GI11955-PA 132..351 48..270 329 36.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 10:59:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26259-PA 274 GL26259-PA 15..273 22..280 729 53.7 Plus
Dper\GL25243-PA 261 GL25243-PA 27..260 41..275 446 39 Plus
Dper\GL25242-PA 254 GL25242-PA 22..240 50..267 409 40.7 Plus
Dper\GL16782-PA 281 GL16782-PA 29..198 48..218 380 41.5 Plus
Dper\GL25239-PA 328 GL25239-PA 92..320 37..269 363 35.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 10:59:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10417-PA 274 GA10417-PA 19..273 25..280 727 54.7 Plus
Dpse\GA17587-PA 255 GA17587-PA 29..254 48..275 548 44.7 Plus
Dpse\GA16803-PA 257 GA16803-PA 23..256 41..275 447 39 Plus
Dpse\GA16805-PA 467 GA16805-PA 259..453 75..267 376 41.3 Plus
Dpse\GA17334-PA 328 GA17334-PA 92..320 37..269 363 35.9 Plus
Dpse\GA16805-PA 467 GA16805-PA 11..252 35..280 209 32.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 10:59:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22176-PA 278 GM22176-PA 1..275 8..282 1391 93.8 Plus
Dsec\GM22175-PA 276 GM22175-PA 1..275 8..280 890 60 Plus
Dsec\GM19492-PA 147 GM19492-PA 1..146 135..280 563 70.5 Plus
Dsec\GM11905-PA 249 GM11905-PA 23..248 48..275 515 42.5 Plus
Dsec\GM14071-PA 248 GM14071-PA 22..246 48..274 435 38.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 10:59:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17559-PA 278 GD17559-PA 1..275 8..282 1313 92.4 Plus
Dsim\GD12154-PA 292 GD12154-PA 41..291 30..280 889 66.1 Plus
Dsim\GD12153-PA 276 GD12153-PA 1..275 8..280 880 59.6 Plus
Dsim\GD11903-PA 249 GD11903-PA 23..248 48..275 517 42.5 Plus
Dsim\GD13344-PA 256 GD13344-PA 10..239 35..263 410 39.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 10:59:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12587-PA 284 GJ12587-PA 20..277 22..275 736 53.1 Plus
Dvir\GJ12185-PA 243 GJ12185-PA 32..241 65..274 471 43.3 Plus
Dvir\GJ12183-PA 250 GJ12183-PA 20..250 50..277 408 40.8 Plus
Dvir\GJ12180-PA 336 GJ12180-PA 86..329 23..270 387 35.7 Plus
Dvir\GJ12181-PA 253 GJ12181-PA 26..246 48..271 378 39.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 10:59:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13475-PA 251 GK13475-PA 2..248 32..277 748 56.3 Plus
Dwil\GK21642-PA 254 GK21642-PA 28..253 48..275 515 41.7 Plus
Dwil\GK19136-PA 252 GK19136-PA 26..251 48..275 476 41.7 Plus
Dwil\GK19135-PA 263 GK19135-PA 28..252 46..269 424 41.4 Plus
Dwil\GK19133-PA 263 GK19133-PA 27..251 48..275 375 41 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 10:59:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22728-PA 273 GE22728-PA 1..273 8..280 1136 75.5 Plus
Dyak\GE22370-PA 273 GE22370-PA 1..273 8..280 1130 75.1 Plus
Dyak\GE22726-PA 276 GE22726-PA 1..275 8..280 910 61.5 Plus
Dyak\GE22367-PA 276 GE22367-PA 1..275 8..280 903 61.1 Plus
Dyak\GE22369-PA 292 GE22369-PA 41..292 30..281 884 64.3 Plus