UFO01137.5prime Sequence
1211 bp (1046 high quality bases) assembled on 2008-07-09
> UFO01137.5prime
TCTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTC
GACATGTCGTTCATCACACGGGAATACAAGTTTGAGAGCAGCAAGGTGAT
GGAGCCGAAATCAGATCAGCACACGATGGCCATGCGGAGTCTGAGGAAAC
TGGTCAAACCCCTTCTGCGACTGGTGAAGAAGAAGCAGCTACTCCGGAAG
ACTCTGGCCGAGATCCAGAACCAAAATGCAGTCAACGCCTCGCTGGAGGA
CATGCGCAAAGATCCGGCGGCCAGTTGCGATAACATGGCCAACGAGGAGC
TGGAGCAGCGACTGTACACCGATCTCCGCCAGTGCCCCACCAACGTGGCC
ATGATCGTGCAGCAGGGTCAGCAACAGAGCATCGTGCCCGTCCATCCGGA
GCAGACCTTCATCCCGGTCCACTTCGCCCGCACCACCAGCGGCACCTTCT
TCTGGACCTCAGCCGAGGGAGCTCGCCAGCACCACGAACAGCAGTTGCGC
CAGCAGTTCGACCGTTGGGTTCAGGCCGCAAGCTTTCTAGACCATTCGTT
TGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATC
ATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTC
TCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAG
ATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGC
TCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAA
TTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAA
CCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTG
CCCATGGTGAAAACGGGGGCGAAGAGTTGTCCATATTGGCCACGTTTAAA
TCAAAACTGGTGAAACTCCACCCAGGGATGGCTGAGACGAAAAACATATT
CTCAATAAACCCTTTAAGGAATAGCCAGGTTTTCACGTACACGCCACATC
TGCGATAATGTGTAGAACTGCGGAATCGTCTTCCATCACTCAGAGCGATG
AAACGTTCAGTTTGCTCATGAACCGGTGTACAAGGCAACCTTTCCATTTC
ACAGTCACGTCTTCATGCCATACGAAATTCGGGGATAGAACATACCACAC
CAGGGCGGGGC
UFO01137.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tom-RA | 963 | CG5185-RA | 84..557 | 54..527 | 2370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14969427..14969900 | 54..527 | 2370 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:41:34 has no hits.
UFO01137.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 14:59:14 Download gff for
UFO01137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tom-RA | 73..557 | 45..531 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:55 Download gff for
UFO01137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tom-RA | 76..560 | 45..531 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:32 Download gff for
UFO01137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tom-RA | 76..560 | 45..531 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:32 Download gff for
UFO01137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14969419..14969900 | 45..527 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:55 Download gff for
UFO01137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14962519..14963000 | 45..527 | 99 | == | Plus |
