Clone UFO01102 Report

Search the DGRC for UFO01102

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:11
Well:2
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcriptelgi-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO01102.5prime Sequence

1206 bp (1017 high quality bases) assembled on 2008-07-09

> UFO01102.5prime
TGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTCGA
CATGGGCTACGATGTGAATCGCTTTCAGGGGGAGGTGGACGAGGAGCTCA
CCTGTCCCATCTGCTCCGGAGTGCTTGAGGATCCGCTGCAGGCCGTGATG
TGCGAGCACGCCTTCTGCCGCGGATGCATTAACGAGTGGCTAACCCGCCA
GCCCACTTGTCCGGTGGATCGAAATTCCCTGACTACTGCCAACTTGCGGG
CAGTGCCTCGCATATTGCGCAACCTACTGTCCAGACTGTCAATCACCTGT
GACAATGCGCCTTATGGCTGCACGGCTGTTCTCAAGCTAGACGCCTACAA
TTCCCATTTGGACGAATGCATTCACAATCCGAAGCGACCATTTCCCTGCG
AGAAGGGATGCGGCTTTGACATACCCAAGGATGAGCTAAAGGACCACAAC
TGCGTGCGGGAGCTGCGCACTTTAATTGTCAAGCAGACGGAAAAAATGGG
TGAGCTCAAATCGGAGCTCACCGACCAGCAGCTGACTATCAACGAACTGA
AGCGCGAGCTGCAGCTATTCAAGGACTTTATGCGTGCCATGCGCGTCTCC
AATCCTGCGATGCGGGCCATAGCCGACCAGATGGAGCGCGACGAGGTGAT
CCGCTGGAGCAGCACACTGCCCCGGGCCAGGGTTACGCGCTGGGGGGGAA
TGATCTCTACGCCCGACGATGCACTGCAGCTCATGATCAAGCGCGCTTTG
TCCGAGTCGGGCTGTCCGCCACACATCCTGTATAGTCTTATGGAGTTCTG
CCACGAGCGACGTTTGGCCCCGTGGGCTCAGTTCGCTAGAGACACGTCAA
ACCAATCGTAGGATCTACGACAACTATGTGTGTCGACGCATTCCAGGCAA
GCAAGCTGTGCTCGTTTTGAGCTGCGAAAACCTCCACATGACTGAGGACG
TCATGATCGATCCAGGTTTGGTCATGATTTTCGCCCATGGCATCGAAGGC
AAGCTTTCTAGACCATTCGTTGGCCGCCGGGCCAGGTAGTGTTCATATTC
ATAATCATAATCATAATCATAATCACACTAGCCTAGGAAATCCTGTCATG
ACTATGTCTTGCATTCTCACAATAAAACGCCCGGGCGCAAACGGGACGTT
CTGACATCGAATTGCATCTGAAGTCCTATCTGGAATATCAACGGGAAGTC
CAAAGG

UFO01102.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:10
Subject Length Description Subject Range Query Range Score Percent Strand
elgi-RB 1534 CG17033-RB 124..1067 52..996 4655 99.6 Plus
elgi-RA 1611 CG17033-RA 201..1144 52..996 4655 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15957135..15957583 281..729 2245 100 Plus
3L 28110227 3L 15957637..15957805 728..897 785 98.8 Plus
3L 28110227 3L 15956920..15957065 139..284 730 100 Plus
3L 28110227 3L 15957864..15957966 894..996 485 98.1 Plus
3L 28110227 3L 15956750..15956840 52..142 455 100 Plus
Blast to na_te.dros performed on 2014-11-28 23:00:09 has no hits.

UFO01102.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:03:08 Download gff for UFO01102.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17033-RA 201..1150 52..1004 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:17 Download gff for UFO01102.5prime
Subject Subject Range Query Range Percent Splice Strand
elgi-RA 201..1150 52..1004 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:46:49 Download gff for UFO01102.5prime
Subject Subject Range Query Range Percent Splice Strand
elgi-RA 201..1150 52..1004 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:46:49 Download gff for UFO01102.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15956750..15956839 52..141 100 -> Plus
3L 15956923..15957065 142..284 100 -> Plus
3L 15957139..15957583 285..729 100 -> Plus
3L 15957639..15957804 730..896 98 -> Plus
3L 15957867..15957972 897..1004 94   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:17 Download gff for UFO01102.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15949850..15949939 52..141 100 -> Plus
arm_3L 15950023..15950165 142..284 100 -> Plus
arm_3L 15950239..15950683 285..729 100 -> Plus
arm_3L 15950739..15950904 730..896 98 -> Plus
arm_3L 15950967..15951072 897..1004 94   Plus