UFO01119.5prime Sequence
1213 bp (1064 high quality bases) assembled on 2008-07-09
> UFO01119.5prime
CGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACA
TGGGCTTTGACGAGAAGCGTGAGCCCACCGGCGGCAGACTGCGACTGCAG
GACATTCCGGCCCTCACCCAGGACCACTGCCGCATGCGGGATCCGGCGGA
GGTGGAGCGCATCATCAACGAGTTCGTCATCGGCGGACCAGAGCGCATGC
AAATCGTCTCCGACTTCGACTACACCATCACCAAGCAGCGCACGGAGGAT
GGAGGAGCAGTGCCCTCCAGTTTCGGGATCTTCAACGCCTGCCAGTCGCT
GCCGGAAAACTTTAAGGCGGAGACGGACAAGCTGTACCACAAGTACCGGC
CCATTGAGATCGATCCCCACATGCCCATCGCCGAGAAGGTGCAGTACATG
ATCGAGTGGTGGACCAAGTCTGGCGAACTGACCAGCGGCTTCCCCTTCGA
CCAGTCGGAAATAGATCAGATAGCCAGCAAGTACACGCATGCGCTACGTG
ACCGCACCCACGAGTTCTTTGCGGACCTCCAGCGCTTGGGCATTCCCACG
CTTGTCTTCTCCGCCGGGCTGGGCAACTCGGTGGTCTCGGTTCTTCGCCA
GGCCAACGTTTTGCATCCGAACGTGAAGGTAGTCTCGAACTTTCTTCAGT
TCCGGGATGGCCTTCTAGATGGCTTTCAGCAGCCGATGATACACACCTTC
AACAAGAACGAAACGGTGCTAAATGAGACCAGCGAGTATTACGACTTGGT
GCACACCAGGGACCACATCATAGTCATGGGCGACTCAATTGGTGATGCAG
ACATGGCCTCCGGGGTGCCTGCCTCCTCACACATCATGAAAATCGGCTTC
CTCTTCGACCACGTAGAAGCCAACATGAAGAAGTACATGGACATCTTTGA
CATAGTGCTCGTCGATGACCAGACCATGGACGTGCCCAGGACCCTGCTCT
CCCTCATCGAGAAGCAACACAAGCTGACCTGGAGGCCCCCAAGCAGAGCT
CCCTAGCAAGCTTTCTAGACATTCGTTTGGCGCGCGGGCCCAGGGTAAGT
GATCATATCATATCATAATCATATCATATCACAACTAGCTAGGAGATCTG
TCATGACTAGGGCTTGGATCTCACAATAAAAAACGCCGGGCGGCACGACG
TCGACATTCGGAATGGATTTGAGTTCATTACTTGGATCTCATCACACGAG
AATTCCAAGCGAA
UFO01119.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cN-IIIB-RA | 1530 | CG3362-RA | 375..1331 | 50..1005 | 4745 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24195872..24196828 | 50..1005 | 4720 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:10:56 has no hits.
UFO01119.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:01:35 Download gff for
UFO01119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3362-RA | 326..1292 | 45..1013 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:05:32 Download gff for
UFO01119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3362-RA | 370..1336 | 45..1013 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:40 Download gff for
UFO01119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cN-IIIB-RA | 370..1336 | 45..1013 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:40 Download gff for
UFO01119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24195867..24196833 | 45..1013 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:05:32 Download gff for
UFO01119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20083390..20084356 | 45..1013 | 99 | == | Plus |
