UFO01104.5prime Sequence
1208 bp (1030 high quality bases) assembled on 2008-07-09
> UFO01104.5prime
GATCTGCGGCCGCATAACATCGTATAGCATACATTATACGAAGTTATCAG
TCGACATGGCCGATGTGGACGATTTTGATTCTCTGTCCAATGCTGAGTTG
CGCGCCAAGATGCTGGCACAGGGGCTGCCCAACATCCCCGTGACGGATAG
CAGCCGGAAGGTTCTAGTAAAGCGTCTGCGCGCCTCCATTGGTGGCCAGG
CGTCGCCGGCCGCTAGTCCCAAGAAGACCAACAGGCGGGAGACCCTGGCT
CCCGCACCTGGTGCACCATCTGCTCCGGCGGCAGCCTCCACGCCGGTGGA
CAAGCTGGATGGCAACAAGGTGGCGCCCGCCACAAAGGCTCGGCGCACAA
TTACCGCTGCAGAGGCCAAGGAACCAGTGCGTCGATTACCCGAGGAAGCT
ATACGCCGACGCCCCGACGAAGCCGACCGCCTACGATCCGAGGAGCCCGT
TGCCGCCAGGAAGCCAACAACTGCTCCTGCTGCTCAACCCGTACAGACCC
GGCGCACTTCCACCTCCTCGGGGTCTGAAAGGAAAGTAGTGGAGCCCTTG
AGGAAGCCAGAAACCATTGTTGAGCAACCGGCTTCCTCGAAGCGCGCTGA
TCGAGAGGAGAATTATCTTAAGGTCAACTCCCTGATTGTCCTAGAGTCCG
ATGAAGAAGAGGACGAGCAGCTAGTCCAGGCTGCAGATCTGGTGGAGCAG
GAGCACGCGGCCAGACAGAAGACCACGAAGCTCGCAAGCAGCGGCACCAC
TACGTACGAGTACAAAAGCAAGGTTGTGGAGCCTCCACGCCGACAGGTCT
ATGAAGCGACAGCAGCTCCCGTGCTGCCGCCATCTGTGCCATCTGCCAGA
GCGCAGACCACCAGTTCCACCAGGTCCTATGACTATGCGAGCAACCCAGC
CCCCCGGTCGCTATAGCAGTTTTGTGCGTACTGCAGCCCAAGGCTATGTG
ACTGCAGAGGCCTCCGCCGGGTGGCCTCCTACTCATCCAGCTACAGCGTA
CCTATGCTAACGAGCTGAGCGACGACACTGAATCCAGGGAAGACCAGTAC
GAAAGCCATTGCCAGGAATCTAGCTCGTTTGCGAGCGAACGGATTGAAAT
CGCCATCAGTCTCGTATTCAGACGCACTCTGGCCCAGTGAACCCGGGTTA
CGTCTCTCGCCTATGACGCGGTGACAGGGGCTCTCTTGCCCCGAGGTATA
ACGGCGCG
UFO01104.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ote-RA | 1571 | CG5581-RA | 99..1242 | 56..1194 | 5105 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18276038..18277079 | 1096..56 | 4835 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:12:34 has no hits.
UFO01104.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:06:05 Download gff for
UFO01104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ote-RA | 109..1209 | 48..1148 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:06:44 Download gff for
UFO01104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ote-RA | 93..1193 | 48..1148 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:36 Download gff for
UFO01104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ote-RA | 93..1193 | 48..1148 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:36 Download gff for
UFO01104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18275985..18277085 | 48..1148 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:06:44 Download gff for
UFO01104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14163490..14164590 | 48..1148 | 97 | | Minus |
