UFO01014.5prime Sequence
1204 bp (1033 high quality bases) assembled on 2008-07-03
> UFO01014.5prime
GCATAAAACGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCCT
CGCCCAGTGCCGGAAAGCGACGCATGGACAACGATGTGATCAAGCTGATC
GAATCAAAGCACGAGGTGACCATCCTGGGAGGCCTCAACGAGTTCCACGT
CAAGTTCTTCGGTCCAACGGAGACGCCCTACGAGGGCGGCGTGTGGAAGG
TGCGCGTCTACCTGCCCGACAACTATCCCTTCAAGTCACCGAGCATTGGT
TTTGTGAACAAGATCTACCATCCGAACATTGACGAATCCTCGGGTACGGT
GTGCCTGGATGTTATCAATCAGGCCTGGACGGCGTTGTACGATCTATCGA
ACATATTTGAATCGTTCTTGCCGCAGCTGCTCACATATCCCAATCCGGTC
GATCCGCTCAATCGGGATGCGGCCGCATTGTACCTGCACGAGCCGGAGGA
GTATCATCGCAAGGTGGCCGACTATGTGCAGCGCTATGCCACCGAGGACG
CGTTGCGGGCGGCGCAGCAGGAGCGGGAGAGCAGCGACAGCGAGTCGAGC
ATGTCCGACTACAGTGAGGATGAGGCCAGGGACATGGAATTAGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATA
ATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGA
CTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGT
TCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACA
GGAGTCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCG
CAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACA
ACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTG
CGTATATATTTGCCCATGGTGAAACGGGGCGAGAGTTGTCCATATGCCAC
GTTTAATCAACTGGTGAACTCACCCAGGATGCTGAACGAAAACATATTCT
CATAACCCTTTAGGAATAGCCAGTTTTCACCGTACACGCCCATCTGGCGA
ATATTGTGTAGACTGCGGATCGTCTGCATTCACTCCGAGCGATGACCGTT
CAGTGCCTAGACGGTAACAGGTGTACCTTATCCAATTACCACCGCTCCAC
CGGC
UFO01014.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| UbcE2H-RB | 2292 | CG2257-RB | 441..989 | 44..592 | 2745 | 100 | Plus |
| UbcE2H-RC | 2328 | CG2257-RC | 477..1025 | 44..592 | 2745 | 100 | Plus |
| UbcE2H-RA | 2894 | CG2257-RA | 578..1126 | 44..592 | 2745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8089312..8089860 | 592..44 | 2745 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 20:10:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Paris | 1730 | Dvir\Paris TV1 1730bp Derived from Z49253. | 948..1035 | 7..94 | 116 | 59.1 | Plus |
UFO01014.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-03 13:53:14 Download gff for
UFO01014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ubc-E2H-RA | 571..1129 | 36..596 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:59 Download gff for
UFO01014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ubc-E2H-RA | 571..1129 | 36..596 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:11 Download gff for
UFO01014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| UbcE2H-RA | 571..1129 | 36..596 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:11 Download gff for
UFO01014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8089312..8089867 | 36..592 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:59 Download gff for
UFO01014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7983345..7983900 | 36..592 | 99 | | Minus |
