UFO01128.5prime Sequence
1219 bp (1068 high quality bases) assembled on 2008-07-09
> UFO01128.5prime
CCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGC
CGCACAACAACCAGCCGTCTCCCGGGGATGATCAGTTGGGACCGCCAAAG
GCGGACTTCAGTGCTCCGCCACCGTACGAGGCGAACGTTGGCCATGGCCA
GCAGGTAGCACTGCCGGCTCAGATGCCACCGCTGGCCTTGGCCACACCCG
ATCCCAGTCAGATCCCGATACAGATGCAAGTGCAGCTGCCGAGCCAGGCG
GACCTTATGAATGCACAACTGCCGCCAGAAATACACGGGAAGTTGCCCAC
GTACGAGGAGGTTCAAATGGAAAAGTCGCTGAACGGAGAGCTGCCGCCCG
CCTTTTTGACTTTACCCTCCTCGCAGCAGCTACCGCCGCCGCCGAATCCG
CTACTGCCGCCAAATCCGCTGCGCGATGGAGCCGCTGCTGTGCGATCTGC
CCAGCCGGCACTCACGTTCATCGCCATCGATGCCAGCGATCCGGAAAATA
GTCTGTCCACCACCGACAACTTGCTCGGCACGGACATCATGTTCATCACG
GCCTTCATTGTGGCCTTTTTGTTTAACTGGATCGGCTTCCTGATGCTCAC
CTGTTTCTGTCACACAATCGCCGCCCGATATGGAGCATTGTCGGGATTCG
GATTGTCGCTGGCTAAATGGACGCTGATCGTGAAGCACTCGACGGACTTG
GCCTCGCACGAAAACTCCTGGCTCTGGTGGCTGATCTGTGCCTTTGGCTT
CCTGATCAGCATACGCGCTTTAATACAGTATGTCAGCATCAAGCGATCGT
GGCGCCTCCTTTCCGCCTCTGCCCAGGAACGGCTGCTATTCTTTTACGCA
AGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAA
TCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGTC
ATGACTAGTGCTTGGATTCTCCACAATAAAAAACGCCCGGCGGCAACCGA
GCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATC
ACAGGAGTCCAGCGAGCTCGATATCAAATTACGCCCCGCCTGCCACTCAT
CGCAGTACTGTTTGTATTCATTAGCAATTCTGCGACATGTAGCATCAACG
GCATGATGACCTGAATTCGCCAAGGCATCAGCACCTTGTGTACGCGCCAC
TGGGGCCGGATATAATAAT
UFO01128.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ndfip-RA | 2094 | CG32177-RA | 291..1092 | 46..847 | 4010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17648444..17649245 | 847..46 | 4010 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:18:02 has no hits.
UFO01128.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:06:10 Download gff for
UFO01128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32177-RA | 284..1088 | 40..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:17 Download gff for
UFO01128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ndfip-RA | 288..1092 | 40..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:18 Download gff for
UFO01128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ndfip-RA | 288..1092 | 40..847 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:18 Download gff for
UFO01128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17648444..17649252 | 35..847 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:17 Download gff for
UFO01128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17641544..17642352 | 35..847 | 99 | | Minus |
