UFO01045.5prime Sequence
1185 bp (1050 high quality bases) assembled on 2008-07-03
> UFO01045.5prime
GCGGCCGCATAATTTCGTATAGCATACATTATACGAAGTTATCAGTCGAC
ATGTACCAGGAATACCTATACCAACTGCGGGCCACCATCACCCCGATGTG
CCACGAGGAGCTGAAGGAACTGCTGAACGATGACGACAAGCTGGACGAGA
AGGTTGACGAAGTTCTCCAGGTGCTCCGAACACAAAAGACCAGTGTTTTC
GAGGACAACAGGAGTCGGGCGGAGCGCAATATCGAGCGGGAGCCGCAGAT
CATCGAGCTGCGGGGGCAGCTGGCAGAACTCTCGGAGGATGGGCGCACCA
GGTGCTCCTCTGTCCAGGAGAAACTCTCACAGCTCAAGGAGAAGTCGGGC
GGAGTGGGCCTTGAAACGGCGCTGGCCCTGCTGCAGACAGCTGCCTCCGA
GAGCGAGGAGCAGACCGAGGAGATGGTCAAGAAGTTCAACGACAGCGATA
TCGGCGTGGAGGACTTTCTGGACGCGTTCCTCCCTATCCGGAGGACCATG
CACCTGCGTCGCCTCAAGGCCGAAAAAATGCAGGAGCTGATGCGCAAACA
GCGCCAGGGTCCGGGCCCAAATACTTCTCTGCCAGCCTACGGAAACGTGC
CCTCCAGCGGATTCTATCCCGCGTCTGGGGGCTCCGCCCCTTACCCAATC
ATGGGTCCCCTGATGCCCATGCCACCGCCATCCAGACCGTACGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATA
ATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGA
CTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGT
TCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACA
GGAGTCCAAGCGAGCTCGATATCAAATTACGCCCGCCCTGCCACTCATCG
CAGTACTGTGTAATTCATTAAGCATTCTGCCGACATGAAGCATCACAAAC
GCATGATGACCTGATCGCAGCGCATCAGCACTGTCGCTGCGTATATATTT
GCCCATGTGAAACGGGGCGAGAGTGTCATTATGCAGGTTTATCAACTGTG
ACTCACCCAGATGCCTGAACGAAACTATTCCATAGCTTAGAATGCCAGTA
CCGTAACGCCACTGTGGCAAATATGTGTGAGAACC
UFO01045.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps37B-RC | 1041 | CG1115-RC | 113..754 | 51..692 | 3210 | 100 | Plus |
| Vps37B-RB | 975 | CG1115-RB | 113..754 | 51..692 | 3210 | 100 | Plus |
| Vps37B-RA | 1024 | CG1115-RA | 113..754 | 51..692 | 3210 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5226270..5226911 | 51..692 | 3210 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:26:20 has no hits.
UFO01045.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-03 13:52:49 Download gff for
UFO01045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1115-RA | 102..761 | 42..700 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:15 Download gff for
UFO01045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1115-RA | 104..763 | 42..700 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:15 Download gff for
UFO01045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps37B-RA | 104..763 | 42..700 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:15 Download gff for
UFO01045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5226261..5226920 | 42..700 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:15 Download gff for
UFO01045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1051983..1052642 | 42..700 | 98 | == | Plus |
