UFO01118.5prime Sequence
1215 bp (1089 high quality bases) assembled on 2008-07-09
> UFO01118.5prime
CTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTCG
ACATGGAGAGTCCTGTAGAGCAACAAGAGGACACAGCCAAGCCAGACGAA
GATCTGCCCAACGAGCAGGTTACACAGTTCCTTCGCCAACTGGTCAGCCA
GCTGTGGCCAGAGCTGGGCGCCAATCCGGAACTGCGTCTGGAAAGGGCGA
GTGCCAAGGGCGACAACTATTTGGGCGTGGTGTGGCGCCTACAGGCGGCA
TCCGATTCGAAACGCAGCCTGGTGGTTAAACTGCCGCCACAGAATCGCGT
GCGCCGCAAGCAATTCTTTGCACGACCATGTTTCCTGCGCGAGACGGCAG
CATATGAGGTCTTTCTGCCGCTGACTGCGTTAATTCAGGATAAGTGGAAG
ATAATCGGAGATGATCGTTTCCGGCAGCACGCGCTCTGTTTCGGAACTCG
CCAGGATGAGCCCAACGAGTGCATCGTGCTGGAGGATCTGTCTTGTGCCG
GCTTCTCACTGCACAATCGCTTTCTCGACCTATCCGTCGAGCATGTGCGT
CGCGTAATGCTCACCTATGCCAAATTACATGCTATATCATTGGCCGGGAA
ACGGCAGTTGCCCGAGAAAATGCAACAACTGCAGCAGCTGGTGGATATCT
TTGAGCAGCGACGCGATGATCATGCCTTGGGGGTCTACTTCGAGAATCTG
AAGGAAAGCGCCCTATCCGCACTGCTCGCACCGGCGGATGATGCATACAG
AGTTCGTCTGGAGGCGTACTTCGCCAGAGGATCGTACTTTGAGCTGCTGC
TGCCTTTGGTCAGCGGATTCAATTGCGAACCCTTCGCTGTTATTTGCCAC
GGCGATTGCTGGAATAACAACATTCTCTACAAGAGTACAGAGCGGGGCGA
GCTCGAGGACGTGCGCCTGATCGACTGGCAACTGATGCGATATGCCTCGC
CGGTCACGATCTAGCTTACTTCCTCTTCACTTGCACTTCGCGGCGATCGC
AGCGACACCTCGAAAATATGCTCGAGGATACTATGAAGAGTGGGCTGCAG
CTGAATAGACTAGGCGAGCGGGTGGAGCACTTTTCCCGTCTGCATCGATG
AAGGTGCTAACAAAGCGGCTGTGGGCCTGCTCTCGCCATGGATGGTCTAC
CATGGACGATGCAGTCAGAGTGTCCGACCTCAGCATTAGCGAGCGTCACT
CAGGCCGGGGGAATC
UFO01118.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:44:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1561-RB | 2160 | CG1561-RB | 631..1799 | 53..1195 | 5140 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11582552..11583545 | 1041..53 | 4775 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:44:21 has no hits.
UFO01118.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:07:50 Download gff for
UFO01118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1561-RB | 608..1730 | 45..1151 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:06 Download gff for
UFO01118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1561-RB | 623..1745 | 45..1151 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:16:35 Download gff for
UFO01118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1561-RB | 623..1745 | 45..1151 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:16:35 Download gff for
UFO01118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11582533..11583554 | 37..1056 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:06 Download gff for
UFO01118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11476566..11477587 | 37..1056 | 98 | -> | Minus |
